EWM30480.1, cds134 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|585113144|gb|EWM30480.1| (Rubisco LS methyltransferase, substrate-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1048.5 bits (2710), Expect = 0.000e+0 Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 0
Query: 1 MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRTSNLDW 515
MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRTSNLDW
Sbjct: 1 MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRTSNLDW 515
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|553189956|ref|XP_005855108.1| (hypothetical protein NGA_2061300, partial [Nannochloropsis gaditana CCMP526] >gi|422293951|gb|EKU21251.1| hypothetical protein NGA_2061300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 908.286 bits (2346), Expect = 0.000e+0 Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
Query: 1 MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIA 446
MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIA
Sbjct: 7 MRSCISPLIVLFATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIA 452
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|873224138|emb|CEM27101.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 281.567 bits (719), Expect = 5.347e-85 Identity = 182/505 (36.04%), Postives = 271/505 (53.66%), Query Frame = 0
Query: 12 FATLLCNVDSFLVPAPTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIK-DASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDAS---LIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG-KGLKVIADRDTDKGQEIVISYGP-KSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGL-PMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDE-YVDGSGGR 508
F T L AP S+ QP + S + + RAA + +W G+K D+ + + P AG LGL+ T PIK+GE A+VP++L + +S +P+ + E A+ D S ++AL LLYE G S+ A ++ LP +D ++P+ WS E+ LA+S+T+ + T ++ + ++ +Q + + +F L +++WA+AVV SRSFF ++ LR+ PL+D N EP +G G +G+++ ADRD G E +SYGP +S +EFL+ GF+P C + I E D F+DDKED++ ++ +D+++D D DP +LQFLR ++G KDAF+LE +FR EVW M LP S ANE +V+ D C + L +F + TD I G SP R + +AR+R SEK AL +T W + + LK YYQERRL+ L L GPLTDDE Y D R
Sbjct: 35 FVTHLLLTSRRHHHAPIRPSSIMQQPRRLTP-TVSMSVSSSRAAALDSFKQWLANKGVKSDSVSVDVKPSDVAG--LGLICTKPIKRGEAAASVPMSLSITKESATQTPMRE---HLEGAMSDNSEMAMLALYLLYEKSKGDASEIAPWLAVLP--TKDELNNPILWSDGERAELARSTTKAIS-TWLEERSLEFMRLQRRVMEKHPNVFDPATFTLENYQWAMAVVTSRSFFVDSRLRMTPLVDFVNHDPAANVEPDGAPMGFLGSSRGVRLRADRDYAVGDEFRVSYGPERSAVEFLQMFGFIP------EYAPSSCEIEMSIR-EADSFFDDKEDILVNNEFRTLSQVWDLQADKDPDPTLLQFLRLREIGQKDAFILEPLFRGEVWYHMSLPFSPANEGDALKVLEDECVRLLTSFTSDDE-TDRRILA-GSSPEASERQKLMARVRVSEKAALQSTIEWCESEALGLRLKEYYQERRLKLLNLDGPLTDDEVYADDDFER 521
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|299472213|emb|CBN77183.1| (putative ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloropl [Ectocarpus siliculosus]) HSP 1 Score: 256.144 bits (653), Expect = 5.734e-76 Identity = 168/454 (37.00%), Postives = 246/454 (54.19%), Query Frame = 0
Query: 63 WCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGEFEPALGDASLIALQLLYEAHMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGE-GCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMAFSFDVRSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRTSNLDW 515
W K+G++ + S GLVA I+ G+++ +P +L + +++S + + + FE G+ LIALQ+L+E G SK A +I LP+ G+ + PLFW A+ + SSTR + + D V ED+ W+ AD F DF WAV V LSRSFF + LRL PL+D AN +EP G G+FG K + + A ++ ++G+E +SYGPK +LE++GFVPP + G+ + C L F I PE D+F+DDKED++ GL + +FD+ + G D E+++FLR L + G DAFLLE +FRNEVW FM PVS NE+AV+E++ C + L F + ++ + + R A +R+ E+ AL T++W D D K YYQERRL++LQL P DE LDW
Sbjct: 18 WLTKSGVRLTDNAVLAGRSPLAGERGLVAAKAIETGQSVLAIPQSLGLTATGLKSSGIAQYVEGFEGWTGETGLIALQVLWERAQGEGSKMAPWIAVLPKEGE--LEMPLFWGEADLTLADASSTRGISGFVAD-VDEDFAWLSENAFAKHPKVFPADKFGPGDFRWAVGVALSRSFFVDGELRLTPLVDFANHSSLRGVSEPTGGTTGLFGSKAVVLRAGKNYEEGEEFFVSYGPKGAAGYLEENGFVPP-VSGSEVT---CELEFSI-PEDDKFFDDKEDILERAGLRTSSTFDLTAVGLPDAELVRFLRLLCVSGDDAFLLEGIFRNEVWDFMNEPVSRPNEEAVNELLATRCEEELKAFFGTAKEEEGIVSGKAEAS---ERQRLCAGVRQGERMALEMTRSWCESDSKALDRKEYYQERRLKDLQLDLPWEVDEIYPTERRPGGGELDW 460
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|219110715|ref|XP_002177109.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411644|gb|EEC51572.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 253.832 bits (647), Expect = 2.737e-74 Identity = 197/556 (35.43%), Postives = 281/556 (50.54%), Query Frame = 0
Query: 12 FATLLC------NVDSFLVP-----APTIASACSSQPAMAAAASTSSTETQDRAAVVPQLLEWCNKNGIKDASKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCF--SMDSVRASPLGKVIGE-FEPALGDASLIALQLLYE----AHMGPKSKYAVYIKSLPR---------PGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSAL-----ARGGIS----GLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG-KGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGL---PM--AFSFDVRS----DGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLT--DDEYVD-GSGGRRT---SNLDW 515
FA + C V+SFL P P S ++ ++ +S+ AAV + I K+T+ P S LGLVAT I++GE +P ++ + S D R V+ E + GDA LIAL +L E A G +K + SL PG + +HPL WS +Q +L SST + L D + ED W+++ + R +S G + F L+ F+WA+A+ SRSFF +N +RL PL+D N + T E + G +G FG KG +++A + + G+E+ I YGPKS ++L +H F P + + L F++ P+ DRFYDDK D++ PM SFDV S DG+ DP M+QF+R KLG DAFLLE++FR EVW FMELPVSE NE+ V + I++AC AL +F++ EG P E ++LRESE AL+ T+ + RD DLK YYQ+RRL++L L + DD D G G R ++ DW
Sbjct: 9 FAIVYCLSAWSYTVESFLAPQFSNLKPLGVSTLAASSTAEVISNAASSLENSLAAV---------QKDICKTLKVTVAPSSVNR--LGLVATEKIRKGEVFLAMPYDVRYELSADLARNVVFKDVLSEDYNSWTGDAGLIALLILNEVCLAADTGLGTKEPIRQNSLQAFMSAWVAALPGPEDINHPLLWSEEDQEILQSSSTNRIYRVL-DDIEEDVTWLKTNVFEKDGNRFPVSIPWNGEEIPCFSLTGFKWAMALAQSRSFFVDNAVRLLPLMDFCNHADEGTEEARAGFMGTFGTTKGAELVAGQSYEVGEEVFICYGPKSAADYLLEHAFCPE----QSWKTAVSELFFEVDPK-DRFYDDKLDILEFETYDASPMDPVQSFDVVSAPGRDGEPDPFMVQFVRLCKLGATDAFLLESIFRKEVWGFMELPVSETNERDVVDAIMEACQLALDDFSKC---------AEG-GP------EICSKLRESESQALIRTRDFLRRDREALDLKEYYQQRRLKDLGLDSEWSPEDDMSPDLGFGQSRAPGGADYDW 531
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|1210520569|dbj|GAX20562.1| ([ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase [Fistulifera solaris]) HSP 1 Score: 225.713 bits (574), Expect = 2.220e-64 Identity = 170/464 (36.64%), Postives = 240/464 (51.72%), Query Frame = 0
Query: 73 SKITIGPVSQAGMGLGLVATAPIKQGETLATVPL----NLCFSMDSVRASP--LGKVIGE-FEPALGDASLIALQLLYE-AHMG--PKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSAL-----ARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANR---GEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGL---PM--AFSFDV---------RSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLT--DDEYV 502
+K+ IGP + LGL+AT I +G+ + ++P + F + +V + V+ + F+ GDA L+A+ LL+ AH P ++++LP ++ HP FWS A+Q VL SST + + L D + ED+ W + + R S F + F+WA+AV+ SRSFF + LR PLLDM N E G G G K ++IADR+ + GQE+ SYGPKS ++L +HGF P A+ LTF++ P DRF DDK D++ PM +FDV ++DG DP M+QFLR KLG DAFLLE++FR +VW FM LPVSE+NE AV I + C +AL F E + P E +LR++E AL T A+ R+ DLK YYQERRL++L L + DD+ V
Sbjct: 10 NKVKIGPTT--THRLGLIATERIAKGQVILSLPCENNNDDTFPVLTVMTAKQVFQDVLPDSFDSWTGDAGLLAMLLLHHVAHDANTPMPFRTAWLQALPT-MEEMTHHPYFWSEADQEVLQMSSTNKIYQRL-DDMEEDFAWWKKQVLDVNRQRFPESVHDQPCFSWTGFQWAMAVIQSRSFFLDGALRCIPLLDMCNHDDAAEEIQTASAGGFFGSGGNKNAQLIADRNYEVGQEVFCSYGPKSAADYLLEHGFCPEQCWKTAV----SELTFELDP-NDRFRDDKLDILEFETYDQAPMDPVQTFDVVSSTSTGTTQTDGSPDPAMMQFLRLCKLGSTDAFLLESIFRKDVWGFMALPVSESNELAVVNTIAETCQRALDEFNEC---------ADDRGP------EVCKKLRQAETWALSKTIAFVQREKEALDLKEYYQERRLKDLGLDSEWSPEDDDMV 449
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|1072224598|gb|OEU09348.1| (large subunit of ribulose-1,5-bisphosphate carboxylase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 226.868 bits (577), Expect = 1.354e-63 Identity = 166/479 (34.66%), Postives = 236/479 (49.27%), Query Frame = 0
Query: 61 LEWCNKNGIKDAS-KITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDS--VRASPLGKVIGE-FEPALGDASLIALQLLYEAHMGPKSKYAV---------------YIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSALARGG----------ISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG-KGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGL---PM--AFSFDVRS----DGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDE 500
E C K + + K+ + P M LG +AT IK+GE +A +P + + + S R + V+ + +E GD L+AL LL E K + +I+SLP P + DHPLFW +Q VL SS + L D + ED W+ + SG+ F + ++W +A+ SRSFF + R+ P +D N + E + G +G FG KG +VIA+ +G+E+ +SYGPKS ++L +HGF P ++ + +T +I E DRFYDDK D++ PM SFDV S DG+ DP LQF+R KL DAF+LE++FR EVW FM LPVSE+NE AV E I D C +L + + EG P E +LRESE A+ T + R+ DLK YYQERRL++L L + +E
Sbjct: 105 FENCRKEITRTCNVKMGLSPTG-GSMRLGWIATKDIKKGEIIANMPYDELWEISSKTARKTIFKDVLDDKYEGWTGDTGLVALSLLNEIARSSKGTAGIEKPERPPQIQSFIEEWIRSLPTPTEMKIDHPLFWPEEDQEVLQLSSNTKIYRVL-DDIEEDAKWLVENIFEKDRETFPEKVQLSSGIDVPCFSVEGYKWVMALTQSRSFFVDGKSRIMPFMDGGNHDDDAM-EIRPGYMGTFGTTKGAEVIANTKYKEGEEVFLSYGPKSAADYLLEHGFCP----RSSFKTAVSEVTIEIDSE-DRFYDDKLDILEFETYDQAPMDPTQSFDVVSAIGRDGEPDPAFLQFVRLKKLNSMDAFMLESIFRKEVWGFMALPVSESNELAVVETISDICESSLEDLNQC---------PEG-GP------EICTQLRESETKAIKRTLEFMLREKQALDLKEYYQERRLKDLGLDSEWSREE 559
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|1210531272|dbj|GAX10373.1| ([ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase [Fistulifera solaris]) HSP 1 Score: 222.246 bits (565), Expect = 4.375e-63 Identity = 163/462 (35.28%), Postives = 233/462 (50.43%), Query Frame = 0
Query: 73 SKITIGPVSQAGMGLGLVATAPIKQGETLATVPLNLCFSMDSVRASPLGKVIGE-----FEPALGDASLIALQLLYE-AHMG--PKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWIQSAL-----ARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANR---GEGCTNEPQIGGLGIFGGKGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCSLTFKISPEGDRFYDDKEDVMGTLGLPMA-----FSFDV---------RSDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLT--DDEYV 502
+K+ I V A LGL+AT I +G+ + ++P + + + + +V + F+ GDA L+A+ LL+ AH P ++++LP G+ HP FWS A+Q +L SST + + L D + ED+ W + + R + F + F+WA+ ++ SRSFF + LR PLLDM N E G G G K ++IAD + + GQE+ SYGPKS ++L +HGF P A+ LTF+I P DRF DDK D++ A +FDV ++DG DP M+QFLR KLG DAFLLE++FR ++W FM LPVSE NE AV I + C +AL F E + P E +LR++E AL T A+ R+ DLK YYQERRL++L L + DD+ V
Sbjct: 10 NKVKIASV--ATHRLGLIATEHIAKGQVILSLPCDNDETFPVLTVTAAKQVFRDILPDSFDSWTGDAGLLAMLLLHHVAHDANTPSPLRTAWLQALPTIGEMAH-HPYFWSEADQEILQMSSTNKIYQRL-DDMEEDFAWWKKQVLDVDRQRFPETVNDQPCFSWTGFQWAMTMIQSRSFFLDGALRCIPLLDMCNHDDAAEEIQTASAGGFFGSGGNKNAQLIADHNYEVGQEVFCSYGPKSAADYLLEHGFCPEQCWKTAV----SELTFEIDP-NDRFRDDKLDILEFETYDQAPMDPVQTFDVVSSTSTGTTQTDGSPDPAMMQFLRLCKLGSTDAFLLESIFRKDIWGFMALPVSEQNELAVVNAIAETCQRALDEFNEC---------ADDRGP------EVCKKLRQAESRALSKTIAFVQREKEALDLKEYYQERRLKDLGLDSEWSPEDDDMV 447
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|397563943|gb|EJK44003.1| (hypothetical protein THAOC_37500 [Thalassiosira oceanica]) HSP 1 Score: 216.468 bits (550), Expect = 1.360e-59 Identity = 168/478 (35.15%), Postives = 247/478 (51.67%), Query Frame = 0
Query: 87 LGLVATAPIKQGETLATVPLN------LCFSMDSVRASPLGKVIGE-FEPALGDASLIALQLLYEAHMG----------PKSKYAV------YIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVAEDYGWI-------------QSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG--KGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCS-LTFKISPEGDRFYDDKEDVMG--TLGL-PM--AFSFDVR----SDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLT-DDEYVDGSGGRRTSNLDW 515
LGLVAT +G+ +A++P N L + KV+ E ++ GD L+A+ LL E P+ K V +I SLP + HPL W+ EQ ++ SST+ + L+D + +D W+ ++ R G + + F + F +AVAVV SRSFF + LRL P +D AN + +NE GG+G+ G KG+ + + + G E+ ISYGPK +++ DHGFVPP + + G + + L+F++ E DRF DDK D++ T L PM A FDV S G+ DP M+QFLR +KL GKDAFLLE++FR E+W FM PVSE NE+A + +AC AL++ E E + SP ++ ++ +R SE+ AL T A+ ++ DLK YYQERRL+ L L T +DE+ + ++ DW
Sbjct: 128 LGLVATGSASKGDLVASLPFNEGDGSGLALEPNFAAKIVYDKVLPEGYDGWTGDVGLLAMLLLNEMARQDADSPKGVDLPRRKEGVQALMSAWIASLPSFEEMTEMHPLLWNEDEQEIMQLSSTKKI-YRLLDDIEDDSSWLDENVWSADREKFPETVKIRVGDADEERQCFTVDGFRYAVAVVRSRSFFVDGALRLLPYVDYANHDDYDSNELVGGGIGMLWGSSKGVLLKSGKALRVGDEVRISYGPKGPADYILDHGFVPPMCQLSTQGGAITAELSFEVD-ESDRFRDDKLDILEFETYDLAPMEPAQVFDVVGGPGSTGEPDPAMIQFLRLVKLAGKDAFLLESIFRKEIWGFMSEPVSEDNEKASVTAVQEACEAALSDMNELES------EDSSASPSLNEQLCSM--VRGSEREALERTLAYIKQEAEALDLKEYYQERRLKTLGLDSEWTPEDEFGSTTRVPGAADYDW 595
BLAST of EWM30480.1 vs. NCBI_GenBank
Match: gi|224001788|ref|XP_002290566.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973988|gb|EED92318.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 197.978 bits (502), Expect = 9.899e-53 Identity = 166/506 (32.81%), Postives = 245/506 (48.42%), Query Frame = 0
Query: 68 GIKDASKITIGPVSQAGMGLGLVATAPI-KQGETLATVPLNLCFSMD----SVRASPLGKVIGE------FEPALGDASLIALQLLYEA-------------------HMGPKSKYAVYIKSLPRPGQDGFDHPLFWSTAEQGVLAKSSTRNLGETLIDAVA------------EDYGWIQSALARGGISGLQADSFDLSDFEWAVAVVLSRSFFAENGLRLAPLLDMANRGEGCTNEPQIGGLGIFGG--KGLKVIADRDTDKGQEIVISYGPKSGIEFLEDHGFVPPPLEGNALVGGMCS--LTFKISPEGDRFYDDKEDVMGTLGLPMA-----FSFDVR----SDGDVDPEMLQFLRFLKLGGKDAFLLEAVFRNEVWRFMELPVSEANEQAVDEVIIDACTQALANFAEAEVLTDELIQKEGVSPLTIARMEALARLRESEKGALVATQAWANRDLMTSDLKVYYQERRLEELQLSGPLTDDEYVDGSGGRRT---SNLDW 515
G+ S T Q + LGL+AT + K +T+A++P F D ++ KV+ + ++ GD L+A+ +L E G +S + ++ SLP P + HPL W+ EQ ++ SST+ + L D + + +S + G + F F +AV++V SRSFF + LRL P LD AN + + E GG+G G KG + + + + G EI ISYGPK ++L DHGFVPP + + GG + L+F+I + DRF DDK DV+ +A FDV S G+ DP M+QFLR + LGGKDAFLLE++FR E+W FM PVSEANE+ +++AC +AL+ E V D ++ L+ +M +RESE+ AL T + ++ DLK YYQERRL+ L L + + G G R ++ DW
Sbjct: 103 GVISPSSSTDTDFQQNYLRLGLIATESVSKDDQTIASLPF---FDTDGSGLALAPHIATKVVYKDALPEGYDGWTGDVGLLAMLVLNEMARLNVDGGSDNKGIDLPTRKEGIQSLMSAWVASLPSPVEMEGMHPLMWNEEEQEMMQSSSTKKIYRLLDDIDDDSSWLDEKVWSLDRSTFPESVKIQVGDEVEERPCFSQEGFRYAVSLVRSRSFFVDGSLRLLPYLDFANHDDFDSLELVGGGIGTLWGSAKGALMKSGKALEVGDEIRISYGPKGPADYLLDHGFVPPMCQTTSGTGGAITAELSFEID-DSDRFRDDKLDVLEYETYDLAPMEPLQVFDVTGGPGSTGEPDPAMIQFLRLINLGGKDAFLLESIFRKEIWGFMSEPVSEANERLAVMAVVEACEKALSEM-EGPVGGD-------ITSLS-EKMRLCNMVRESERQALERTLIYVKQEAEALDLKEYYQERRLKSLGLDSEWSPENDDVGWAGNRVPGGADYDW 595 The following BLAST results are available for this feature:
BLAST of EWM30480.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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