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Properties
| Property Name | Value |
|---|
| Product | Rubisco LS methyltransferase, substrate-binding domain protein |
| Orig transcript id | gnl|cribi|Naga_100013g90.9768.mrna |
| Orig protein id | gnl|cribi|Naga_100013g90.9768 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:351997..353717 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna134 ID=rna134|Name=rna134|organism=Nannochloropsis gaditana|type=mRNA|length=459bp
ATGGGGATAAACTCGAAGGAATTGCGGAATCGCAGCACGCAGCAAGGGGC
TGGAGAAGGCACGTGCTGGGGCGAAGAGGGTGGAAAGAGTGAGGAAGCGA
GAGACAGGAGGGGAACAAAGCAGGAGGTTGGACGAACGGAAGGAGAAGAA
GAGGCACCGTACATATGGGAGGATCAACAAGAGATAGAACGGGAAAAGCA
CCAGTTTAGACCTGTCTGTCGTTTAAGCGACTGCCCCGACAAATCAAAAT
TATTAGATAAGGACAGCAAGTCGTTGGACGTGTGGGACCGGAGGATCGTG
TTGGGGCTGCTGATGGGCGCTCTTTATACAATTCTGACATTGTGGGTAAT
GGAACGAAGCGCTAAAATGGTGGCAGGGAGGGACGGGCCTGCGGTCGACA
TCCAAAGGACGCCGTCCTTGGTTTTCCCTTTCCATTCTCCTGAAGGAATG
AATCGTTAG back to topprotein sequence of rna134 >rna134-protein ID=rna134-protein|Name=rna134|organism=Nannochloropsis gaditana|type=polypeptide|length=515bp
MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTET
QDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGET
LATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPK
SKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAE
DYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPL
LDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSG
IEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGL
PMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELP
VSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEA
LARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDE
YVDGSGGRRTSNLDW back to topmRNA from alignment at CM002455.1:351997..353717- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna134 ID=rna134|Name=rna134|organism=Nannochloropsis gaditana|type=mRNA|length=1721bp|location=Sequence derived from alignment at CM002455.1:351997..353717- (Nannochloropsis gaditana)
ACAGGCGCCACAAAAGCAATGAGAAGTTGTATATCTCCACTCATAGTGCT
CTTTGCAACGCTGCTTTGCAATGTCGACTCGTTCTTGGTTCCAGCTCCCA
CCATTGCATCCGCCTGCTCATCCCAACCTGCGATGGCGGCTGCTGCGAGC
ACAAGCAGCACGGAAACACAGGACCGTGCCGCCGTGGTGCCTCAGTTACT
AGAGTGGTGTAATAAGAATGGTATCAAAGATGCCAGTAAGATCACCATCG
GGCCCGTGAGCCAGGCGGGGATGGGTTTGGGGTTGGTGGCCACTGCCCCA
ATCAAGCAGGGGGAAACACTTGCCACTGTTCCTCTTAACTTGTGCTTCTC
CATGGACAGCGTTCGTGCCTCCCCCTTGGGCAAGGTAATAGGAGAATTTG
AGCCAGCTCTGGGAGACGCATCCCTGATAGCACTCCAACTCTTGTACGAA
GCGCACATGGGACCTAAATCCAAGTATGCTGTCTACATCAAAAGTCTTCC
CCGCCCCGGGCAGGATGGCTTTGATCATCCGCTTTTCTGGTCCACCGCCG
AGCAGGGCGTGCTCGCCAAGTCATCCACACGCAATCTTGGAGAGACCTTG
ATAGATGCCGTAGCCGAGGATTACGGATGGATTCAAAGCGCCCTTGCCCG
AGGGGGCATCTCAGGCCTTCAGGCTGACAGTTTTGACCTGAGCGATTTTG
AGTGGGCGGTGGCCGTGGTCCTCTCCCGCTCTTTTTTTGCCGAGAATGGT
TTACGTCTCGCCCCTCTTTTGGACATGGCAAACCGAGGAGAAGGCTGCAC
GAACGAACCACAGATTGGAGGGCTGGGGATTTTTGGAGGAAAAGGCCTTA
AAGTGATCGCGGACCGGGACACGGACAAGGGTCAGGAGATCGTCATTTCC
TACGGACCGAAAAGCGGGATCGAATTTCTAGAAGATCACGGCTTTGTACC
TCCGCCGTTGGAGGGGAACGCATTGGTCGGGGGGATGTGCTCACTCACCT
TTAAAATCTCGCCGGAGGGGGACAGGTTCTATGACGACAAGGAGGACGTG
ATGGGTACATTGGGGCTGCCCATGGCCTTCTCCTTCGACGTCCGGAGCGA
TGGCGACGTCGACCCGGAGATGCTCCAATTTTTAAGGTTTCTGAAGCTGG
GAGGAAAAGACGCGTTCCTGCTAGAGGCTGTATTCCGCAACGAGGTCTGG
CGATTCATGGAACTCCCGGTGAGCGAGGCGAATGAGCAAGCAGTGGACGA
GGTCATCATCGATGCCTGCACACAAGCCTTGGCCAATTTTGCGGAAGCAG
AGGTCTTGACAGACGAACTTATCCAAAAAGAGGGGGTGAGCCCATTGACG
ATTGCCAGGATGGAGGCCCTGGCACGGTTACGGGAGTCCGAGAAAGGGGC
TTTGGTGGCCACACAGGCCTGGGCGAATCGGGACCTGATGACGAGCGATT
TGAAGGTATACTACCAAGAAAGACGGCTGGAGGAGCTACAACTCTCGGGG
CCCCTGACCGATGATGAGTACGTGGACGGCTCGGGGGGCCGGCGGACGTC
GAACTTGGATTGGTAGAAAAGCGCGGCGGGCAGGAGGGGCGAATGACGAA
TGATGACTTGAAAGTGAATGAAACCTTTGAGTGATAGAAGCGTATCAAAG
CAGCCCACCGAGTATCTGCCTAACGATTCATTCCTTCAGGAGAATGGAAA
GGGAAAACCAAGGACGGCGTC back to topCoding sequence (CDS) from alignment at CM002455.1:351997..353717- >rna134 ID=rna134|Name=rna134|organism=Nannochloropsis gaditana|type=CDS|length=1548bp|location=Sequence derived from alignment at CM002455.1:351997..353717- (Nannochloropsis gaditana)
ATGAGAAGTTGTATATCTCCACTCATAGTGCTCTTTGCAACGCTGCTTTG
CAATGTCGACTCGTTCTTGGTTCCAGCTCCCACCATTGCATCCGCCTGCT
CATCCCAACCTGCGATGGCGGCTGCTGCGAGCACAAGCAGCACGGAAACA
CAGGACCGTGCCGCCGTGGTGCCTCAGTTACTAGAGTGGTGTAATAAGAA
TGGTATCAAAGATGCCAGTAAGATCACCATCGGGCCCGTGAGCCAGGCGG
GGATGGGTTTGGGGTTGGTGGCCACTGCCCCAATCAAGCAGGGGGAAACA
CTTGCCACTGTTCCTCTTAACTTGTGCTTCTCCATGGACAGCGTTCGTGC
CTCCCCCTTGGGCAAGGTAATAGGAGAATTTGAGCCAGCTCTGGGAGACG
CATCCCTGATAGCACTCCAACTCTTGTACGAAGCGCACATGGGACCTAAA
TCCAAGTATGCTGTCTACATCAAAAGTCTTCCCCGCCCCGGGCAGGATGG
CTTTGATCATCCGCTTTTCTGGTCCACCGCCGAGCAGGGCGTGCTCGCCA
AGTCATCCACACGCAATCTTGGAGAGACCTTGATAGATGCCGTAGCCGAG
GATTACGGATGGATTCAAAGCGCCCTTGCCCGAGGGGGCATCTCAGGCCT
TCAGGCTGACAGTTTTGACCTGAGCGATTTTGAGTGGGCGGTGGCCGTGG
TCCTCTCCCGCTCTTTTTTTGCCGAGAATGGTTTACGTCTCGCCCCTCTT
TTGGACATGGCAAACCGAGGAGAAGGCTGCACGAACGAACCACAGATTGG
AGGGCTGGGGATTTTTGGAGGAAAAGGCCTTAAAGTGATCGCGGACCGGG
ACACGGACAAGGGTCAGGAGATCGTCATTTCCTACGGACCGAAAAGCGGG
ATCGAATTTCTAGAAGATCACGGCTTTGTACCTCCGCCGTTGGAGGGGAA
CGCATTGGTCGGGGGGATGTGCTCACTCACCTTTAAAATCTCGCCGGAGG
GGGACAGGTTCTATGACGACAAGGAGGACGTGATGGGTACATTGGGGCTG
CCCATGGCCTTCTCCTTCGACGTCCGGAGCGATGGCGACGTCGACCCGGA
GATGCTCCAATTTTTAAGGTTTCTGAAGCTGGGAGGAAAAGACGCGTTCC
TGCTAGAGGCTGTATTCCGCAACGAGGTCTGGCGATTCATGGAACTCCCG
GTGAGCGAGGCGAATGAGCAAGCAGTGGACGAGGTCATCATCGATGCCTG
CACACAAGCCTTGGCCAATTTTGCGGAAGCAGAGGTCTTGACAGACGAAC
TTATCCAAAAAGAGGGGGTGAGCCCATTGACGATTGCCAGGATGGAGGCC
CTGGCACGGTTACGGGAGTCCGAGAAAGGGGCTTTGGTGGCCACACAGGC
CTGGGCGAATCGGGACCTGATGACGAGCGATTTGAAGGTATACTACCAAG
AAAGACGGCTGGAGGAGCTACAACTCTCGGGGCCCCTGACCGATGATGAG
TACGTGGACGGCTCGGGGGGCCGGCGGACGTCGAACTTGGATTGGTAG back to top
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