EWM29367.1, cds1317 (CDS) Nannochloropsis gaditana

Overview
NameEWM29367.1
Unique Namecds1317
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:322369..322598 -
Alignment locationCM002457.1:321623..322019 -

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Properties
Property NameValue
Protein idEWM29367.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100028g39.3303.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:322369..322598 -
CM002457.1supercontigCM002457.1:321623..322019 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29367.1 vs. NCBI_GenBank
Match: gi|585111895|gb|EWM29367.1| (hypothetical protein Naga_100028g39 [Nannochloropsis gaditana])

HSP 1 Score: 398.282 bits (1022), Expect = 6.518e-140
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 
Query:    1 MSEEEVVTGDEAPSGSGHRIKIKMTNEGRVLEEKGPSKGISPLSPLPPPHEGPAGGSVDGKHELNKVERAPETSSGIPASSPGTEPAGSTLSPPLGRADIEHSISSETAEGRNEGRPLCAETLASPESTPASTAPPKKKTSKAKRQRAPGPGKAPVEPTSLPVADVEAQQVTEESSSGPSASCAPPSAPPPGSHGHLRRQQPRHGQQG 208
            MSEEEVVTGDEAPSGSGHRIKIKMTNEGRVLEEKGPSKGISPLSPLPPPHEGPAGGSVDGKHELNKVERAPETSSGIPASSPGTEPAGSTLSPPLGRADIEHSISSETAEGRNEGRPLCAETLASPESTPASTAPPKKKTSKAKRQRAPGPGKAPVEPTSLPVADVEAQQVTEESSSGPSASCAPPSAPPPGSHGHLRRQQPRHGQQG
Sbjct:    1 MSEEEVVTGDEAPSGSGHRIKIKMTNEGRVLEEKGPSKGISPLSPLPPPHEGPAGGSVDGKHELNKVERAPETSSGIPASSPGTEPAGSTLSPPLGRADIEHSISSETAEGRNEGRPLCAETLASPESTPASTAPPKKKTSKAKRQRAPGPGKAPVEPTSLPVADVEAQQVTEESSSGPSASCAPPSAPPPGSHGHLRRQQPRHGQQG 208
[Close]
BLAST of EWM29367.1 vs. NCBI_GenBank
Match: gi|553190115|ref|XP_005855129.1| (hypothetical protein NGA_0112000 [Nannochloropsis gaditana CCMP526] >gi|422293928|gb|EKU21228.1| hypothetical protein NGA_0112000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 385.956 bits (990), Expect = 4.226e-135
Identity = 203/208 (97.60%), Postives = 203/208 (97.60%), Query Frame = 0 
Query:    1 MSEEEVVTGDEAPSGSGHRIKIKMTNEGRVLEEKGPSKGISPLSPLPPPHEGPAGGSVDGKHELNKVERAPETSSGIPASSPGTEPAGSTLSPPLGRADIEHSISSETAEGRNEGRPLCAETLASPESTPASTAPPKKKTSKAKRQRAPGPGKAPVEPTSLPVADVEAQQVTEESSSGPSASCAPPSAPPPGSHGHLRRQQPRHGQQG 208
            MSEEEVVTGDEAPSGSGHRIKIKMTNEGRVLEEKGPSKGISPLSPLPPPHEGPAGGSVDGKHELNKVE APETSSGIPASSPGTEPAGSTLS PLGRADIEHSISSETAEGRNEGRPLCAETLASPESTPASTAPPKKKTSKAKRQRAPGPG APVEPTSLPVADVE QQVTEESSSGPS SCAPPSAPPPGSHGHLRRQQPRHGQQG
Sbjct:    1 MSEEEVVTGDEAPSGSGHRIKIKMTNEGRVLEEKGPSKGISPLSPLPPPHEGPAGGSVDGKHELNKVETAPETSSGIPASSPGTEPAGSTLSLPLGRADIEHSISSETAEGRNEGRPLCAETLASPESTPASTAPPKKKTSKAKRQRAPGPGTAPVEPTSLPVADVETQQVTEESSSGPSPSCAPPSAPPPGSHGHLRRQQPRHGQQG 208
The following BLAST results are available for this feature:
BLAST of EWM29367.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585111895|gb|EWM29367.1|6.518e-140100.00hypothetical protein Naga_100028g39 [Nannochlorops... [more]
gi|553190115|ref|XP_005855129.1|4.226e-13597.60hypothetical protein NGA_0112000 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1319rna1319Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications