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Properties
| Property Name | Value |
|---|
| Product | h aca ribonucleoprotein complex subunit 4 |
| Orig transcript id | gnl|cribi|Naga_100028g51.3302.mrna |
| Orig protein id | gnl|cribi|Naga_100028g51.3302 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:356469..358674 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1328 ID=rna1328|Name=rna1328|organism=Nannochloropsis gaditana|type=mRNA|length=1362bp
ATGTGCCCGCTGAGTTTTCTCGTTTCGAATGTCTTTGAAAGGTATGTCTT
CATCTGTGCCTTACGGCAGCTTAACGAGTCTTTCGGTGTCACAACAGCCC
TCTGCAGTCTCACGAGTCGTTTAATCTCCTACAATCGAACTCCCGGAGGG
CCGTGCACAAACCTTACCTCACCGGTAGACTTCGTTATGTCCTGTGATGG
GGCACCAGGCGGTCTTAGAATCACAGAATCTCTTTTTGGGAAGCAAGGCG
GTATTGATGGTATTTCTGTTCACCGTTACGACTGCTCGAATGGCCGCGTC
CACGTCTCCTTGCTTGATTTTGGTGCCACTCTGTTCTCGGTACAAGTTCC
TGACCGTGATGGAAAAATTGAAGAAGTGACCCTGAATGTCACTTCTTTGG
ATCAGTTGCTCCACAAAAACATGTATTTCGGGTCGACAGTGGGTCGGGTG
GCAAATCGTGTGGCGAATGGAAGATTCACTCTGGACGGAAAGGTTTATAC
ACTTGCCAAGAACAATGGACCAAATCATCTTCACGGGGGAAAGGAAGGAT
TTGACCAAAAGATATGGAAAGGTTACCCTTTTACTTCGGCTTCTGCTGTG
GGCGTGTGTTTCACTCTGGACAGCCCTGACGGTGAAGAGGGTTATCCCGG
TAACGTGGCGATACAGGTGACCTACAGCCTTTTGGCCGGCGAGGATGTCT
TGGAGATGGACGTGAAAGCCGAGACAGACGCAGCAACGCCTTTAGCCTTG
AGCAATCACGCATATTGGAATCTAAGCGGGAACCTGAAAAATAAGATCTA
CGACCATAAGCTTCGTGTGGCTGCCTCCAGCATTTTGGAGGTCGGACCGC
ACCAGATCCCTACAGGAGTTTTTCAACCCGTCTTGCAAACGCCATTCGAC
CTGCGCGCTGAAGAAGGGATTAGCCTTGGCGATCGCATCCAACAAATTGA
CGGGGGTGGGAAAGCAGGCTTTGACCATTGTTTTGTCGTGGACGGCTACG
ACAGGGCAGCATCACGAGAGAAGTCAGAACATGTGAGGGATGCGGAGGAC
GAGGTGCAAGAAAAAGGTAGTCCGGAGAGTTGGATTCGTGCCCGCGCCCG
TTTTATGGCAACTCTCGTCGATCCTAAAAGTGGACGGGCCATGGACGTCC
GCGGTACCCAGCCAGGTCTTCAAGTATACACCGCGAACTGGTTAGACGAA
GAAGATGGGCAACAACATGCTGCTGTATGCTTAGAGACTGAATTCTTTCC
AAATGCCGTAAATGATCCGAAAGTAGGCTCCGTAGACGATGTTATCTTAA
GGCCTGGTCAAATATACAGACACTTCACATCCCACCGTTTCTACAACTTG
CCGAAGCCGTGA back to topprotein sequence of rna1328 >rna1328-protein ID=rna1328-protein|Name=rna1328|organism=Nannochloropsis gaditana|type=polypeptide|length=525bp
MMSHFVSHREIHPDVLSHPHDGIATVGMGKKDKKAAAAANGEAAAATGLP
STEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRP
LKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCL
IVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQ
RPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVH
LGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYL
RRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDE
VVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGL
GPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPAAQSGAGERV
ESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDEGNGGEAKKKKKKKEKKR
PAEGSASSPEAAEKKKKKKKSKGEE back to topmRNA from alignment at CM002457.1:356469..358674+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1328 ID=rna1328|Name=rna1328|organism=Nannochloropsis gaditana|type=mRNA|length=2206bp|location=Sequence derived from alignment at CM002457.1:356469..358674+ (Nannochloropsis gaditana)
ACTGATCAATGTAGAACCGCATACTTAGCGTCTCCTCTTGGGATTGCTGC
CGACTTGGCATGATGTCCCACTTTGTGTCGCATCGTGAGATTCACCCTGA
CGttctctcccatccccaTGACGGCATAGCAACTGTaggaatgggaaaga
aggacaagaaggcaGCCGCGGCGGCGAATGGAGAGGCCGCAGCCGCAACC
GGTCTACCATCCACAGAATTTATGATTAAACCCGAAACCGCGACGCCCAA
ATTGGATACGTCTACTTGGCCCCTACTCCTTAAAAATTATGACCAGCTGC
ATGTCCGAACGGCGCGATACACTCCCATCCCTATGGGGTCGTCGCCCCTC
AAGCGGCCACTGAAAGAATATTTGCGATACGGTGTGATCAATTTGGACAA
GCCTGCCAATCCGTCGTCGCACGAGGTGGTGGCGTGGATCAAGCGGATTC
TGCGTGTGGAGAAGACCGGGCACTCCGGCACGTTGGATCCCAAGGTCACG
GGTTGTTTGATCGTGTGCATAGACAGGGCCACGCGGTTGGTCAAAGCTCA
ACAGGGTGCAGGAAAGGAATACGTGGGCGTGGTTCGTTTGCACGGTGCCA
TCGAAGGGGAGAGCAAGCTGGTGCGTGCGGTTGAGACCCTGACCGGCGCT
CTCTTCCAACGACCACCCCTTATCGCCGCAGTCAAACGGCAGCTCCGCAT
TCGGACAATCTACGAGAGCAAACTGTTAGAATACGACGAGAAGCGGCATT
TGGGGGTGTTTTGGGTGAGCTGCGAGGCCGGAACGTACATACGGACGCTG
TGTGTGCATCTGGGGTTGCTGGTGGGCACCGGGGGGCATATGCAGGAGCT
TCGACGGGTCAGATCGGGGGTTTTGACGGAGAACGACCATCTCATGACCA
TGCACGATGTGCTGGACGCTCAATATGCCTACGATACGTATAAGGATGAA
TCGTACCTTCGGCGGGCGGTCTTGCCCTTGGAAATCCTGTTCGCGAATAC
GAAGCGGGTTGTGGTGAAGGACAGCGCGGTGAACGCCATATGTTACGGGG
CCCGTCTAATGATACCTGGCCTGCTTCGCTTCGCGGACGGCATTGAGGTC
AACGACGAGGTCGTGATGGTGACGACAAAGGGCGAGGCCATCGCCGTAGG
CATCGCCCAGATGACCACAGCGGTCATGGCGACGTGCGACCATGGGATGG
TAGCGAAGATCAAGCGGGTGGTGATGGAGCGGGACACCTATCCACGGCGG
TGGGGGTTGGGCCCGGtggcgacgaagaagaaagggctgatgaaggaagg
gaagtTGGACAAGCATGGAAGACCGAACGCGGAAACGCCCCAAGACTACC
TGGAAGCATTTGAGGGGAAAAATGGACCTGCGGCTCAATCGGGtgcgggg
gaaagggtggaaagcggagaagcgaaggaagtgaagaaggagaaaaaaag
taagaaggaaaaggcagttgccgcggaggagatggtggctGCAACAAGCG
GTGACGAAGGAAATGGCGGAGaggcgaaaaagaagaagaagaagaaggaa
aagaagcggcCTGCTGAAGGAAGTGCCTCATCACCCGAGGctgcggagaa
gaagaagaagaaaaagaagagcaagggcgAGGAATGACAGGGGTATTTAA
GACAAGAAAATTGTCATTGTGGGCGCGCGCAGATGCAGCAGTGACAGTTT
ACATGCAGACATGAAGCAGGAAACTTTTGTATGTCTGCCATTGATTGCGA
GTGACAGGTGTCAAGGATGGTAGACGTATTGACTTCTCCAGTCCGAGCCA
TGGCCAGAGGACCCAAAACGCATAAAATTGAGGTAACCCCCTTAGACTCA
AgcaggaaagaagaggacgagcaCTAAAACATCTAAGGCATGAGTTACAG
TAGCAATATGAGATGACAACACGATACTGATTGGTAGGCTTTCATTGCCG
ATAAGTTTCGATGATTACTTCGCTTGGGATTCGAAATTTTATTTCAGCTT
ATTCTACCGGGAAACGGCGGGCCATAGACGACAACGTCCGATGACGGCCG
TGGTAAATGGCCGCACGCGCACTCCacgctttttttttttacaagaaagg
aaaaaattgaaagggttgaagaggaaagtggaagCTGCACTCTGTATGCA
CACTGTCTGAGAGGATTTGACGCTACCGTGCTGTCTCCCGGTATCAGTCT
TCGCGC back to topCoding sequence (CDS) from alignment at CM002457.1:356469..358674+ >rna1328 ID=rna1328|Name=rna1328|organism=Nannochloropsis gaditana|type=CDS|length=1578bp|location=Sequence derived from alignment at CM002457.1:356469..358674+ (Nannochloropsis gaditana)
ATGATGTCCCACTTTGTGTCGCATCGTGAGATTCACCCTGACGttctctc
ccatccccaTGACGGCATAGCAACTGTaggaatgggaaagaaggacaaga
aggcaGCCGCGGCGGCGAATGGAGAGGCCGCAGCCGCAACCGGTCTACCA
TCCACAGAATTTATGATTAAACCCGAAACCGCGACGCCCAAATTGGATAC
GTCTACTTGGCCCCTACTCCTTAAAAATTATGACCAGCTGCATGTCCGAA
CGGCGCGATACACTCCCATCCCTATGGGGTCGTCGCCCCTCAAGCGGCCA
CTGAAAGAATATTTGCGATACGGTGTGATCAATTTGGACAAGCCTGCCAA
TCCGTCGTCGCACGAGGTGGTGGCGTGGATCAAGCGGATTCTGCGTGTGG
AGAAGACCGGGCACTCCGGCACGTTGGATCCCAAGGTCACGGGTTGTTTG
ATCGTGTGCATAGACAGGGCCACGCGGTTGGTCAAAGCTCAACAGGGTGC
AGGAAAGGAATACGTGGGCGTGGTTCGTTTGCACGGTGCCATCGAAGGGG
AGAGCAAGCTGGTGCGTGCGGTTGAGACCCTGACCGGCGCTCTCTTCCAA
CGACCACCCCTTATCGCCGCAGTCAAACGGCAGCTCCGCATTCGGACAAT
CTACGAGAGCAAACTGTTAGAATACGACGAGAAGCGGCATTTGGGGGTGT
TTTGGGTGAGCTGCGAGGCCGGAACGTACATACGGACGCTGTGTGTGCAT
CTGGGGTTGCTGGTGGGCACCGGGGGGCATATGCAGGAGCTTCGACGGGT
CAGATCGGGGGTTTTGACGGAGAACGACCATCTCATGACCATGCACGATG
TGCTGGACGCTCAATATGCCTACGATACGTATAAGGATGAATCGTACCTT
CGGCGGGCGGTCTTGCCCTTGGAAATCCTGTTCGCGAATACGAAGCGGGT
TGTGGTGAAGGACAGCGCGGTGAACGCCATATGTTACGGGGCCCGTCTAA
TGATACCTGGCCTGCTTCGCTTCGCGGACGGCATTGAGGTCAACGACGAG
GTCGTGATGGTGACGACAAAGGGCGAGGCCATCGCCGTAGGCATCGCCCA
GATGACCACAGCGGTCATGGCGACGTGCGACCATGGGATGGTAGCGAAGA
TCAAGCGGGTGGTGATGGAGCGGGACACCTATCCACGGCGGTGGGGGTTG
GGCCCGGtggcgacgaagaagaaagggctgatgaaggaagggaagtTGGA
CAAGCATGGAAGACCGAACGCGGAAACGCCCCAAGACTACCTGGAAGCAT
TTGAGGGGAAAAATGGACCTGCGGCTCAATCGGGtgcgggggaaagggtg
gaaagcggagaagcgaaggaagtgaagaaggagaaaaaaagtaagaagga
aaaggcagttgccgcggaggagatggtggctGCAACAAGCGGTGACGAAG
GAAATGGCGGAGaggcgaaaaagaagaagaagaagaaggaaaagaagcgg
cCTGCTGAAGGAAGTGCCTCATCACCCGAGGctgcggagaagaagaagaa
gaaaaagaagagcaagggcgAGGAATGA back to top
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