EWM30480.1, cds134 (CDS) Nannochloropsis gaditana

Overview
NameEWM30480.1
Unique Namecds134
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:352152..353699 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30480.1
ProductRubisco LS methyltransferase, substrate-binding domain protein
Orig transcript idgnl|cribi|Naga_100013g90.9768.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:352152..353699 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom
IPR015353Rubisco_LSMT_subst-bd
Homology
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|585113144|gb|EWM30480.1| (Rubisco LS methyltransferase, substrate-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1048.5 bits (2710), Expect = 0.000e+0
Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 0
Query:    1 MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRTSNLDW 515
            MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRTSNLDW
Sbjct:    1 MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRTSNLDW 515          
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|553189956|ref|XP_005855108.1| (hypothetical protein NGA_2061300, partial [Nannochloropsis gaditana CCMP526] >gi|422293951|gb|EKU21251.1| hypothetical protein NGA_2061300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 908.286 bits (2346), Expect = 0.000e+0
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
Query:    1 MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIA 446
            MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIA
Sbjct:    7 MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIA 452          
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|873224138|emb|CEM27101.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 281.567 bits (719), Expect = 5.347e-85
Identity = 182/505 (36.04%), Postives = 271/505 (53.66%), Query Frame = 0
Query:   12 FATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIK-DASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDAS---LIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG-KGLKVIADRDTDKGQEIVISYGP-KSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGL-PMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDE-YVDGSGGR 508
            F T L         AP   S+   QP      + S + +  RAA +    +W    G+K D+  + + P   AG  LGL+ T PIK+GE  A+VP++L  + +S   +P+ +     E A+ D S   ++AL LLYE   G  S+ A ++  LP   +D  ++P+ WS  E+  LA+S+T+ +  T ++  + ++  +Q  +     +     +F L +++WA+AVV SRSFF ++ LR+ PL+D  N       EP    +G  G  +G+++ ADRD   G E  +SYGP +S +EFL+  GF+P            C +   I  E D F+DDKED++       ++  +D+++D D DP +LQFLR  ++G KDAF+LE +FR EVW  M LP S ANE    +V+ D C + L +F   +  TD  I   G SP    R + +AR+R SEK AL +T  W   + +   LK YYQERRL+ L L GPLTDDE Y D    R
Sbjct:   35 FVTHLLLTSRRHHHAPIRPSSIMQQPRRLTP-TVSMSVSSSRAAALDSFKQWLANKGVKSDSVSVDVKPSDVAG--LGLICTKPIKRGEAAASVPMSLSITKESATQTPMRE---HLEGAMSDNSEMAMLALYLLYEKSKGDASEIAPWLAVLP--TKDELNNPILWSDGERAELARSTTKAIS-TWLEERSLEFMRLQRRVMEKHPNVFDPATFTLENYQWAMAVVTSRSFFVDSRLRMTPLVDFVNHDPAANVEPDGAPMGFLGSSRGVRLRADRDYAVGDEFRVSYGPERSAVEFLQMFGFIP------EYAPSSCEIEMSIR-EADSFFDDKEDILVNNEFRTLSQVWDLQADKDPDPTLLQFLRLREIGQKDAFILEPLFRGEVWYHMSLPFSPANEGDALKVLEDECVRLLTSFTSDDE-TDRRILA-GSSPEASERQKLMARVRVSEKAALQSTIEWCESEALGLRLKEYYQERRLKLLNLDGPLTDDEVYADDDFER 521          
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|299472213|emb|CBN77183.1| (putative ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloropl [Ectocarpus siliculosus])

HSP 1 Score: 256.144 bits (653), Expect = 5.734e-76
Identity = 168/454 (37.00%), Postives = 246/454 (54.19%), Query Frame = 0
Query:   63 WCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGE-GCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRTSNLDW 515
            W  K+G++      +   S      GLVA   I+ G+++  +P +L  +   +++S + + +  FE   G+  LIALQ+L+E   G  SK A +I  LP+ G+   + PLFW  A+  +   SSTR +   + D V ED+ W+             AD F   DF WAV V LSRSFF +  LRL PL+D AN       +EP  G  G+FG K + + A ++ ++G+E  +SYGPK    +LE++GFVPP + G+ +    C L F I PE D+F+DDKED++   GL  + +FD+ + G  D E+++FLR L + G DAFLLE +FRNEVW FM  PVS  NE+AV+E++   C + L  F       + ++  +  +     R    A +R+ E+ AL  T++W   D    D K YYQERRL++LQL  P   DE            LDW
Sbjct:   18 WLTKSGVRLTDNAVLAGRSPLAGERGLVAAKAIETGQSVLAIPQSLGLTATGLKSSGIAQYVEGFEGWTGETGLIALQVLWERAQGEGSKMAPWIAVLPKEGE--LEMPLFWGEADLTLADASSTRGISGFVAD-VDEDFAWLSENAFAKHPKVFPADKFGPGDFRWAVGVALSRSFFVDGELRLTPLVDFANHSSLRGVSEPTGGTTGLFGSKAVVLRAGKNYEEGEEFFVSYGPKGAAGYLEENGFVPP-VSGSEVT---CELEFSI-PEDDKFFDDKEDILERAGLRTSSTFDLTAVGLPDAELVRFLRLLCVSGDDAFLLEGIFRNEVWDFMNEPVSRPNEEAVNELLATRCEEELKAFFGTAKEEEGIVSGKAEAS---ERQRLCAGVRQGERMALEMTRSWCESDSKALDRKEYYQERRLKDLQLDLPWEVDEIYPTERRPGGGELDW 460          
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|219110715|ref|XP_002177109.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411644|gb|EEC51572.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 253.832 bits (647), Expect = 2.737e-74
Identity = 197/556 (35.43%), Postives = 281/556 (50.54%), Query Frame = 0
Query:   12 FATLLC------NVDSFLVP-----APTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCF--SMDSVRASPLGKVIGE-FEPALGDASLIALQLLYE----AHMGPKSKYAVYIKSLPR---------PGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSAL-----ARGGIS----GLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG-KGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGL---PM--AFSFDVRS----DGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLT--DDEYVD-GSGGRRT---SNLDW 515
            FA + C       V+SFL P      P   S  ++       ++ +S+     AAV         +  I    K+T+ P S     LGLVAT  I++GE    +P ++ +  S D  R      V+ E +    GDA LIAL +L E    A  G  +K  +   SL           PG +  +HPL WS  +Q +L  SST  +   L D + ED  W+++ +      R  +S    G +   F L+ F+WA+A+  SRSFF +N +RL PL+D  N  +  T E + G +G FG  KG +++A +  + G+E+ I YGPKS  ++L +H F P      +    +  L F++ P+ DRFYDDK D++        PM    SFDV S    DG+ DP M+QF+R  KLG  DAFLLE++FR EVW FMELPVSE NE+ V + I++AC  AL +F++           EG  P      E  ++LRESE  AL+ T+ +  RD    DLK YYQ+RRL++L L    +  DD   D G G  R    ++ DW
Sbjct:    9 FAIVYCLSAWSYTVESFLAPQFSNLKPLGVSTLAASSTAEVISNAASSLENSLAAV---------QKDICKTLKVTVAPSSVNR--LGLVATEKIRKGEVFLAMPYDVRYELSADLARNVVFKDVLSEDYNSWTGDAGLIALLILNEVCLAADTGLGTKEPIRQNSLQAFMSAWVAALPGPEDINHPLLWSEEDQEILQSSSTNRIYRVL-DDIEEDVTWLKTNVFEKDGNRFPVSIPWNGEEIPCFSLTGFKWAMALAQSRSFFVDNAVRLLPLMDFCNHADEGTEEARAGFMGTFGTTKGAELVAGQSYEVGEEVFICYGPKSAADYLLEHAFCPE----QSWKTAVSELFFEVDPK-DRFYDDKLDILEFETYDASPMDPVQSFDVVSAPGRDGEPDPFMVQFVRLCKLGATDAFLLESIFRKEVWGFMELPVSETNERDVVDAIMEACQLALDDFSKC---------AEG-GP------EICSKLRESESQALIRTRDFLRRDREALDLKEYYQQRRLKDLGLDSEWSPEDDMSPDLGFGQSRAPGGADYDW 531          
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|1210520569|dbj|GAX20562.1| ([ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase [Fistulifera solaris])

HSP 1 Score: 225.713 bits (574), Expect = 2.220e-64
Identity = 170/464 (36.64%), Postives = 240/464 (51.72%), Query Frame = 0
Query:   73 SKITIGPVSQAGMGLGLVATAPIKQGETLATVPL----NLCFSMDSVRASP--LGKVIGE-FEPALGDASLIALQLLYE-AHMG--PKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSAL-----ARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANR---GEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGL---PM--AFSFDV---------RSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLT--DDEYV 502
            +K+ IGP +     LGL+AT  I +G+ + ++P     +  F + +V  +      V+ + F+   GDA L+A+ LL+  AH    P      ++++LP   ++   HP FWS A+Q VL  SST  + + L D + ED+ W +  +      R   S      F  + F+WA+AV+ SRSFF +  LR  PLLDM N     E        G  G  G K  ++IADR+ + GQE+  SYGPKS  ++L +HGF P      A+      LTF++ P  DRF DDK D++        PM    +FDV         ++DG  DP M+QFLR  KLG  DAFLLE++FR +VW FM LPVSE+NE AV   I + C +AL  F E           +   P      E   +LR++E  AL  T A+  R+    DLK YYQERRL++L L    +  DD+ V
Sbjct:   10 NKVKIGPTT--THRLGLIATERIAKGQVILSLPCENNNDDTFPVLTVMTAKQVFQDVLPDSFDSWTGDAGLLAMLLLHHVAHDANTPMPFRTAWLQALPT-MEEMTHHPYFWSEADQEVLQMSSTNKIYQRL-DDMEEDFAWWKKQVLDVNRQRFPESVHDQPCFSWTGFQWAMAVIQSRSFFLDGALRCIPLLDMCNHDDAAEEIQTASAGGFFGSGGNKNAQLIADRNYEVGQEVFCSYGPKSAADYLLEHGFCPEQCWKTAV----SELTFELDP-NDRFRDDKLDILEFETYDQAPMDPVQTFDVVSSTSTGTTQTDGSPDPAMMQFLRLCKLGSTDAFLLESIFRKDVWGFMALPVSESNELAVVNTIAETCQRALDEFNEC---------ADDRGP------EVCKKLRQAETWALSKTIAFVQREKEALDLKEYYQERRLKDLGLDSEWSPEDDDMV 449          
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|1072224598|gb|OEU09348.1| (large subunit of ribulose-1,5-bisphosphate carboxylase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 226.868 bits (577), Expect = 1.354e-63
Identity = 166/479 (34.66%), Postives = 236/479 (49.27%), Query Frame = 0
Query:   61 LEWCNKNGIKDAS-KITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDS--VRASPLGKVIGE-FEPALGDASLIALQLLYEAHMGPKSKYAV---------------YIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGG----------ISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG-KGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGL---PM--AFSFDVRS----DGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDE 500
             E C K   +  + K+ + P     M LG +AT  IK+GE +A +P +  + + S   R +    V+ + +E   GD  L+AL LL E     K    +               +I+SLP P +   DHPLFW   +Q VL  SS   +   L D + ED  W+   +               SG+    F +  ++W +A+  SRSFF +   R+ P +D  N  +    E + G +G FG  KG +VIA+    +G+E+ +SYGPKS  ++L +HGF P     ++    +  +T +I  E DRFYDDK D++        PM    SFDV S    DG+ DP  LQF+R  KL   DAF+LE++FR EVW FM LPVSE+NE AV E I D C  +L +  +           EG  P      E   +LRESE  A+  T  +  R+    DLK YYQERRL++L L    + +E
Sbjct:  105 FENCRKEITRTCNVKMGLSPTG-GSMRLGWIATKDIKKGEIIANMPYDELWEISSKTARKTIFKDVLDDKYEGWTGDTGLVALSLLNEIARSSKGTAGIEKPERPPQIQSFIEEWIRSLPTPTEMKIDHPLFWPEEDQEVLQLSSNTKIYRVL-DDIEEDAKWLVENIFEKDRETFPEKVQLSSGIDVPCFSVEGYKWVMALTQSRSFFVDGKSRIMPFMDGGNHDDDAM-EIRPGYMGTFGTTKGAEVIANTKYKEGEEVFLSYGPKSAADYLLEHGFCP----RSSFKTAVSEVTIEIDSE-DRFYDDKLDILEFETYDQAPMDPTQSFDVVSAIGRDGEPDPAFLQFVRLKKLNSMDAFMLESIFRKEVWGFMALPVSESNELAVVETISDICESSLEDLNQC---------PEG-GP------EICTQLRESETKAIKRTLEFMLREKQALDLKEYYQERRLKDLGLDSEWSREE 559          
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|1210531272|dbj|GAX10373.1| ([ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase [Fistulifera solaris])

HSP 1 Score: 222.246 bits (565), Expect = 4.375e-63
Identity = 163/462 (35.28%), Postives = 233/462 (50.43%), Query Frame = 0
Query:   73 SKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGE-----FEPALGDASLIALQLLYE-AHMG--PKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSAL-----ARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANR---GEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMA-----FSFDV---------RSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLT--DDEYV 502
            +K+ I  V  A   LGL+AT  I +G+ + ++P +   +   +  +   +V  +     F+   GDA L+A+ LL+  AH    P      ++++LP  G+    HP FWS A+Q +L  SST  + + L D + ED+ W +  +      R   +      F  + F+WA+ ++ SRSFF +  LR  PLLDM N     E        G  G  G K  ++IAD + + GQE+  SYGPKS  ++L +HGF P      A+      LTF+I P  DRF DDK D++       A      +FDV         ++DG  DP M+QFLR  KLG  DAFLLE++FR ++W FM LPVSE NE AV   I + C +AL  F E           +   P      E   +LR++E  AL  T A+  R+    DLK YYQERRL++L L    +  DD+ V
Sbjct:   10 NKVKIASV--ATHRLGLIATEHIAKGQVILSLPCDNDETFPVLTVTAAKQVFRDILPDSFDSWTGDAGLLAMLLLHHVAHDANTPSPLRTAWLQALPTIGEMAH-HPYFWSEADQEILQMSSTNKIYQRL-DDMEEDFAWWKKQVLDVDRQRFPETVNDQPCFSWTGFQWAMTMIQSRSFFLDGALRCIPLLDMCNHDDAAEEIQTASAGGFFGSGGNKNAQLIADHNYEVGQEVFCSYGPKSAADYLLEHGFCPEQCWKTAV----SELTFEIDP-NDRFRDDKLDILEFETYDQAPMDPVQTFDVVSSTSTGTTQTDGSPDPAMMQFLRLCKLGSTDAFLLESIFRKDIWGFMALPVSEQNELAVVNAIAETCQRALDEFNEC---------ADDRGP------EVCKKLRQAESRALSKTIAFVQREKEALDLKEYYQERRLKDLGLDSEWSPEDDDMV 447          
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|397563943|gb|EJK44003.1| (hypothetical protein THAOC_37500 [Thalassiosira oceanica])

HSP 1 Score: 216.468 bits (550), Expect = 1.360e-59
Identity = 168/478 (35.15%), Postives = 247/478 (51.67%), Query Frame = 0
Query:   87 LGLVATAPIKQGETLATVPLN------LCFSMDSVRASPLGKVIGE-FEPALGDASLIALQLLYEAHMG----------PKSKYAV------YIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWI-------------QSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG--KGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCS-LTFKISPEGDRFYDDKEDVMG--TLGL-PM--AFSFDVR----SDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLT-DDEYVDGSGGRRTSNLDW 515
            LGLVAT    +G+ +A++P N      L    +        KV+ E ++   GD  L+A+ LL E              P+ K  V      +I SLP   +    HPL W+  EQ ++  SST+ +   L+D + +D  W+             ++   R G +  +   F +  F +AVAVV SRSFF +  LRL P +D AN  +  +NE   GG+G+  G  KG+ + + +    G E+ ISYGPK   +++ DHGFVPP  + +   G + + L+F++  E DRF DDK D++   T  L PM  A  FDV     S G+ DP M+QFLR +KL GKDAFLLE++FR E+W FM  PVSE NE+A    + +AC  AL++  E E       +    SP    ++ ++  +R SE+ AL  T A+  ++    DLK YYQERRL+ L L    T +DE+   +     ++ DW
Sbjct:  128 LGLVATGSASKGDLVASLPFNEGDGSGLALEPNFAAKIVYDKVLPEGYDGWTGDVGLLAMLLLNEMARQDADSPKGVDLPRRKEGVQALMSAWIASLPSFEEMTEMHPLLWNEDEQEIMQLSSTKKI-YRLLDDIEDDSSWLDENVWSADREKFPETVKIRVGDADEERQCFTVDGFRYAVAVVRSRSFFVDGALRLLPYVDYANHDDYDSNELVGGGIGMLWGSSKGVLLKSGKALRVGDEVRISYGPKGPADYILDHGFVPPMCQLSTQGGAITAELSFEVD-ESDRFRDDKLDILEFETYDLAPMEPAQVFDVVGGPGSTGEPDPAMIQFLRLVKLAGKDAFLLESIFRKEIWGFMSEPVSEDNEKASVTAVQEACEAALSDMNELES------EDSSASPSLNEQLCSM--VRGSEREALERTLAYIKQEAEALDLKEYYQERRLKTLGLDSEWTPEDEFGSTTRVPGAADYDW 595          
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|224001788|ref|XP_002290566.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973988|gb|EED92318.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 197.978 bits (502), Expect = 9.899e-53
Identity = 166/506 (32.81%), Postives = 245/506 (48.42%), Query Frame = 0
Query:   68 GIKDASKITIGPVSQAGMGLGLVATAPI-KQGETLATVPLNLCFSMD----SVRASPLGKVIGE------FEPALGDASLIALQLLYEA-------------------HMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVA------------EDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG--KGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCS--LTFKISPEGDRFYDDKEDVMGTLGLPMA-----FSFDVR----SDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRT---SNLDW 515
            G+   S  T     Q  + LGL+AT  + K  +T+A++P    F  D    ++      KV+ +      ++   GD  L+A+ +L E                      G +S  + ++ SLP P +    HPL W+  EQ ++  SST+ +   L D               +   + +S   + G    +   F    F +AV++V SRSFF +  LRL P LD AN  +  + E   GG+G   G  KG  + + +  + G EI ISYGPK   ++L DHGFVPP  +  +  GG  +  L+F+I  + DRF DDK DV+      +A       FDV     S G+ DP M+QFLR + LGGKDAFLLE++FR E+W FM  PVSEANE+     +++AC +AL+   E  V  D       ++ L+  +M     +RESE+ AL  T  +  ++    DLK YYQERRL+ L L    + +    G  G R    ++ DW
Sbjct:  103 GVISPSSSTDTDFQQNYLRLGLIATESVSKDDQTIASLPF---FDTDGSGLALAPHIATKVVYKDALPEGYDGWTGDVGLLAMLVLNEMARLNVDGGSDNKGIDLPTRKEGIQSLMSAWVASLPSPVEMEGMHPLMWNEEEQEMMQSSSTKKIYRLLDDIDDDSSWLDEKVWSLDRSTFPESVKIQVGDEVEERPCFSQEGFRYAVSLVRSRSFFVDGSLRLLPYLDFANHDDFDSLELVGGGIGTLWGSAKGALMKSGKALEVGDEIRISYGPKGPADYLLDHGFVPPMCQTTSGTGGAITAELSFEID-DSDRFRDDKLDVLEYETYDLAPMEPLQVFDVTGGPGSTGEPDPAMIQFLRLINLGGKDAFLLESIFRKEIWGFMSEPVSEANERLAVMAVVEACEKALSEM-EGPVGGD-------ITSLS-EKMRLCNMVRESERQALERTLIYVKQEAEALDLKEYYQERRLKSLGLDSEWSPENDDVGWAGNRVPGGADYDW 595          
The following BLAST results are available for this feature:
BLAST of EWM30480.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113144|gb|EWM30480.1|0.000e+0100.00Rubisco LS methyltransferase, substrate-binding do... [more]
gi|553189956|ref|XP_005855108.1|0.000e+0100.00hypothetical protein NGA_2061300, partial [Nannoch... [more]
gi|873224138|emb|CEM27101.1|5.347e-8536.04unnamed protein product [Vitrella brassicaformis C... [more]
gi|299472213|emb|CBN77183.1|5.734e-7637.00putative ribulose-1,5 bisphosphate carboxylase/oxy... [more]
gi|219110715|ref|XP_002177109.1|2.737e-7435.43predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210520569|dbj|GAX20562.1|2.220e-6436.64[ribulose-bisphosphate carboxylase]/[fructose-bisp... [more]
gi|1072224598|gb|OEU09348.1|1.354e-6334.66large subunit of ribulose-1,5-bisphosphate carboxy... [more]
gi|1210531272|dbj|GAX10373.1|4.375e-6335.28[ribulose-bisphosphate carboxylase]/[fructose-bisp... [more]
gi|397563943|gb|EJK44003.1|1.360e-5935.15hypothetical protein THAOC_37500 [Thalassiosira oc... [more]
gi|224001788|ref|XP_002290566.1|9.899e-5332.81predicted protein [Thalassiosira pseudonana CCMP13... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna134rna134Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications