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Properties
| Property Name | Value |
|---|
| Product | fkbp-type peptidyl-prolyl cis-trans isomerase |
| Orig transcript id | gnl|cribi|Naga_100136g6.3176.mrna |
| Orig protein id | gnl|cribi|Naga_100136g6.3176 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:412542..413946 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1349 ID=rna1349|Name=rna1349|organism=Nannochloropsis gaditana|type=mRNA|length=1384bp
AGGATCGAACGACGATGTGTTCCTGTAGGCAAACAGCCAGGATCCTGTTA
TCCCGTGCAACAAAAAAGGCTTCTGATAAATCCAATACATGTCCTCCACA
GCAGCGTTGGTATCAGGGAGACTAGCATGGAACGGTTCTTCGGCAGTTTT
GTGCCCACAACACGCGAGTACGTCTCCTTTAAAGCAGGACGGTGCGACGT
GGAAGATAAGGGGAATAACAAATTCTTGATTACGCCTGATCGACGCAAGG
GACAACTTACTCTCTTGAAGCATGTAGACGAGCTCACCCACCTGCAATGG
AAAGACCGAACGACCAATACGGTCGTGGAGGACGTGATTGTCATGCCGCA
TGACGCACACTTCACACGAGTAAACACCGGCCGCACCAAAGATCGCGTGT
ACATGTTACAATATCAAGGAGGGTCCTCGCGACGCTTCTTTTTTTGGATG
CAAAGTGCCTCCGACGAAAAGGACGAAGAAGTCGTAACGCGTTTGAACAC
GTGCATGGCTGAACCACCAGCCGAAGACACCTCAATGGGTGGAGATGATA
GCACAGAAGGAGGCGCAAGTGGGGCAGGTGGCGGCGCCTCGGACGCCTCA
CCCTCTCAGCAAAACGTGGAAGACTTGCTGTCATCCATGCTCGGCCCTGG
GGCCACGTCAGGTCAGTTTCGTGCCCCCGCGCCCTCAATCGCCCCCACTG
CCCCCGCCTCGGGAAGCAGCAGCGCCGGTGCCGTCGGTCGAGGGGGCCAG
TTGACAGCGGCAGACTTGCAGCGGGCCATGATGAACCTGACAGGCCGACA
GCCACAGCCCCCGCAGTCGGTGCCCTTAACGGAGGTGCTCAGCGCCGACC
AAGTCCTCCGCTCTGGCATCCTAGCCGACCCCGCCGTCCAAGAGCAACTA
ATCCCGCTCCTACCGGAGGGGCAGCAGACCCCGGAGCAGCTGGAGGCGAT
CGTGCGCAGTCCCCAATTGCGCTCGAGCCTGGCGTCCTTGACCGGTGCCC
TCCAGACGGATAACTTTAATGCCATCGTGTCCAATTTTGGCCTTGACCCT
TCCCGGGGCATGGAAGCCCTGGCCGCGGGGAATAATGTAGAAGCCTTTCT
ACAGGCGCTCTTGGCCTTGCGGCAGGAAGGGGAGGGCTCGGATTCAAGGG
GGGGGGGAGAGGGGAAGGAGGAGGGGCGGGAATACAAAGAGGAATAGTAA
ACGAAGATTGCATAGAAGGAAAGGGACATGGCGAAGAGGGCTTGTTCAGA
AAAACGTTATGAAGGTCCAAATGTAGAGTGTTGGAATCATGCGCAAAGTA
CCGACAGCTTTCTCCCACGCATCTTCCAGGTAGTTTTTCCTGAACCAGTC
AATGTAACCGAAACAGTCTTTCATCCTTTTCTCC back to topprotein sequence of rna1349 >rna1349-protein ID=rna1349-protein|Name=rna1349|organism=Nannochloropsis gaditana|type=polypeptide|length=363bp
MAPPGRYQKTCDRRRIPSHRLLLFVHSVVVVVLLSNRSAAFQHVNPPISI
FERRKTTFPDGSGRFQAMSDDKTDFFNTSSCLHDSSSGPRAASLRSSHHN
SFARIKGSQSTRGDFLRQGLLTAGGAAMGAFFSPDPDFPRRPRHAHAAAN
RVQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPF
SKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLEL
GYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEA
DLGYYDDLTFDPGYLQEGMAKSLQELRDKGVKVPSTKSFMTKPEILGSRR
QEIELNGLPENMQ back to topmRNA from alignment at CM002457.1:412542..413946+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1349 ID=rna1349|Name=rna1349|organism=Nannochloropsis gaditana|type=mRNA|length=1405bp|location=Sequence derived from alignment at CM002457.1:412542..413946+ (Nannochloropsis gaditana)
CTAAACCATCACGTCATCAGGAAGGGGACTAAAGTGGAGGGAGTTGCGGC
CTAAACCATCACATCATAAGGAAGGGGActaaaggggagggagttgcGGC
CTAAACCATCACATCGACCAGCCAAGACAAGAGGAACTTCACGTACCTGC
GTGGGCCGCACAGCGTCGACACGAAAGCCACCAGAGCATTGCTTGCGTCC
TGGAATATTAAGAAGCTCAAAATTTTACTGTTTTTCAAACAGGTGTTCCT
TGACACTGGACATGGCGCCTCCAGGACGTTATCAAAAGACTTGTGATCGT
CGACGGATACCATCCCACAGGCTTCTCTTGTTCGTCCATTCTGTCGTCGT
AGTAGTTCTTTTGTCCAACAGATCAGCCGCGTTCCAACACGTAAATCCAC
CAATATCTATTtttgagaggagaaagacaaCTTTCCCGGACGGTAGCGGC
AGATTTCAAGCAATGTCGGACGACAAAACAGACTTCTTCAACACATCAAG
TTGTCTACACGACTCCAGCTCCGGCCCACGCGCCGCTTCCTTGCGGAGCT
CTCACCATAACTCATTTGCTAGAATAAAGGGATCACAAAGCACTCGCGGC
GATTTTTTGCGGCAGGGCTTATTGACAGCGGGTGGGGCTGCAATGGGTGC
CTTCTTTTCACCTGATCCCGACTTCCCCCGGCGACCTCGTCATGCTCATG
CAGCAGCCAATCGTGTGCAAGACATGGACCTTCCAGCGGTGGCTTTTGAA
ACCAAAAGCGGGCTGCGGTACTACGATGTTCGAAAAGGTGAAGGTATGAG
TCCGAAGTGGGGCCAAGTGGCGATTATTCAATATGAGGGCTACGTACGGg
cctcgcctttttccaaGCTTGTGCTATTCGACGACACCTACGCCCGTAAA
ACGCCATACCTGGTCAAGCATGGCAATGGTAGGGTCATTCGTGGACTGGA
CGAAGGCATCCACTCCATGAAATTAGGCGGCCTTCGTCGAATCGTTGTGC
CTCTTGAGCTGGGTTATACAAAGACGGGCCTGGGCCCACTGCCGCCCAAC
GCTTTTCGCCGTAAAATCCTGGTGAGAGAGCTAGGAAAGGCAGAGGTGAA
CGATCCTCCAGGAGAAATAATTTACGACGTGGAGCTGGTGTCTCTGTATG
ACGATGAGGCCGACTTGGGGTACTACGATGATTTGACATTTGATCCAGGC
TACTTGCAGGAAGGGATGGCGAAAAGTTTGCAGGAATTGAGGGACAAAGG
GGTGAAAGTACCCTCCACTAAGAGCTTCATGACAAAACCCGAGATTTTGG
GAAGTCGGCGGCAGGAGATCGAGCTAAATGGGCTACCGGAAAATATGCAA
TAAGGCCAAAACCGGCACTCATTTGAATAAAAGTAATTTCATGCTTTTCt
actcc back to topCoding sequence (CDS) from alignment at CM002457.1:412542..413946+ >rna1349 ID=rna1349|Name=rna1349|organism=Nannochloropsis gaditana|type=CDS|length=1092bp|location=Sequence derived from alignment at CM002457.1:412542..413946+ (Nannochloropsis gaditana)
ATGGCGCCTCCAGGACGTTATCAAAAGACTTGTGATCGTCGACGGATACC
ATCCCACAGGCTTCTCTTGTTCGTCCATTCTGTCGTCGTAGTAGTTCTTT
TGTCCAACAGATCAGCCGCGTTCCAACACGTAAATCCACCAATATCTATT
tttgagaggagaaagacaaCTTTCCCGGACGGTAGCGGCAGATTTCAAGC
AATGTCGGACGACAAAACAGACTTCTTCAACACATCAAGTTGTCTACACG
ACTCCAGCTCCGGCCCACGCGCCGCTTCCTTGCGGAGCTCTCACCATAAC
TCATTTGCTAGAATAAAGGGATCACAAAGCACTCGCGGCGATTTTTTGCG
GCAGGGCTTATTGACAGCGGGTGGGGCTGCAATGGGTGCCTTCTTTTCAC
CTGATCCCGACTTCCCCCGGCGACCTCGTCATGCTCATGCAGCAGCCAAT
CGTGTGCAAGACATGGACCTTCCAGCGGTGGCTTTTGAAACCAAAAGCGG
GCTGCGGTACTACGATGTTCGAAAAGGTGAAGGTATGAGTCCGAAGTGGG
GCCAAGTGGCGATTATTCAATATGAGGGCTACGTACGGgcctcgcctttt
tccaaGCTTGTGCTATTCGACGACACCTACGCCCGTAAAACGCCATACCT
GGTCAAGCATGGCAATGGTAGGGTCATTCGTGGACTGGACGAAGGCATCC
ACTCCATGAAATTAGGCGGCCTTCGTCGAATCGTTGTGCCTCTTGAGCTG
GGTTATACAAAGACGGGCCTGGGCCCACTGCCGCCCAACGCTTTTCGCCG
TAAAATCCTGGTGAGAGAGCTAGGAAAGGCAGAGGTGAACGATCCTCCAG
GAGAAATAATTTACGACGTGGAGCTGGTGTCTCTGTATGACGATGAGGCC
GACTTGGGGTACTACGATGATTTGACATTTGATCCAGGCTACTTGCAGGA
AGGGATGGCGAAAAGTTTGCAGGAATTGAGGGACAAAGGGGTGAAAGTAC
CCTCCACTAAGAGCTTCATGACAAAACCCGAGATTTTGGGAAGTCGGCGG
CAGGAGATCGAGCTAAATGGGCTACCGGAAAATATGCAATAA back to top
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