rna1319, rna1319 (mRNA) Nannochloropsis gaditana

Overview
Namerna1319
Unique Namerna1319
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1323
Alignment locationCM002457.1:321623..322598 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100028g39.3303.mrna
Orig protein idgnl|cribi|Naga_100028g39.3303
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:321623..322598 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100028g39gene1273Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1319rna1319-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29367.1cds1317Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1319 ID=rna1319|Name=rna1319|organism=Nannochloropsis gaditana|type=mRNA|length=1323bp
ATGATGCGGTACGTGGCAATGGAGACCCGCCAGGCGATCAAACGCGACTT
TGACGATTTCTCGCAGGGCCGCCCCAGCTTTCGGTCCTTTGCCATCCAGC
ACCGGTTGAGCTACGAGCTGAACGCCGCGCCCCGTCGGTGTCGGGTGAAA
CCCTTGATGGGAGGCCTCTTAGGGGTGCGCCTTTACGAATTGGAGAGCTT
CGCCTGGTTCGCGCCCCTGTTGGATTTCTTGGCGGCGCAATGGTGGGAGG
TGGCCGTGATCATGTTCTGCGAGGAGGTCCGGCGGGAGGAAGGGGCTCAG
GAGCGGGGGAGGTTGGAGGCGTACCTGAAGGAAGCAGGGAAGAGCCTGGC
GCGGCGGCGGGCGGTCATGACGTCCTTGATTGGTTCGGTGCATCTCCGGA
GTTACGACCAGGCGGAGACGCAGGTGGGCCGGCTGGGTCCTCGGTACGGG
CATCTGATGATGGTTTTGAATATCCATGGGAACGGAGAAGTGGTGTTTCG
GAGGGTGAGGGAGAGGAGGAAAGGGAGGGGCACGGAGGGGGATGGGGAGG
AGGGGGAGGAGGGGGGCAAAGGGGGAACGAAAGGAAGGGAGGACGGGAAG
GACGGAAGCCGTGTGGAGGACGGGGAAGGAAAGGAGGGCGAGGAGGAAAG
GGGCGGGTTGGAGGCAGGAGGACAGGGGGGGGGCGAAGAAAAGAGGGAGG
GAGAAGGTGAGAAGGAGGGGGAGAAGGAAGAAGTGGAGGAAGAGGAAGTG
CTGCGCCTCCCCTTGAAATCGGGTGACGTGTACTGCTACACAGGAAAGTA
TCGGTATGGGTGTGCGGAGCGTGTGGAATTGAATGCGAAGGCCTCGCCAT
ACCGATGTTTTATCGCCTTCCGGTTCTGGATACCCGGGCGGGAGTGGCTG
GTTCGGATGAGTAAGGCGGAGGGGGCGAGTGAGGGAGGGGCGGACGGCAG
GTTTGTCGGCTGGCGGAAATTGGAGAAGGAAGACAAAGAGAGAGACACCA
GGTGGGGTCAAGGGAATAAAACTGCGGCTCGCCCCAGCTACGCCGGCTTG
AGTCGCGTGCTGTCCGAGGCCGACGGAGGAGGGGGGGAGGGCGGGAAGGG
GAAAGGGAAGGGCAAAGGGAAAGGGAAGGAAGGACAGGGCGAGTCGAGGG
CCGAGAAGGGGAAGGAAACGGCTGATAGGGAACGAGGGGGAGCGATGGAG
GTGGAGGAGACATCGGTACCGGAGCCATGTGCTGCCTTAGGCAAGGAAGG
TGAGAGACAAGGCGATGTGGAGGAGGAGAGGGAGGGAGAGGGAGCGACGG
AGATGGTGGCGATGCAAGTGTAG
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protein sequence of rna1319

>rna1319-protein ID=rna1319-protein|Name=rna1319|organism=Nannochloropsis gaditana|type=polypeptide|length=208bp
MSEEEVVTGDEAPSGSGHRIKIKMTNEGRVLEEKGPSKGISPLSPLPPPH
EGPAGGSVDGKHELNKVERAPETSSGIPASSPGTEPAGSTLSPPLGRADI
EHSISSETAEGRNEGRPLCAETLASPESTPASTAPPKKKTSKAKRQRAPG
PGKAPVEPTSLPVADVEAQQVTEESSSGPSASCAPPSAPPPGSHGHLRRQ
QPRHGQQG
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mRNA from alignment at CM002457.1:321623..322598-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1319 ID=rna1319|Name=rna1319|organism=Nannochloropsis gaditana|type=mRNA|length=976bp|location=Sequence derived from alignment at CM002457.1:321623..322598- (Nannochloropsis gaditana)
ATGTCGGAGGAGGAGGTGGTCACCGGCGACGAGGCTCCTTCGGGCTCGGG
ACACAGAATTAAGATCAAAATGACGAACGAAGGCCGTGTCCTAGAAGAAA
AAGGTCCCTCAAAAGGGATCTCTCCTCTCTCCCCTCTCCCGCCTCCGCAT
GAAGGCCCAGCTGGAGGCAGCGTGGATGGGAAGCACGAGCTAAACAAGGT
GGAAAGAGCCCCCGAAACCTCGTCTGGAATGTACGTGCGCGGAGGGGAGG
GACAGAAGACTGAGGGTATCAATGACGTTCACGTTTTCCTCGAACCCGTT
CCATCACATGCTGTAATCAAATCACCTCTTAGACGAATATTTCCTGCTTT
CATTTAAGCATTGAACAGAATGATTTTGGACGGAATTTGTTGAGGAGAAA
ATCAGATGCTTGCCTGTGGGATAGGCATCATAGTTCACAAACTATTGTTC
TGGCATTCCCTGTCGGCTCAACGCATTCCACCCCTAGTCAACTTCCTTCA
CTTTGTTACGTCGCATGATCCATATACAGACATGCCATTTACCTCATTAC
AGCTCTCCCACAATCCCCTCTCCCCCCAGACCTGCTTCTTCCCCCGGAAC
AGAGCCAGCCGGCAGCACGCTGTCACCACCATTGGGCCGAGCAGATATCG
AGCACAGCATTTCCTCGGAGACTGCGGAGGGAAGAAACGAAGGAAGGCCC
CTGTGTGCGGAGACCTTGGCGTCGCCCGAGAGCACGCCCGCTTCGACGGC
CCCCCCCAAGAAGAAGACCAGCAAGGCCAAAAGGCAGCGCGCTCCTGGCC
CCGGAAAAGCTCCCGTCGAGCCTACATCCCTCCCTGTGGCCGACGTGGAA
GCACAGCAGGTGACCGAGGAATCCTCCTCCGGCCCTTCCGCTTCCTGTGC
CCCGCCCTCCGCCCCCCCCCCCGGAAGCCATGGCCACCTCCGGAGGCAAC
AGCCCCGACACGGGCAGCAGGGGTGA
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Coding sequence (CDS) from alignment at CM002457.1:321623..322598-

>rna1319 ID=rna1319|Name=rna1319|organism=Nannochloropsis gaditana|type=CDS|length=1254bp|location=Sequence derived from alignment at CM002457.1:321623..322598- (Nannochloropsis gaditana)
ACCTGCTTCTTCCCCCGGAACAGAGCCAGCCGGCAGCACGCTGTCACCAC
CATTGGGCCGAGCAGATATCGAGCACAGCATTTCCTCGGAGACTGCGGAG
GGAAGAAACGAAGGAAGGCCCCTGTGTGCGGAGACCTTGGCGTCGCCCGA
GAGCACGCCCGCTTCGACGGCCCCCCCCAAGAAGAAGACCAGCAAGGCCA
AAAGGCAGCGCGCTCCTGGCCCCGGAAAAGCTCCCGTCGAGCCTACATCC
CTCCCTGTGGCCGACGTGGAAGCACAGCAGGTGACCGAGGAATCCTCCTC
CGGCCCTTCCGCTTCCTGTGCCCCGCCCTCCGCCCCCCCCCCCGGAAGCC
ATGGCCACCTCCGGAGGCAACAGCCCCGACACGGGCAGCAGGGGTGAATG
TCGGAGGAGGAGGTGGTCACCGGCGACGAGGCTCCTTCGGGCTCGGGACA
CAGAATTAAGATCAAAATGACGAACGAAGGCCGTGTCCTAGAAGAAAAAG
GTCCCTCAAAAGGGATCTCTCCTCTCTCCCCTCTCCCGCCTCCGCATGAA
GGCCCAGCTGGAGGCAGCGTGGATGGGAAGCACGAGCTAAACAAGGTGGA
AAGAGCCCCCGAAACCTCGTCTGGAATACCTGCTTCTTCCCCCGGAACAG
AGCCAGCCGGCAGCACGCTGTCACCACCATTGGGCCGAGCAGATATCGAG
CACAGCATTTCCTCGGAGACTGCGGAGGGAAGAAACGAAGGAAGGCCCCT
GTGTGCGGAGACCTTGGCGTCGCCCGAGAGCACGCCCGCTTCGACGGCCC
CCCCCAAGAAGAAGACCAGCAAGGCCAAAAGGCAGCGCGCTCCTGGCCCC
GGAAAAGCTCCCGTCGAGCCTACATCCCTCCCTGTGGCCGACGTGGAAGC
ACAGCAGGTGACCGAGGAATCCTCCTCCGGCCCTTCCGCTTCCTGTGCCC
CGCCCTCCGCCCCCCCCCCCGGAAGCCATGGCCACCTCCGGAGGCAACAG
CCCCGACACGGGCAGCAGGGGTGAATGTCGGAGGAGGAGGTGGTCACCGG
CGACGAGGCTCCTTCGGGCTCGGGACACAGAATTAAGATCAAAATGACGA
ACGAAGGCCGTGTCCTAGAAGAAAAAGGTCCCTCAAAAGGGATCTCTCCT
CTCTCCCCTCTCCCGCCTCCGCATGAAGGCCCAGCTGGAGGCAGCGTGGA
TGGGAAGCACGAGCTAAACAAGGTGGAAAGAGCCCCCGAAACCTCGTCTG
GAAT
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Synonyms
Publications