EWM29340.1, cds1335 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|585111867|gb|EWM29340.1| (abortive infection protein [Nannochloropsis gaditana]) HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0 Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0
Query: 1 MGLNHVLNVLPALLLLTIIPLTRGAGFIHLSSRPCTSPFQFPHAPSPRSSSSFATTTSRTGFPCQKRQPLFQQKPPDSEAPSPEVTPSDQPSIPPPAIPRSPNYKTIAALVAGELLLGLLAFPLGHVFKINPLATAKAASGFGPLAAVSALLTLPALLLHLTSGREIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNHFWGHWGRKTGGESRAG 302
MGLNHVLNVLPALLLLTIIPLTRGAGFIHLSSRPCTSPFQFPHAPSPRSSSSFATTTSRTGFPCQKRQPLFQQKPPDSEAPSPEVTPSDQPSIPPPAIPRSPNYKTIAALVAGELLLGLLAFPLGHVFKINPLATAKAASGFGPLAAVSALLTLPALLLHLTSGREIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNHFWGHWGRKTGGESRAG
Sbjct: 1 MGLNHVLNVLPALLLLTIIPLTRGAGFIHLSSRPCTSPFQFPHAPSPRSSSSFATTTSRTGFPCQKRQPLFQQKPPDSEAPSPEVTPSDQPSIPPPAIPRSPNYKTIAALVAGELLLGLLAFPLGHVFKINPLATAKAASGFGPLAAVSALLTLPALLLHLTSGREIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNHFWGHWGRKTGGESRAG 302
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|397639555|gb|EJK73636.1| (hypothetical protein THAOC_04730 [Thalassiosira oceanica]) HSP 1 Score: 89.3521 bits (220), Expect = 1.162e-16 Identity = 69/232 (29.74%), Postives = 106/232 (45.69%), Query Frame = 0
Query: 76 PDSEAPSPEVTPSDQPSIPPPAIPRSPNYKTIAALVAGELLL-----------GLLAFPLGHVFKINPLATAKAASGFGPLAAVSALLTL-----PALLLHLTSGREIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNHFWGHW 291
PD +A S + + P RS + I LVA + LL G+ + LG F +NP A + PL ++ ++ + PAL + + ++ + G K+R +A S+LL L AG+GEE+ FRG Q + + G L IS ++F LHA TP Y LLA SV+ G + + NL +P++ HT++DV + W HW
Sbjct: 131 PDGDAKSGDDGEPASREVDGPTSLRS-DVTNILRLVATQGLLIPLSLALARAFGVANYGLGAGFSVNPAAILQGLQYCVPLFGLAGIMRVIEPYSPAL-------QGVTKATERTVLFVMGK---KRRLGFALAFSILLGLCAGVGEELLFRGVFQTLLSTKLGSSNSALCISGVVFGLLHAVTPLYALLAGAASVFFGYIYITTGNLAIPMVAHTIYDVGALI----WAHW 347
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|1149170625|ref|WP_077728585.1| (CPBP family intramembrane metalloprotease [Methylocaldum sp. 14B]) HSP 1 Score: 80.4925 bits (197), Expect = 1.882e-14 Identity = 70/195 (35.90%), Postives = 101/195 (51.79%), Query Frame = 0
Query: 100 RSPNYKTIAALVAGELLLGLLAFPLGHVFKINPLATAKAASGFGPLAAVSALL-TLPALLLHLTSG-------REIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYC---NLWVPILVHTLFDVVGFM 283
R + IA G L+L LA+ +G INPLA GF P+A V ++ TLP LL S R +++ L E L G ++ R ++ + L AG+ EE+ FRG LQP F Q G + G+ S+L+FA +H TP Y LLA + VYLG + L + NL +PIL+H ++D + F+
Sbjct: 9 RYNQFLKIATWFEGGLIL--LAYVIGWAVSINPLAHI----GFSPMALVWGIVGTLPLYLLFALSYNLPWSGMRAVKNFLVEKL----GPFLSRYRWQELLYLGFL----AGISEEILFRGLLQPWFEQNWGW-IGGIAFSNLVFALVHWVTPLYALLAGLTGVYLG-IALDFGGERNLVIPILIHAIYDFLAFI 187
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|1196470826|ref|WP_086134894.1| (CPBP family intramembrane metalloprotease [Methylocaldum sp. SAD2]) HSP 1 Score: 79.7221 bits (195), Expect = 3.350e-14 Identity = 70/195 (35.90%), Postives = 101/195 (51.79%), Query Frame = 0
Query: 100 RSPNYKTIAALVAGELLLGLLAFPLGHVFKINPLATAKAASGFGPLAAVSALL-TLPALLLHLTSG-------REIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYC---NLWVPILVHTLFDVVGFM 283
R + IA G L+L LA+ +G INPLA GF P+A V ++ TLP LL S R +++ L E L G ++ R ++ + L AG+ EE+ FRG LQP F Q G + G+ S+L+FA +H TP Y LLA + VYLG + L + NL +PIL+H ++D + F+
Sbjct: 9 RYNQFLKIATWFEGGLIL--LAYVIGWAVSINPLAHI----GFSPMALVLGIVGTLPLYLLFALSYNLPWSGMRAVKNFLVEKL----GPFLSRYRWQELLYLGFL----AGISEEILFRGLLQPWFEQNWGW-IGGIAFSNLVFALVHWVTPLYALLAGLTGVYLG-IALDFGGERNLVIPILIHAIYDFLAFI 187
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|219123986|ref|XP_002182295.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406256|gb|EEC46196.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 81.2629 bits (199), Expect = 5.623e-14 Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = 0
Query: 167 IEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNHFWGHW 291
++D+ + + I +P ++ L L+AG GEE+ FRG LQ A G P+ +G +S++F ALHA TP Y LA + SVY G + L + NL VPI HT++DV ++ HW
Sbjct: 175 LQDVTKATQRSILALMGGTFKPLFAFFTALALGLAAGFGEEMLFRGILQYELANRFG-PVLAVGAASIVFGALHAVTPLYAFLATLASVYFGAIYLAFDNLAVPIWCHTIYDVGAL----YYAHW 294
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|1183541084|emb|SMG67299.1| (Abortive infection protein [methanotrophic bacterial endosymbiont of Bathymodiolus sp.]) HSP 1 Score: 78.9518 bits (193), Expect = 7.009e-14 Identity = 67/202 (33.17%), Postives = 104/202 (51.49%), Query Frame = 0
Query: 89 DQPSIPPPAIPRSPNYKTIAALVAGELLLGLLAFPLGHVFKINPLATAKAASGFGPLAAVSALL-TLPALLLHLTSGR-EIEDM--LRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYC---NLWVPILVHTLFDVVGFM 283
++PSI P ++ K AAL+ L+A LG + INP F A ++ ++ TLP LL + + E++ + +R+ L G K +I ++ + AG+ EE+ FRG +QP A G M GL +SS++F +HA T YFL+A +S+YLG L L Y NL PI++H+L+D F+
Sbjct: 2 NEPSIDPDNFFKTAC-KFEAALI-------LVAIVLGWIAAINPFQFII----FDEQAIINGIIGTLPLCLLFIALNQLELKSLQKIRQVLHQTLGPSLYKHHWTDLIVLAAI----AGISEEILFRGVIQPWMENAWGM-MAGLVVSSILFGLVHAVTALYFLMATAVSIYLG-LHLDYHNSRNLLTPIIIHSLYDFFAFV 185
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|223995221|ref|XP_002287294.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976410|gb|EED94737.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 78.1814 bits (191), Expect = 6.414e-13 Identity = 67/228 (29.39%), Postives = 104/228 (45.61%), Query Frame = 0
Query: 103 NYKTIAALVAGELLL--------GLLAFP---LGHVFKINPLATAKAASGFGPLAAVSALLTL-----PALLLHLTSGREIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISS-------LIFAALHAATPRYFLLALVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNHFWGHWG-----RKTGGESRAG 302
+ + I LV + LL +L P LG F +N AT + PL ++ ++ + PAL +++ + S+ + GS ++RP + +S+LL AG GEE FRG Q ++ G+ + LG+S ++F LHA TP Y LLA S++ G L Y NL VP++ H ++D+ M W HW +K E AG
Sbjct: 87 DLQNIGTLVGAQTLLVPISIFVANMLRLPNRGLGSGFILNSAATIQGIQWTIPLFVIAGIMRVIEPYSPAL-------QDVTKATQRSVLAVMGS---RRRPVFALLVSILLGAVAGWGEEWLFRGVFQTSMSRLFGEGI-ALGVSGHPSILFRVVFGLLHAVTPVYALLAGAASLFFGYLYNTYGNLAVPMVCHAVYDIGALM----WAHWSVTALTKKEQDEIMAG 299
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|1170132594|ref|WP_080523235.1| (CPBP family intramembrane metalloprotease [Methyloprofundus sedimenti] >gi|1169186223|gb|OQK18637.1| abortive infection protein [Methyloprofundus sedimenti]) HSP 1 Score: 75.8702 bits (185), Expect = 7.398e-13 Identity = 61/202 (30.20%), Postives = 103/202 (50.99%), Query Frame = 0
Query: 89 DQPSIPPPAIPRSPNYKTIAALVAGELLLGLLAFPLGHVFKINPLATAKAASGFGPLAAVSALL-TLPALLLHLTSGR-EIEDM--LRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYC---NLWVPILVHTLFDVVGFM 283
++P+I P ++ Y E L L+A +G + INP F A ++ ++ TLP L+ + + ++E + +++ L G K+ A + ++ + AG+ EE+ FRG +QP + G M GL +SS+IF +HA T YF++A +S+YLG L L Y NL PI++H+L+D F+
Sbjct: 2 NEPTIDPDNFFKTACY--------FESSLVLVAIAIGWLVDINPFEFIV----FNEQAVINGIMGTLPLCLIFIALNQLQLESLQKIKQVLHSTLGPSLHKRHWADLFVLAAV----AGISEEILFRGVIQPWMENSWG-LMAGLLVSSVIFGLVHAVTALYFIMATAVSIYLG-LYLDYDNTRNLLTPIIIHSLYDFFAFV 185
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|1072225179|gb|OEU09927.1| (Abi-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 74.7146 bits (182), Expect = 1.973e-12 Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = 0
Query: 167 IEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNHF 287
++D+ + + + RP + ++ L ++AG+GEE+ FRG LQ G +GI+S+IF ALHA TP Y LA + SVY G L L NL +PI+ H +D + H+
Sbjct: 64 LQDVTKATQSSVLSLLGGTFRPIIGTITALALGVAAGLGEEMLFRGVLQNELGIRIGSDYIAVGIASIIFGALHAVTPLYAGLAGLASVYFGWLYLATGNLAIPIVTHAFYDWAALLYAHW 184
BLAST of EWM29340.1 vs. NCBI_GenBank
Match: gi|299471514|emb|CBN80000.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.6406 bits (187), Expect = 3.762e-12 Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 0
Query: 130 INPLATAKAASGFGPLAAVSALLTLPALLLHLTSGREIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGL-GISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNH 286
++P ATA +G PL LL R+I++ E +FGS K++ V + + LS+ G+ EE AFRG L I A TG PM + G+S+ IF +LHAAT YFL A + ++ L L N++VPI+ H ++D + ++ H
Sbjct: 218 VSPAATALGVAGMVPLLGYGLLLDR---WTEWEWVRKIDEATSEVALQLFGS---KRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVGLSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYH 369 The following BLAST results are available for this feature:
BLAST of EWM29340.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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