EWM29325.1, cds1347 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|585111851|gb|EWM29325.1| (fkbp-type peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 746.117 bits (1925), Expect = 0.000e+0 Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0
Query: 1 MAPPGRYQKTCDRRRIPSHRLLLFVHSVVVVVLLSNRSAAFQHVNPPISIFERRKTTFPDGSGRFQAMSDDKTDFFNTSSCLHDSSSGPRAASLRSSHHNSFARIKGSQSTRGDFLRQGLLTAGGAAMGAFFSPDPDFPRRPRHAHAAANRVQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQEGMAKSLQELRDKGVKVPSTKSFMTKPEILGSRRQEIELNGLPENMQ 363
MAPPGRYQKTCDRRRIPSHRLLLFVHSVVVVVLLSNRSAAFQHVNPPISIFERRKTTFPDGSGRFQAMSDDKTDFFNTSSCLHDSSSGPRAASLRSSHHNSFARIKGSQSTRGDFLRQGLLTAGGAAMGAFFSPDPDFPRRPRHAHAAANRVQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQEGMAKSLQELRDKGVKVPSTKSFMTKPEILGSRRQEIELNGLPENMQ
Sbjct: 1 MAPPGRYQKTCDRRRIPSHRLLLFVHSVVVVVLLSNRSAAFQHVNPPISIFERRKTTFPDGSGRFQAMSDDKTDFFNTSSCLHDSSSGPRAASLRSSHHNSFARIKGSQSTRGDFLRQGLLTAGGAAMGAFFSPDPDFPRRPRHAHAAANRVQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQEGMAKSLQELRDKGVKVPSTKSFMTKPEILGSRRQEIELNGLPENMQ 363
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|298715511|emb|CBJ28081.1| (FKBP-type peptidyl-prolyl cis-trans isomerase [Ectocarpus siliculosus]) HSP 1 Score: 155.221 bits (391), Expect = 1.006e-40 Identity = 75/170 (44.12%), Postives = 110/170 (64.71%), Query Frame = 0
Query: 148 AANRVQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQE 317
AA ++ ++P V TK+G++Y+D R GEG SP+WGQ II++ Y R++P KL+ + K YL KHGNG I+G++EG+HSM++GG RR+++P +GY+ GLGP P + +R ILV L E GE++ D+EL+ +DDEAD GYY+D P LQ+
Sbjct: 106 AAGMQEEEEVPTVGKITKAGIKYFDFRVGEGPSPRWGQDCIIRFTMYGRSTPDEKLIKIQSSDNNKEKYLFKHGNGFQIKGMEEGMHSMRVGGKRRVIMPQSMGYSVQGLGPYPADPRKRDILVEVLTSFE-KTTTGELVMDIELLDAFDDEADQGYYEDTAVTPEQLQD 274
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|397615891|gb|EJK63695.1| (hypothetical protein THAOC_15633 [Thalassiosira oceanica]) HSP 1 Score: 138.658 bits (348), Expect = 5.638e-35 Identity = 71/151 (47.02%), Postives = 95/151 (62.91%), Query Frame = 0
Query: 162 FETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDP 312
F+T SGL+Y ++R+G G SPK+G I Y YV+ S+ D + YL+KHGNGR I GLDEG+H+MK+GG RRI++P +LGY GLGPLP + R L R L K V G ++ DVE+ S+ +DEAD GYY+D + P
Sbjct: 106 FKTNSGLQYIELREGSGESPKYGNFVTIAYRAYVKLPDTSEKKFDLDEFDSDKAYLIKHGNGRTIPGLDEGLHTMKVGGKRRIIIPPKLGYVTNGLGPLPVGPYGRFKLYRLLEKM-VEYRGGNVVVDVEMKSIMEDEADQGYYEDDSLSP 255
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|223996725|ref|XP_002288036.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977152|gb|EED95479.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 138.658 bits (348), Expect = 1.054e-34 Identity = 78/205 (38.05%), Postives = 117/205 (57.07%), Query Frame = 0
Query: 133 SPDPDFP------RRPRHAHAAANRVQDMDLPAVA-FETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDP---GYLQEGMAKSLQELR 327
+P+P F P+ ++ ++D +V F+TKSGL+Y D+ +G G SPK+G I Y+ +++ D + +LVKHGNGR + GLDEG+H+MK+GG RRI+VP +LGY +GLGP+P + R L R L + V G +++DVE+ S+ +DEAD GYYDD + P L++ + S Q R
Sbjct: 95 NPNPSFADIEGVVSVPQSTTPPESKASNLDGKSVTVFKTKSGLQYIDLVEGTGASPKYGNFITISYKAFIKLPDIQGKKSEFDEFDSDKGFLVKHGNGRNVPGLDEGLHTMKVGGKRRIIVPPKLGYVSSGLGPIPVGPYGRWKLNRLLDRM-VEAKGGNVVFDVEMKSILEDEADQGYYDDDSLSPDDFNTLRQNIESSQQASR 298
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|160331627|ref|XP_001712520.1| (fkbp-like protein [Hemiselmis andersenii] >gi|159765969|gb|ABW98195.1| fkbp-like protein [Hemiselmis andersenii]) HSP 1 Score: 129.028 bits (323), Expect = 8.813e-32 Identity = 76/207 (36.71%), Postives = 111/207 (53.62%), Query Frame = 0
Query: 90 RAASLRSSHHNSFARIKGSQSTRGDFLRQGLLTAGGAAMGAFFSPDPDFPRRPRHAHAAANRVQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPP-NAFRRKILVRELGKAEVNDPPGEIIYDVELVSL 295
+A+ +S +F+ + TR +F G F + DF ++ A N ++ ++AF TKSGL+ D GE P+WG II Y Y +S K+ DTY + TP+L HG G+ I+GL+E +HSMK GG RR+V+P ELGY GLGP+PP N+ R+K+L +E E+ + II D+ELV +
Sbjct: 24 KASDDKSITMKNFSNSFSEKITRKNFF--------GKFWFCFSTIGIDFSFENKNFAMAEN----LEKNSLAFSTKSGLKIIDFLPGEAQMPQWGDFVIINYVLYKNSS--QKIEKISDTYQKNTPFLFIHGGGQTIKGLEEAVHSMKKGGKRRVVIPQELGYNVPGLGPIPPENSKRKKLLSQE----ELENKSSNIILDIELVDI 212
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|1189388739|gb|OSX75750.1| (hypothetical protein BU14_0223s0022 [Porphyra umbilicalis]) HSP 1 Score: 129.413 bits (324), Expect = 2.801e-31 Identity = 68/159 (42.77%), Postives = 93/159 (58.49%), Query Frame = 0
Query: 158 PAVAFETKSGLRYYDVRKGEG-MSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYL 315
P F T SGLRY+D G G P WG + + Y Y + +L + D TYARK LV HGNG+ I G++E +H M+ GG RR+V+P LGYT +GLGP+PP +R+ L + L N+ G +++D+ELV++ D D G Y DLT P L
Sbjct: 121 PETGFVTNSGLRYFDFAVGSGDRRPVWGDLLTVSYVLYTVSPEGDRLDIADSTYARKQHMLVHHGNGQTILGVEEALHGMRAGGRRRVVIPPSLGYTSSGLGPVPPRTTKRRALNKAL-----NEGNGLVVFDLELVAVLPDTNDTGLYTDLTPAPADL 274
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|922854608|gb|KOO23127.1| (amine oxidase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 122.479 bits (306), Expect = 4.267e-27 Identity = 75/192 (39.06%), Postives = 106/192 (55.21%), Query Frame = 0
Query: 117 RQGLLTAGGAAMGAFFSPDPDFPRRPRHAHAAANRVQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDL 308
R+ LT GG M A P+P AA+ + + T+SGL Y D ++G G +P++GQ+ Y GY + LV FD +Y R++ YLVKHGNG +G++E +H+M++GG RR+V+P LGYT GP+PP A R L + E +I+D+ELVS+ DD D G YDDL
Sbjct: 22 RRVWLTLGG--MAAIALPNP--------TSAASGPISE------GVRTRSGLLYMDFKEGSGSTPRFGQLLRFHYVGYAPNTQKRTLVSFDSSYDRRSAYLVKHGNGFTCQGIEEALHTMRVGGRRRVVLPPALGYTADK-GPMPPGAGARSKLFDAVTAGE------PLIFDLELVSIMDDLLDRGDYDDL 190
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|399949701|gb|AFP65359.1| (fkbp-like protein (nucleomorph) [Chroomonas mesostigmatica CCMP1168]) HSP 1 Score: 114.005 bits (284), Expect = 5.057e-26 Identity = 62/158 (39.24%), Postives = 92/158 (58.23%), Query Frame = 0
Query: 152 VQDMDLP-AVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDL 308
+ D DL AF TKSGL+ + +GEG +P+WG + +I Y Y +P L D T+ R P+L HG G+VIRG++E +H MK+GG RR+++ E GY LGP+PP ++RK L E K E + I++D+ELV + + LG + +
Sbjct: 71 IADDDLKNKKAFSTKSGLKILEFTEGEGKAPEWGNLLVINYVIY-ELTP-KGLDQIDSTFGRNQPFLFAHGGGQVIRGIEETVHDMKMGGKRRVILSEETGYVNPTLGPVPPLNYQRKKLF-EKNKNEFLENKKLIVFDIELVDIKKNIHTLGNFSNF 225
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|545712972|ref|XP_005708790.1| (immunophilin isoform 1 [Galdieria sulphuraria] >gi|452825272|gb|EME32270.1| immunophilin isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 112.849 bits (281), Expect = 1.482e-25 Identity = 61/151 (40.40%), Postives = 83/151 (54.97%), Query Frame = 0
Query: 161 AFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFD 311
F+T G Y D R G G SP WG + +I Y Y +L F TY K P+ +HGNG+ I+GL+EGI SMK+GG RR+V+P L Y+ GLGP+PP+ R+ L L + V + DVEL+ ++ D + YY D D
Sbjct: 99 VFKTSGGTEYVDFRVGSGDSPAWGDMVVIHYVIYTVEG--GQLRKFYSTYDDKQPFAFRHGNGQTIKGLEEGIDSMKVGGRRRMVIPGSLAYSVAGLGPIPPSTSVRRKLADSLKQGNV------LSLDVELLKIWKDPVGMEYYSDFVPD 241
BLAST of EWM29325.1 vs. NCBI_GenBank
Match: gi|545712974|ref|XP_005708791.1| (immunophilin isoform 2 [Galdieria sulphuraria] >gi|452825273|gb|EME32271.1| immunophilin isoform 2 [Galdieria sulphuraria]) HSP 1 Score: 109.383 bits (272), Expect = 4.838e-24 Identity = 63/160 (39.38%), Postives = 86/160 (53.75%), Query Frame = 0
Query: 161 AFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVREL--GKAEVN------DPPGEII-YDVELVSLYDDEADLGYYDDLTFD 311
F+T G Y D R G G SP WG + +I Y Y +L F TY K P+ +HGNG+ I+GL+EGI SMK+GG RR+V+P L Y+ GLGP+PP+ R+ L L GK + G ++ DVEL+ ++ D + YY D D
Sbjct: 99 VFKTSGGTEYVDFRVGSGDSPAWGDMVVIHYVIYTVEG--GQLRKFYSTYDDKQPFAFRHGNGQTIKGLEEGIDSMKVGGRRRMVIPGSLAYSVAGLGPIPPSTSVRRKLADSLKQGKRAIQCDTFYLKQIGNVLSLDVELLKIWKDPVGMEYYSDFVPD 256 The following BLAST results are available for this feature:
BLAST of EWM29325.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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