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Properties
| Property Name | Value |
|---|
| Product | abortive infection protein |
| Orig transcript id | gnl|cribi|Naga_100205g9.2992.mrna |
| Orig protein id | gnl|cribi|Naga_100205g9.2992 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:383205..384574 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1337 ID=rna1337|Name=rna1337|organism=Nannochloropsis gaditana|type=mRNA|length=1267bp
GACGGGTCGCACTCGTATATTGCTGACTTGAAAATCGTCCAATGCCAATA
TCCAACACGATACAAACAAAGAGCGCAACAAAGGGAATGCTGCGGTCTGA
TAAGGCATACTACGTGCTCGTTTTGTTTTTGGTAGCTCCCTTGGAAACCA
TGGCACGCGCTAGATCTGCCGGCTGCGTCATTCTTCCTGCGTTCAATCGA
ATGTCCACAACAACTATGTCGAGGCTCTGCGCAGACAGTCAAAAACTTGC
TGAATTTTTGGATGGATGTAAAAACATTGTAGCGGTTACAGGGGCCGGAA
TCAGCACGGAAAGCGGCATCCCAGACTACAGGTCCCCGACTGGTTCATTT
TCTCGCGGATTCAAGCCAATGGTACATGATGAATTCATCAGCAAGCCAGT
CAAGAGATCTCGCTACTGGGCGCGCTCGATGCTTGGCTACCATCGTTTTT
CTCGTGCCCAGCCCAACAAAGGCCATCGAGCGTTAGCAGCCCTTGAGAAC
GATGTGGGAACGCTGGGTCTCATCATCAGCCAAAATGTTGACGGTCTCCA
TCAAAGAGCCGGGTCCAAGCGTGTGCTGGATCTGCATGGGCGCAACGACC
GGATCGTATGCCTGAGCTGCGGGCTGCAGATCCCTCGGCGCGGTTTTCAG
GCAGCCTTAGAGGAGCTAAACCAGCAGTGGGTGCGACAGAACGTCCCTGC
GACAACCTTGGAAATGTTCAGCGACGGAGACGTGGACCTTGAGAACGCAG
TGTTCGAAGACTTCGCGGTCCCGTCCTGCAAGGCATGCGGGGGGGTCCTG
AAGCCCGCCGTCGTCTTCTATGGGGACGTGGTGCCTTCGGCCGTGGTCCA
GGAGGCATTCGCCGCCGTGGATGCCGCGGACGCCGTACTGGTGGCGGGGA
CAAGTTTGATGGTTTATAGCAGCTGGCGCTTTGTTCTTGACGCGGCTAAG
AAGGGGAAGCCCATCCTGGTGGTGAACCAGGGGCAGACTCGGGCCGAGCG
GGAGGGGGTGCCGCATCTGAAGATCGAGAAGGGATGTGGAGAGGTCTTGG
AGGGGGCAGTGCAGGCGTTGCTAGGAAGTCGGGTGGAGCAATGCGAGGGA
AAATAGAGGCAGCATAATCCGGGCGTTCCGGGAATGTGCCAAAAAGGCCC
CACAGGGATGTGATGCGCTCAGAGGGGCGATGTCTAAACCGAAATCAATC
ATTAAATCCATACCATAGACGAGGCCATTCAACCAAAGGAATAAAAAATA
AAACACCCATCCTCCTT back to topprotein sequence of rna1337 >rna1337-protein ID=rna1337-protein|Name=rna1337|organism=Nannochloropsis gaditana|type=polypeptide|length=302bp
MGLNHVLNVLPALLLLTIIPLTRGAGFIHLSSRPCTSPFQFPHAPSPRSS
SSFATTTSRTGFPCQKRQPLFQQKPPDSEAPSPEVTPSDQPSIPPPAIPR
SPNYKTIAALVAGELLLGLLAFPLGHVFKINPLATAKAASGFGPLAAVSA
LLTLPALLLHLTSGREIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSL
SAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLA
LVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNHFWGHWGRKTGGESR
AG back to topmRNA from alignment at CM002457.1:383205..384574- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1337 ID=rna1337|Name=rna1337|organism=Nannochloropsis gaditana|type=mRNA|length=1370bp|location=Sequence derived from alignment at CM002457.1:383205..384574- (Nannochloropsis gaditana)
CGTGCGTACACACGACCCTGCGATGCGGGTCATGGTGACGATGGAACGCC
CAGGTGCATGGAGATCAACGTCTCAGGCGTGAAGGCATGTGTCTGGGGCG
AGGAAGCTGATCGCTGACGCCTGCATTTTGGCATCTCCGAGACCCGAAAA
TCGGAGCAGAAAGACAAGTTGACCTTGCCGTCACCCACGCACGAGTGTTT
ACCGGCTTCTACGCCGTCGTTTTTATTTGTCAGTGACATCATTGTTCACG
ATCATCACAGAGTGACATGGGCTTAAATCACGTCCTCAATGTCCTACCTG
CTCTGCTGCTACTTACTATCATTCCACTGACGCGCGGGGCGGGCTTCATC
CACCTGAGTTCTCGCCCCTGCACGTCACCTTTTCAATTCCCACACGCTCC
ATCGCCGCGTAGTTCCTCTTCTTTTGCCACCACGACCTCTCGCACCGGTT
TTCCATGTCAGAAGCGGCAGCCTCTTTTCCAACAAAAACCTCCTGACAGC
GAGGCGCCATCTCCTGAAGTCACCCCATCGGACCAGCCCTCCATACCTCC
TCCTGCCATTCCACGCTCCCCAAACTACAAGACCATTGCAGCGTTAGTAG
CCGGCGAGCTGTTGCTGGGCCTTTTAGCCTTCCCCTTGGGACACGTGTTT
AAGATCAACCCGCTCGCCACCGCCAAGGCAGCCTCCGGCTTTGGACCCCT
GGCCGCGGTCAGCGCCCTCCTCACTCTCCCCGCCCTCTTGCTCCACCTCA
CGAGCGGACGCGAGATCGAGGACATGTTGCGGGAGTCCTTGGAAGGAATC
TTCGGCTCGGACACGGCCAAGAAGCGACCGGCGGTGGTGATCGCCATCTC
CGTCCTCCTCAGTCTCTCTGCGGGGATGGGGGAGGAAGTCGCCTTCCGCG
GAGCGCTTCAGCCCATATTCGCTCAAGCCACGGGTCAGCCCATGTGGGGT
CTGGGTATTTCTTCCCTCATCTTCGCCGCCCTACACGCCGCCACGCCTCG
TTATTTCCTCCTCGCCCTGGTCCTCTCCGTGTACTTGGGCTGCCTACAAC
TTCGGTATTGCAACCTATGGGTACCGATCCTTGTGCACACCCTCTTCGAC
GTGGTGGGCTTCATGCAGAACCACTTCTGGGGACACTGGGGCAGGAAGAC
TGGCGGAGAGTCCAGGGCGGGGTAGGTGAACGGGCGGCAAGAAAAGTCGG
TCGAAGGAGGTGACCAGATTTTTTTGGTACCATGAAAGAATTCATGGGGC
TCCGAGAAAGGAGGATGGGTGTTTTATTTTTTATTCCTTTGGTTGAATGG
CCTCGTCTATGGTATGGATTTAATGATTGATTTCGGTTTAGACATCGCCC
CTCTGAGCGCATCACATCCC back to topCoding sequence (CDS) from alignment at CM002457.1:383205..384574- >rna1337 ID=rna1337|Name=rna1337|organism=Nannochloropsis gaditana|type=CDS|length=909bp|location=Sequence derived from alignment at CM002457.1:383205..384574- (Nannochloropsis gaditana)
ATGGGCTTAAATCACGTCCTCAATGTCCTACCTGCTCTGCTGCTACTTAC
TATCATTCCACTGACGCGCGGGGCGGGCTTCATCCACCTGAGTTCTCGCC
CCTGCACGTCACCTTTTCAATTCCCACACGCTCCATCGCCGCGTAGTTCC
TCTTCTTTTGCCACCACGACCTCTCGCACCGGTTTTCCATGTCAGAAGCG
GCAGCCTCTTTTCCAACAAAAACCTCCTGACAGCGAGGCGCCATCTCCTG
AAGTCACCCCATCGGACCAGCCCTCCATACCTCCTCCTGCCATTCCACGC
TCCCCAAACTACAAGACCATTGCAGCGTTAGTAGCCGGCGAGCTGTTGCT
GGGCCTTTTAGCCTTCCCCTTGGGACACGTGTTTAAGATCAACCCGCTCG
CCACCGCCAAGGCAGCCTCCGGCTTTGGACCCCTGGCCGCGGTCAGCGCC
CTCCTCACTCTCCCCGCCCTCTTGCTCCACCTCACGAGCGGACGCGAGAT
CGAGGACATGTTGCGGGAGTCCTTGGAAGGAATCTTCGGCTCGGACACGG
CCAAGAAGCGACCGGCGGTGGTGATCGCCATCTCCGTCCTCCTCAGTCTC
TCTGCGGGGATGGGGGAGGAAGTCGCCTTCCGCGGAGCGCTTCAGCCCAT
ATTCGCTCAAGCCACGGGTCAGCCCATGTGGGGTCTGGGTATTTCTTCCC
TCATCTTCGCCGCCCTACACGCCGCCACGCCTCGTTATTTCCTCCTCGCC
CTGGTCCTCTCCGTGTACTTGGGCTGCCTACAACTTCGGTATTGCAACCT
ATGGGTACCGATCCTTGTGCACACCCTCTTCGACGTGGTGGGCTTCATGC
AGAACCACTTCTGGGGACACTGGGGCAGGAAGACTGGCGGAGAGTCCAGG
GCGGGGTAG back to top
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