EWM29366.1, cds1326 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|585111894|gb|EWM29366.1| (h aca ribonucleoprotein complex subunit 4 [Nannochloropsis gaditana]) HSP 1 Score: 1074.31 bits (2777), Expect = 0.000e+0 Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 0 Query: 1 MMSHFVSHREIHPDVLSHPHDGIATVGMGKKDKKAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPAAQSGAGERVESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDEGNGGEAKKKKKKKEKKRPAEGSASSPEAAEKKKKKKKSKGEE 525 MMSHFVSHREIHPDVLSHPHDGIATVGMGKKDKKAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPAAQSGAGERVESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDEGNGGEAKKKKKKKEKKRPAEGSASSPEAAEKKKKKKKSKGEE Sbjct: 1 MMSHFVSHREIHPDVLSHPHDGIATVGMGKKDKKAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPAAQSGAGERVESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDEGNGGEAKKKKKKKEKKRPAEGSASSPEAAEKKKKKKKSKGEE 525
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|553184600|ref|XP_005854117.1| (H/ACA ribonucleoprotein complex subunit 4 [Nannochloropsis gaditana CCMP526] >gi|422294938|gb|EKU22238.1| H/ACA ribonucleoprotein complex subunit 4 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1014.6 bits (2622), Expect = 0.000e+0 Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0 Query: 28 MGKKDKKAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPAAQSGAGERVESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDEGNGGEAKKKKKKKEKKRPAEGSASSPEAAEKKKKKKKSKGEE 525 MGKKDKKAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPAAQSGAGERVESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDEGNGGEAKKKKKKKEKKRPAEGSASSPEAAEKKKKKKKSKGEE Sbjct: 1 MGKKDKKAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPAAQSGAGERVESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDEGNGGEAKKKKKKKEKKRPAEGSASSPEAAEKKKKKKKSKGEE 498
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|224003359|ref|XP_002291351.1| (hypothetical protein THAPSDRAFT_508 [Thalassiosira pseudonana CCMP1335] >gi|220973127|gb|EED91458.1| hypothetical protein THAPSDRAFT_508 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0 Identity = 326/430 (75.81%), Postives = 369/430 (85.81%), Query Frame = 0 Query: 55 MIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPA-AQSGAGERVESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDE 483 MI P + TPKLDTS WPLLLKNY LH+RT+ YTPIP GSSPL R LK+++ GVINLDKPANPSSHEVV+WIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQ AGKEYVGVVRLH A+E +L RAVETLTGALFQRPPLI+AVKRQLRIRTIYESKL+EYDEKR+LG+FWVSCEAGTY+RTLCVHLGLLVGTGGHMQELRRVRSGVL END+L+TMHDV+DAQ+ YDT KDE YLRR V+PLE L N KR+VVKDSAVNAICYGA+LMIPGLLRFAD I++N EVV++TTKGEAIAVGIAQMTTAVMATCDHG+VAKIKRV+MERDTYPRRWGLGP+A +KKGL+KEGKLDKHG+PN +TP+D+LE ++ G A A + G S K +++K + A +E + SGDE Sbjct: 1 MIAPSSHTPKLDTSAWPLLLKNYSDLHIRTSHYTPIPCGSSPLARNLKDHISSGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGVVRLHSALEDTKQLHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDEKRNLGIFWVSCEAGTYVRTLCVHLGLLVGTGGHMQELRRVRSGVLDENDNLVTMHDVMDAQHVYDTTKDEKYLRRVVMPLETLLTNYKRIVVKDSAVNAICYGAKLMIPGLLRFADDIDINQEVVLMTTKGEAIAVGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPMAQRKKGLIKEGKLDKHGKPNEKTPKDFLEGYKSVEGAAKAPTLGGANGGSTTTPAKIKSEEAKPDSPTAMDE--DSNSGDE 428
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|397574046|gb|EJK48998.1| (hypothetical protein THAOC_32164 [Thalassiosira oceanica]) HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 314/412 (76.21%), Postives = 360/412 (87.38%), Query Frame = 0 Query: 30 KKDKKAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPA 441 K K A NGEA + G + MI+P TPKLDTS WPLLLKNY LH+RT+ YTPIP GSSPL R LK+++ GVINLDKPANPSSHEVV+WIKRILRVEKTGHSGTLDPKVTGCLIVC+DRATRLVKAQQ AGKEY+GVVRLH AI+ KL RAVETLTGALFQRPPLI+AVKRQLRIRTIYESKL+EYD++R+LG+FWVSCEAGTY+RTLCVHLGLLVGTGGHMQELRRVRSGV+ E D+L+TMHDV+DAQ+ +DT KDE YLRR V+PLE+L N KRVVVKDSAVNAICYGA+LMIPGLLRFAD I++N EVV++TTKGEAIAVGIAQMTTAVMATCDHG+VAKIKRV+MERDTYPRRWGLG +AT+KK L+KEGKLD++G+ N +TP+D+LE ++ +G A Sbjct: 34 KHSSKKRKAENGEAEDSGG---AQPMIEPSKHTPKLDTSNWPLLLKNYSDLHIRTSHYTPIPCGSSPLARNLKDHISSGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKAQQSAGKEYIGVVRLHSAIDDNKKLHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDDQRNLGIFWVSCEAGTYVRTLCVHLGLLVGTGGHMQELRRVRSGVMAEKDNLVTMHDVMDAQHVFDTTKDEKYLRRVVMPLEVLLTNYKRVVVKDSAVNAICYGAKLMIPGLLRFADDIDINQEVVLMTTKGEAIAVGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGAMATRKKALIKEGKLDRYGKVNEKTPKDFLEGYKSVDGAA 442
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|1072229922|gb|OEU14656.1| (Dkc1 protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 318/463 (68.68%), Postives = 372/463 (80.35%), Query Frame = 0 Query: 28 MGKKDKKAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFE--GKNGPAAQSGAGERVESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDEGNGGE 488 MG KK N + A S+ MI P +TPKLDTS WPLLLKNY QLHVRT+ YTP+P GSSPL RPL +L YGVINLDKPANPSSHEVV+WIK+ILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVK+QQ AGKEYV V RLH A + +K+ R+VETLTGALFQRPPLI+AVKRQLRIRTIYESKLLEYDE+R+LGV W+SCEAGTY+RTLCVHLGLL G GGHMQELRRVRSG L E D+L+TMHDVLDAQ+ YDT KDE+YLRR V+PLE+L KR+VVKDSAVNAICYGA+ MIPGLLRFADGIE+NDEVV++TTKGEAIAV IAQMTTAVMAT DHG+VAKIKRV+MERD YPRRWGLGP+A +KK ++K+GKLDKHG+PN +TP D+L++++ K+ P A SG G ++++ K E + ++ + + D GN + Sbjct: 1 MGSSTKKRK---NDDGTAVAVASSSTSMIAPSNSTPKLDTSNWPLLLKNYHQLHVRTSHYTPLPCGSSPLARPLNHHLSYGVINLDKPANPSSHEVVSWIKKILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQSAGKEYVAVARLHSACD-VAKVQRSVETLTGALFQRPPLISAVKRQLRIRTIYESKLLEYDEERNLGVLWLSCEAGTYVRTLCVHLGLLTGAGGHMQELRRVRSGALAEKDNLVTMHDVLDAQHVYDTTKDETYLRRVVMPLEVLLTKYKRIVVKDSAVNAICYGAKFMIPGLLRFADGIELNDEVVLMTTKGEAIAVAIAQMTTAVMATVDHGVVAKIKRVIMERDVYPRRWGLGPMAQRKKSMIKDGKLDKHGKPNEKTPTDFLKSYKDFSKSKPPALSGEGAASSPAKSEDAKIETTNGEDNDDSKKRSKEDRGSDSGNSSD 459
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|551658687|ref|XP_005832113.1| (hypothetical protein GUITHDRAFT_71484 [Guillardia theta CCMP2712] >gi|428176248|gb|EKX45133.1| hypothetical protein GUITHDRAFT_71484 [Guillardia theta CCMP2712]) HSP 1 Score: 656.751 bits (1693), Expect = 0.000e+0 Identity = 305/416 (73.32%), Postives = 360/416 (86.54%), Query Frame = 0 Query: 53 EFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPAAQSGAGERVESGEAKEVKKEKKSKKEK 468 ++ IKPE TPK+DTS WPLLLKNYD+L++RT YTPIP G SPLKRP+ EY+RYGVINLDKPANPSSHEVVAWI+RILRV+KTGHSGTLDPKVTGCLIVC++RATRLVK+QQGAGKEYV + RLHGAIE E+K +A+E L GA+FQRPPLI+AVKRQLRIRTIYESK++E+D++R+LGVFW+SCEAGTY+RT+CVH+GLL+G GGHMQELRRVRSG LTE+D+LMTMHDVLDAQ+ YDTYKDESYLRR +LPLE L KRVVVKDSAVNAICYGA+LMIPGLLRF DGIE+ E+VM+TTKGEAI +GIAQMTTAVMATCDHG+VAKIKRV+MERDTYPRRWGLGP A KK ++ +GKLDK+GRPNA TP ++ ++ +G + +VES + +E KK KKE+ Sbjct: 18 DYTIKPEDVTPKIDTSNWPLLLKNYDKLNIRTGHYTPIPNGCSPLKRPILEYVRYGVINLDKPANPSSHEVVAWIRRILRVDKTGHSGTLDPKVTGCLIVCVERATRLVKSQQGAGKEYVSIARLHGAIESENKFAKALEKLKGAIFQRPPLISAVKRQLRIRTIYESKMIEFDKERNLGVFWISCEAGTYVRTMCVHIGLLLGVGGHMQELRRVRSGALTEHDNLMTMHDVLDAQWMYDTYKDESYLRRVILPLERLLTGYKRVVVKDSAVNAICYGAKLMIPGLLRFEDGIEIGTEIVMITTKGEAICLGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPQAKAKKQMIIDGKLDKYGRPNANTPSNWQNLYKDLSGNQSTPA---KVES-QKEEEPASKKRKKER 429
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|1210529302|dbj|GAX11936.1| (H/ACA ribonucleoprotein complex subunit 4 [Fistulifera solaris]) HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0 Identity = 320/445 (71.91%), Postives = 367/445 (82.47%), Query Frame = 0 Query: 28 MGKKDK-KAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVET-LTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFE--GKNGPAAQSGAGER-VES-GEAKEVKKEKKSKK 466 MG K K A++G A T S MI+P + TPKLDTS WPLLLKNY +LH+RTA YTP+P GSSPL R L ++L YGVINLDKPANPSSHEVV+WIKRILRVEKTGHSGTLDPKVTGCLIVC+DRATRLVKAQQ AGKEY+GV+RLH A+E L RA+ET L GALFQRPPLI+AVKRQLRIRTIY+SKLLE+D +R LGVFWV CEAGTY+RTLCVH GLLVGTGGHMQELRRV+SGVL E D+++TMHDVLDAQ+ YD KDE+YLRR V+PLE+L N KR+VVKDS VNAICYGA+ MIPGLLRFADGIE+ EVV++TTKGEAIAV +AQMTTAVMATCDHG+VAKIKRV+MERD YPRRWGLGP+A +KK L+KEGKLDKHG+PN +TP D+L +++ K+ P A SG GE VE+ EA EV KK Sbjct: 1 MGSDSKAKKRKASDGGAIVET---SVGAMIQPASHTPKLDTSQWPLLLKNYHELHIRTAHYTPLPTGSSPLARTLPQHLSYGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCLDRATRLVKAQQSAGKEYIGVLRLHDALEDTKVLQRAMETTLRGALFQRPPLISAVKRQLRIRTIYDSKLLEFDAERRLGVFWVQCEAGTYVRTLCVHAGLLVGTGGHMQELRRVKSGVLGEADNMVTMHDVLDAQHVYDQTKDETYLRRVVMPLEVLLTNYKRLVVKDSCVNAICYGAKFMIPGLLRFADGIEIGTEVVLMTTKGEAIAVAVAQMTTAVMATCDHGVVAKIKRVIMERDVYPRRWGLGPMAQRKKNLIKEGKLDKHGKPNDQTPSDFLTSYKDFSKSNPPALSGGGEALVETPAEAMEVDDNGDGKK 442
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|1210527166|dbj|GAX14139.1| (H/ACA ribonucleoprotein complex subunit 4 [Fistulifera solaris]) HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0 Identity = 317/448 (70.76%), Postives = 366/448 (81.70%), Query Frame = 0 Query: 28 MGKKDK-KAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVET-LTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFE--GKNGPAAQSGAGERV--ESGEAKEVKKEKKSKKEKA 469 MG K K A++G A T S MI+P + TPKLDTS WPLLLKNY +LH+RTA YTP+P GSSPL R L ++L YGVINLDKPANPSSHEVV+WIKRILRVEKTGHSGTLDPKVTGCLIVC+DRATRLVKAQQ AGKEY+GV+RLH A+E L RA+ET L GALFQRPPLI+AVKRQLRIRTIY+SKLLE+D +R LGVFWV CEAGTY+RTLCVH GLLVGTGGHMQELRRV+SGVL E D+++TMHDVLDAQ+ YD +DE+YLRR V+PLE+L N KR+VVKDS VNAICYGA+ MIPGLLRFADGIE+ EVV++TTKGEAIAV IAQMTTAVMATCDHG+VAKIKRV+MERD YPRRWGLGP+A +KK L+KEGKLDKHG+PN +TP D+L +++ K+ P A SG+ E + E EV + KK A Sbjct: 1 MGSDSKAKKRKASDGGAIVET---SVGAMIQPASHTPKLDTSQWPLLLKNYHELHIRTAHYTPLPTGSSPLARTLPQHLSYGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCLDRATRLVKAQQSAGKEYIGVLRLHDALEDTKVLQRAMETTLRGALFQRPPLISAVKRQLRIRTIYDSKLLEFDAERRLGVFWVQCEAGTYVRTLCVHAGLLVGTGGHMQELRRVKSGVLGEADNMVTMHDVLDAQHVYDQTRDETYLRRVVMPLEVLLTNYKRLVVKDSCVNAICYGAKFMIPGLLRFADGIEMGTEVVLMTTKGEAIAVAIAQMTTAVMATCDHGVVAKIKRVIMERDVYPRRWGLGPMAQRKKNLIKEGKLDKHGKPNDQTPSDFLTSYKDFSKSNPPALSGSSEAIVETPAEGMEVDDDGDDKKRPA 445
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|813102261|ref|XP_012193765.1| (H/ACA ribonucleoprotein complex subunit 4 [Saprolegnia parasitica CBS 223.65] >gi|641541680|gb|KDO35425.1| H/ACA ribonucleoprotein complex subunit 4 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0 Identity = 300/388 (77.32%), Postives = 341/388 (87.89%), Query Frame = 0 Query: 55 MIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPAA 442 +I PET+TPKLDTS WPLLLKNY L+VRT YTPIP GS+PLKR + +Y+RYGVINLDKPANPSSHEVVAWI+RILRVEKTGHSGTLDPKVTGCLIVC+DRATRLVK+QQGAGKEYV +VRLH AIE ++ + RA+ETLTGALFQRPPLI+AVKRQLRIRTIY SKL+EYD +RHLGVF VSCEAGTYIRTLCVHLGL++G G HMQELRRVRSGVL E D ++TMHDVLDAQYA+DTYKDESYLRR V PLE+L KR+VVKDSAVNA+CYGA+ M+PGLLRFAD I+VN+EVV++TTKGEAIA+GIAQMTTAVMATCDHG+VAKIKRV+MERDTYPRRWGLGP+A K KGL+KEGK+ K G+ N TP D + + P A Sbjct: 16 LIAPETSTPKLDTSKWPLLLKNYSDLNVRTGHYTPIPSGSTPLKRNIHDYIRYGVINLDKPANPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQGAGKEYVAIVRLHSAIESQATMARAIETLTGALFQRPPLISAVKRQLRIRTIYSSKLIEYDNERHLGVFHVSCEAGTYIRTLCVHLGLVLGVGAHMQELRRVRSGVLGEADTMVTMHDVLDAQYAFDTYKDESYLRRIVRPLEVLLTTYKRIVVKDSAVNAVCYGAKFMVPGLLRFADDIDVNEEVVLMTTKGEAIAIGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPMAQKVKGLVKEGKIGKFGKVNEATPADVSAVYSKQAAPVA 403
BLAST of EWM29366.1 vs. NCBI_GenBank
Match: gi|219120454|ref|XP_002180965.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407681|gb|EEC47617.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0 Identity = 326/495 (65.86%), Postives = 385/495 (77.78%), Query Frame = 0 Query: 31 KDKKAAAAANGEAAAATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAIEGESKLVRAVET-LTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFE--GKNGPAAQSGAGERVESGEAKEVKKEKKSKKEKAVAAEEMVAATSGDEGNGGEAKKK-----KKKKEKKRPAEGSASSPEAAEKKKK 517 K K A +G A A T S MI P + TPKLDTS WPLLLKNY +LHVRTA YTP+P GSSPL R L+++L+YGVINLDKPANPSSHEVV+WIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQ AGKEY+GVVRLH A++ +L RA+ET LTGALFQRPPLI+AVKRQLRIRTIY+SKLLE+D +R+LGVFWV CEAGTYIRTLCVH GLLVGTGGHMQELRRV+SGVL E D+L+T+HDV+DAQ+ YDT KDE+YLRR V+PLE L N KR+VVKDSAVNAICYGA+LMIPGLLRFAD IE+N EVV++TTKGEAIAV +AQMTTAVMAT DHG+VAKIKRV+MERD YPRRWGLGP+A +KK ++KEGKLDKHG+PN +TP ++L++++ K+ P G GE G A VA+++GD+ E++KK K + + P + + +K KK Sbjct: 6 KSAKKRKADDGSAVAET---SAGPMITPSSHTPKLDTSKWPLLLKNYHELHVRTAHYTPLPTGSSPLARTLEQHLQYGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYIGVVRLHAALDDPKQLTRAIETTLTGALFQRPPLISAVKRQLRIRTIYDSKLLEFDGERNLGVFWVKCEAGTYIRTLCVHAGLLVGTGGHMQELRRVKSGVLGEEDNLVTLHDVMDAQHVYDTTKDETYLRRVVMPLETLLTNYKRIVVKDSAVNAICYGAKLMIPGLLRFADDIELNQEVVLMTTKGEAIAVALAQMTTAVMATVDHGVVAKIKRVIMERDVYPRRWGLGPMAQRKKSMIKEGKLDKHGKPNEKTPSNFLDSYKDYSKSKPPVLDGNGEPTTPGSAS-------------------VASSNGDKMEVDESEKKRPSSPKSEDDDDAPQKKKDKKDKKKKKDKK 478 The following BLAST results are available for this feature:
BLAST of EWM29366.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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