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Properties
| Property Name | Value |
|---|
| Product | Kua-ubiquitin conjugating enzyme hybrid, localization |
| Orig transcript id | gnl|cribi|Naga_100028g29.3314.mrna |
| Orig protein id | gnl|cribi|Naga_100028g29.3314 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:298701..300312 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1310 ID=rna1310|Name=rna1310|organism=Nannochloropsis gaditana|type=mRNA|length=1128bp
TGTGGCATGGGCGCAAGCGTAACAGATTCATGTTAGCCTCCGCAATGTCG
GGATATCGCCAGCACGGATGAGACTCGCCCAAGAAAACATCGTTTCAAAA
TAAAAGCCCCCCCACGACCCTCGAAAGGCCACGCTTAATGTTTGCTGCCA
TCCACGTGGATTTGGCAAATTTTACTCGTTTATGGTATTGCGCGTGGTGA
ACTAGAGGTAGATATTTCTCGGGCGTGGTTTTCCCCACAACTGAAACCCG
ATAATGGCTGATTTGAGCGACATGCTGATTCAAACCAATCCCGATACAGC
GACTCCCGAAAACCACCATGCTTCGCCGCCTTTTCTTCCTGACTCTCTCG
GCCGTGGTGGTCTTGACGGCCTCTGCTAAACAGGGGGATGGCGTGGACCT
CGACCCGAACGAGAAATTGCGCGTAGGTGTCAAATTCCGCCCGGACTCTT
GCGACATTAAGTCTAAGAAGGGTGACATGTTGTCAATGCATTACACGGGG
ACCCTGTACAAGGATGGGAGCAAGTTTGATTCAAGCTTGGACCGCAACCA
ACCTTTCGAATTCACGCTGGGGCAGGGCCAGGTTATCAAGGGTTGGGACA
ATGGCCTCTTGAACATGTGCGTGGGCGAGAAACGTCGTTTGACGATCCCG
TCGTCTCTTGGGTACGGAGACCGTGGCGCGGGTGCCAAGATCCCCGGCGG
TGCCACCTTGGTCTTCGAAGTGGAGCTTCTGGGCATCAACAACTCGGACA
AGGGCAAAGAGTTCTAAACGCGCACGGCCATCCAGACTATGAGGTAGGGT
CCGATAGACCAGAGTCCGGTGTAGGAATCTATGCGGGGATACTCAAGAGA
AAATTGTCAGCCGAAGATGAGTAGGGGAATAGAAAGAAGGGGTACCTGCA
AAGGATTCGGATGGTCTCGAGGCACAAGTGCTTTCGCCCCGTCGAAGGAC
TTCAGCAGGCAGCGAGATGAAGGGGTAACAGTTACAGAAAAAAAATCATG
ACCAAGACCGAACCGGCGCGAACGATGGGCTCCAGGCTATAAAACATAAC
ATTTTCTTTCATGTTTCCGGCTGAATGTTTCAGGTCTCACCGCAGTCGCG
CTTTGTCACCCCGGTGCGGGAACCACCC back to topprotein sequence of rna1310 >rna1310-protein ID=rna1310-protein|Name=rna1310|organism=Nannochloropsis gaditana|type=polypeptide|length=366bp
MKPYPIVTIATLAIGAVAVHGFVIPAPSSRRISHDPWSSTRFLRYVDVLQ
STTLPSDTPGISSNSIVTNGLYPSDPVDDASCVSTETNLPISLRNDRIVE
KKSKRRGPPPPVMVADGDVLESSWIHRSYVATHYLVTLAAMQQVASTYAG
NGGVTPGDLTMLAATTAFSVLFSDFFSGIFHWSVDNYGNGKTPVLGTVIE
AFQGHHDAPWTITYRQFSNNVHKITKITIPAMLAIVALHPSSPLVTLFAT
LFFNLQVLSQEFHKLSHLSKPPAWAVRLQDLGLIISRKEHGQHHSSPFES
NYCILTGTCNRMLDESGFFRFLEKAVYDVTGVMPNCWKQGSSEFRAEMLV
GRRGGADANMVDEKME back to topmRNA from alignment at CM002457.1:298701..300312- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1310 ID=rna1310|Name=rna1310|organism=Nannochloropsis gaditana|type=mRNA|length=1612bp|location=Sequence derived from alignment at CM002457.1:298701..300312- (Nannochloropsis gaditana)
AGTAATATGAAGCCCTACCCGATTGTCACTATTGCGACTCTAGCCATTGG
CGCAGTAGCTGTGCACGGCTTCGTTATCCCAGCCCCATCGTCTCGACGCA
TCTCGCACGATCCTTGGAGCTCCACCAGGTTTCTGCGATATGTCGACGTG
TTACAATCCACAACACTGCCGTCTGACACACCTGGTATCAGTAGTAATAG
CATAGTAACCAATGGCTTGTACCCGTCCGATCCAGTTGACGACGCAAGCT
GTGTATCTACAGAAACAAACCTTCCAATCTCCTTGAGGAACGACCGTATC
GTTGAGAAGAAGTCAAAGCGGAGAGGTCCACCGCCACCTGTCATGGTAGC
AGACGGTGACGTCCTGGAAAGTTCTTGGATCCATCGCTCGTACGTGGCCA
CACATTATCTCGTCACGCTGGCAGCTATGCAACAGGTGGCGTCTACGTAT
GCGGGTAACGGGGGGGTGACGCCCGGGGACCTGACAATGTTGGCCGCGAC
GACGGCTTTCTCCGTCCTCTTCTCCGATTTTTTCAGCGGAATTTTCCATT
GGTCGGTGGATAATTATGGGAACGGAAAGACGCCGGTGTTGGGCACAGTG
ATCGAGGCCTTTCAAGGGCACCACGACGCGCCGTGGACGATCACGTACCG
GCAATTCAGCAATAACGTGCACAAGATTACCAAAATCACCATCCCCGCCA
TGCTAGCCATTGTAGCCCTTCACCCGTCTTCTCCTCTCGTCACGTTGTTT
GCAACTCTGTTCTTCAATCTGCAGGTACTCAGCCAGGAATTCCACAAGTT
ATCCCACTTGTCCAAGCCTCCCGCTTGGGCGGTGAGGCTTCAAGACCTGG
GCCTGATTATTTCCAGGAAAGAGCACGGACAACATCACTCCAGCCCATTT
GAAAGCAACTATTGCATCTTGACGGGTACTTGCAATCGTATGTTGGATGA
AAGTGGGTTCTTCCGGTTTTTGGAGAAAGCAGTGTACGATGTGACCGGCG
TGATGCCGAACTGTTGGAAGCAAGGCTCTTCGGAGTTTCGAGCAGAGATG
TTAGTGGGAAGAAGAGGTGGAGCGGACGCGAATATGGTGGACGAGAAGAT
GGAATGAGAGGAGTGACGCGGCAAGTTGCTCGGAAGGGATAAGGAGATAG
CGAAGTCCTGGGAAGCCTGTCCAGCATGTCCTCGACGTTGGGTGAAGGGA
GAACAGAGGCTACTCAAGACATGCGAAACAAGGGAGAAGAATGTGAAGGT
ATCCAAGATGTATATTACCATTTGTGGTGGTGTCTCGGTGTGTTTGTGCC
AAGGAAGCGGACCGGTAGGACGCTGACGCACATAGCCATGCTGACCGCAC
CCCTGCCCCGCAATTGTGGGAGGGGACAGGGCCAAGAAGAGTAACCGGAA
CCAGAACGATCTCAGTGCAAACGACAAGAGTGCAGCGTCTCCGTGTTGTG
CTTGGTTACTGAGTTTTGTCGAGGTACCCTGTCGATCAGTTCGGATACTT
GAAAAACTGATGCGAAATTTTGTTCACTGGAAGGGTGGTTCCCGCACCGG
GGTGACAAAGCGCGACTGCGGTGAGACCTGAAACATTCAGCCGGAAACAT
GAAAGAAAATGT back to topCoding sequence (CDS) from alignment at CM002457.1:298701..300312- >rna1310 ID=rna1310|Name=rna1310|organism=Nannochloropsis gaditana|type=CDS|length=1101bp|location=Sequence derived from alignment at CM002457.1:298701..300312- (Nannochloropsis gaditana)
ATGAAGCCCTACCCGATTGTCACTATTGCGACTCTAGCCATTGGCGCAGT
AGCTGTGCACGGCTTCGTTATCCCAGCCCCATCGTCTCGACGCATCTCGC
ACGATCCTTGGAGCTCCACCAGGTTTCTGCGATATGTCGACGTGTTACAA
TCCACAACACTGCCGTCTGACACACCTGGTATCAGTAGTAATAGCATAGT
AACCAATGGCTTGTACCCGTCCGATCCAGTTGACGACGCAAGCTGTGTAT
CTACAGAAACAAACCTTCCAATCTCCTTGAGGAACGACCGTATCGTTGAG
AAGAAGTCAAAGCGGAGAGGTCCACCGCCACCTGTCATGGTAGCAGACGG
TGACGTCCTGGAAAGTTCTTGGATCCATCGCTCGTACGTGGCCACACATT
ATCTCGTCACGCTGGCAGCTATGCAACAGGTGGCGTCTACGTATGCGGGT
AACGGGGGGGTGACGCCCGGGGACCTGACAATGTTGGCCGCGACGACGGC
TTTCTCCGTCCTCTTCTCCGATTTTTTCAGCGGAATTTTCCATTGGTCGG
TGGATAATTATGGGAACGGAAAGACGCCGGTGTTGGGCACAGTGATCGAG
GCCTTTCAAGGGCACCACGACGCGCCGTGGACGATCACGTACCGGCAATT
CAGCAATAACGTGCACAAGATTACCAAAATCACCATCCCCGCCATGCTAG
CCATTGTAGCCCTTCACCCGTCTTCTCCTCTCGTCACGTTGTTTGCAACT
CTGTTCTTCAATCTGCAGGTACTCAGCCAGGAATTCCACAAGTTATCCCA
CTTGTCCAAGCCTCCCGCTTGGGCGGTGAGGCTTCAAGACCTGGGCCTGA
TTATTTCCAGGAAAGAGCACGGACAACATCACTCCAGCCCATTTGAAAGC
AACTATTGCATCTTGACGGGTACTTGCAATCGTATGTTGGATGAAAGTGG
GTTCTTCCGGTTTTTGGAGAAAGCAGTGTACGATGTGACCGGCGTGATGC
CGAACTGTTGGAAGCAAGGCTCTTCGGAGTTTCGAGCAGAGATGTTAGTG
GGAAGAAGAGGTGGAGCGGACGCGAATATGGTGGACGAGAAGATGGAATG
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