rna1306, rna1306 (mRNA) Nannochloropsis gaditana

Overview
Namerna1306
Unique Namerna1306
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length996
Alignment locationCM002457.1:292947..294354 +

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Properties
Property NameValue
Productredoxin domain protein
Orig transcript idgnl|cribi|Naga_100028g24.3291.mrna
Orig protein idgnl|cribi|Naga_100028g24.3291
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:292947..294354 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100028g24gene1260Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1306rna1306-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29355.1cds1304Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1306 ID=rna1306|Name=rna1306|organism=Nannochloropsis gaditana|type=mRNA|length=996bp
GAAGAGTGCACGTAAAACCAGACTCACAGGGTGTGAAAAGAACGTCGCTT
CCAAATAAGATATGACCACTTATACGCGCGAAGGCTTCCATACAGAGTGT
TCATGAAGGGCCTCGCCATTGATGCAGTCCATAGACTTGCCAATGCTGAT
AGAATAGGACTTTCCACGACAAGCTCCACCACCACTGTGGCGAACACGAC
CACACCGTGCAATCAGACGCTCTTTCTCTTCACCCGTGCCCCCGCGCTTT
TCTCTCGGCTTCATCGCTCACGTCCATTGTGACTGCTACCCCACTGCACA
GAAGAGATTTGCGGGCTTATCGAAGTACGGAAGCGGGTTCAAAGGGAGCA
GTTCTTCCCTTGCGAACGTAGGCATGGCCACCATGAAAGCGCTCAGCGTG
CCAGTTAAGCTGCTAAAAGAAGGAGAGGGTCATGTGGTCACGGCAGAACT
AAAATCCGGGGAGGTCTATCGAGGATTGTTGATGGAATCTGAAGACACAA
TGAACGTCCACCTCTCGGACGTCACACACACCGCACGGAACGGCAAAGTC
CGTAAATTGGAACAAGTGTACTTGAGAGGGAGCCATCTCAAATTCATCGT
GCTACCAGAGATCCTCAAGCACGCTCCTGTGTTCAAGAAGGTGCAGGGCA
TGAAAAAGAAGGAGAGCAGCAAGACGGCGGGCAGAGGCCGCGGGGGAGCT
TTTCGGGGGAAGAAGAGGAAGGCCGGGAACTAATGCACATGTATCGACGT
GATTGACCCCGCCTTCCCTTGTGCGATTGCCCACACGTCGACCAGATGGA
GAAGAAAAGTTATGCGGTCGATCATGAAAGGAGGAGTTCGGCGCCCGCTG
GGGCCTCCCACAATAAGCAGCCGTTCTCGAGACCAATCCTCGTCAATGCC
AGCGCTGCAGACGTGCGTGATAAGGTCCATGGACAGCGACCTACCCGAAA
TACGTTTTCTGTCCCATTTAAAAGAAAAAACAAGATCTGTGTAACA
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protein sequence of rna1306

>rna1306-protein ID=rna1306-protein|Name=rna1306|organism=Nannochloropsis gaditana|type=polypeptide|length=232bp
MVQRHFEGQFPLPHHENLFKYLRIHICGDEILYRDIPWALAGAAVTLEAL
NHYDSDKTMPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKR
RVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMD
AFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFA
MVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL
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mRNA from alignment at CM002457.1:292947..294354+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1306 ID=rna1306|Name=rna1306|organism=Nannochloropsis gaditana|type=mRNA|length=1408bp|location=Sequence derived from alignment at CM002457.1:292947..294354+ (Nannochloropsis gaditana)
GGTACATTGAACGGCCTACCCGTGGACAACGAAACACACAAATTGTACAA
GGAAAAGAGCATCTGTACGGACGTATTACACACCTACACAGACAAGTTAA
GGGTGAATTTCTGTGGCTTGTCAAGGCATTCAATTCGGCGGTCTTGAAGG
TTTTATGGCCCTGTTTGTCGCGGGCGGCGATCACGGTGTGCTATGGTACA
GCGGCATTTTGAAGGAcagtttcctcttccccaccatGAGAATTTATTCA
AATATTTGCGAATACACATATGTGGGGATGAAATTCTCTACAGGGACATC
CCATGGGCGCTGGCTGGAGCAGCAGTTACGCTTGAGGCATTAAACCACTA
CGATTCAGACAAGACAATGCCTTCCCAAGTTGGTGATTTGTTTCCAAATG
TTGACCTCTGGGTTTTGGAGCCTGCACACTCCGACAATAAACCTCGTCAA
CCAGTTTCTGTTCACTCCTGGGAACTTGTTAAAGGCAAACGGCGCGTAAT
TTTCGTGGGCATTCCAGGACCGGTAAGTCGATCGCGAAGTCTGTGGAAGG
CCCACTCCATTACCATCGCGTCGAAATCGAGCGTGCTGCAATCAATTAAC
CAATAAATGATCCAACAGTTCACGCCTGGGTGCTCAAAAAGCCACGTCCC
CGGTTTCATCGAGACAGCCCTCCGCTTGCAAGCCAAGGGCATAGATGACA
TATACGTGATCAGCACCGCGGACGGTACGAACGGAAAGAAATGAATGTGT
CTGGTACGCGTCGAACCTAAGTCTTCCATCATTATTAATGCCAGCTTCCT
TTCATCTCTGCCATGCCAGCATTTGTCATGGACGCCTTTGCCAGAACCTT
GGGGACTGACAAGCAAAGGCAACCTCTCGCGATTACATTTTTGGCGGATG
GGAACCATGCTCTTACGAAAGCATTGGATATGGAGCTGGATGGATCAGCG
CGCGGGATGGGCATGCGAATGCAACGTTTCGCTATGGTAGTGAACGGCGA
TGGTGTCATTGAGGACTTGCTGGTGGATCCCTCGGGCCATATTAAATTTT
CACGGGCGGAAAATGTTTTGAGTCGTCTGTGAATGAACTGAGAGAAACAT
TCGACATGGGAAACAAGCACGCTTCGTTCTGAAGTGTGGCTTCTGCGCTT
TGATCATATTAACGAGTACTGGTTGATTTTACTTTGGTACTGGAACAGAA
GGCTCTTTCGAAAGGCTTGTGCAATATCAATTAAACACGCATAATAAGCA
ACGTGAATGTTAAGGAAGCTATGTCAAACTTGGAAGCAGGTGGCAACCTG
CATATGATGGATTTCTTGTCGCGTTTTCTGACTCTTCGTTCTGCGCGAAA
GTGCAAACGCGTAGTCTACATATCAAAAATGCCGGCAGCGTACATCCCTT
AATGACTC
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Coding sequence (CDS) from alignment at CM002457.1:292947..294354+

>rna1306 ID=rna1306|Name=rna1306|organism=Nannochloropsis gaditana|type=CDS|length=2097bp|location=Sequence derived from alignment at CM002457.1:292947..294354+ (Nannochloropsis gaditana)
ATGGTACAGCGGCATTTTGAAGGAcagtttcctcttccccaccatGAGAA
TTTATTCAAATATTTGCGAATACACATATGTGGGGATGAAATTCTCTACA
GGGACATCCCATGGGCGCTGGCTGGAGCAGCAGTTACGCTTGAGGCATTA
AACCACTACGATTCAGACAAGACAATGCCTTCCCAAGTTGGTGATTTGTT
TCCAAATGTTGACCTCTGGGTTTTGGAGCCTGCACACTCCGACAATAAAC
CTCGTCAACCAGTTTCTGTTCACTCCTGGGAACTTGTTAAAGGCAAACGG
CGCGTAATTTTCGTGGGCATTCCAGGACCGTTCACGCCTGGGTGCTCAAA
AAGCCACGTCCCCGGTTTCATCGAGACAGCCCTCCGCTTGCAAGCCAAGG
GCATAGATGACATATACGTGATCAGCACCGCGGACGCATTTGTCATGGAC
GCCTTTGCCAGAACCTTGGGGACTGACAAGCAAAGGCAACCTCTCGCGAT
TACATTTTTGGCGGATGGGAACCATGCTCTTACGAAAGCATTGGATATGG
AGCTGGATGGATCAGCGCGCGGGATGGGCATGCGAATGCAACGTTTCGCT
ATGGTAGTGAACGGCGATGGTGTCATTGAGGACTTGCTGGTGGATCCCTC
GGGCCATATTAAATTTTCACGGGCGGAAAATGTTTTGAGTCGTCTGTGAA
TGGTACAGCGGCATTTTGAAGGAcagtttcctcttccccaccatGAGAAT
TTATTCAAATATTTGCGAATACACATATGTGGGGATGAAATTCTCTACAG
GGACATCCCATGGGCGCTGGCTGGAGCAGCAGTTACGCTTGAGGCATTAA
ACCACTACGATTCAGACAAGACAATGCCTTCCCAAGTTGGTGATTTGTTT
CCAAATGTTGACCTCTGGGTTTTGGAGCCTGCACACTCCGACAATAAACC
TCGTCAACCAGTTTCTGTTCACTCCTGGGAACTTGTTAAAGGCAAACGGC
GCGTAATTTTCGTGGGCATTCCAGGACCGTTCACGCCTGGGTGCTCAAAA
AGCCACGTCCCCGGTTTCATCGAGACAGCCCTCCGCTTGCAAGCCAAGGG
CATAGATGACATATACGTGATCAGCACCGCGGACGCATTTGTCATGGACG
CCTTTGCCAGAACCTTGGGGACTGACAAGCAAAGGCAACCTCTCGCGATT
ACATTTTTGGCGGATGGGAACCATGCTCTTACGAAAGCATTGGATATGGA
GCTGGATGGATCAGCGCGCGGGATGGGCATGCGAATGCAACGTTTCGCTA
TGGTAGTGAACGGCGATGGTGTCATTGAGGACTTGCTGGTGGATCCCTCG
GGCCATATTAAATTTTCACGGGCGGAAAATGTTTTGAGTCGTCTGTGAAT
GGTACAGCGGCATTTTGAAGGAcagtttcctcttccccaccatGAGAATT
TATTCAAATATTTGCGAATACACATATGTGGGGATGAAATTCTCTACAGG
GACATCCCATGGGCGCTGGCTGGAGCAGCAGTTACGCTTGAGGCATTAAA
CCACTACGATTCAGACAAGACAATGCCTTCCCAAGTTGGTGATTTGTTTC
CAAATGTTGACCTCTGGGTTTTGGAGCCTGCACACTCCGACAATAAACCT
CGTCAACCAGTTTCTGTTCACTCCTGGGAACTTGTTAAAGGCAAACGGCG
CGTAATTTTCGTGGGCATTCCAGGACCGTTCACGCCTGGGTGCTCAAAAA
GCCACGTCCCCGGTTTCATCGAGACAGCCCTCCGCTTGCAAGCCAAGGGC
ATAGATGACATATACGTGATCAGCACCGCGGACGCATTTGTCATGGACGC
CTTTGCCAGAACCTTGGGGACTGACAAGCAAAGGCAACCTCTCGCGATTA
CATTTTTGGCGGATGGGAACCATGCTCTTACGAAAGCATTGGATATGGAG
CTGGATGGATCAGCGCGCGGGATGGGCATGCGAATGCAACGTTTCGCTAT
GGTAGTGAACGGCGATGGTGTCATTGAGGACTTGCTGGTGGATCCCTCGG
GCCATATTAAATTTTCACGGGCGGAAAATGTTTTGAGTCGTCTGTGA
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Synonyms
Publications