EWM29355.1, cds1304 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|585111883|gb|EWM29355.1| (redoxin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 481.485 bits (1238), Expect = 5.111e-172 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
Query: 1 MVQRHFEGQFPLPHHENLFKYLRIHICGDEILYRDIPWALAGAAVTLEALNHYDSDKTMPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
MVQRHFEGQFPLPHHENLFKYLRIHICGDEILYRDIPWALAGAAVTLEALNHYDSDKTMPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL
Sbjct: 1 MVQRHFEGQFPLPHHENLFKYLRIHICGDEILYRDIPWALAGAAVTLEALNHYDSDKTMPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|553185318|ref|XP_005854233.1| (redoxin domain protein [Nannochloropsis gaditana CCMP526] >gi|422294824|gb|EKU22124.1| redoxin domain protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 353.984 bits (907), Expect = 1.669e-122 Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0
Query: 59 MPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
MPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSV SW+LVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL
Sbjct: 1 MPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSVRSWQLVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 174
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|1082697953|gb|OGA20086.1| (peroxiredoxin [Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_63_19] >gi|1082731546|gb|OGA50781.1| peroxiredoxin [Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13]) HSP 1 Score: 136.732 bits (343), Expect = 5.508e-37 Identity = 75/175 (42.86%), Postives = 106/175 (60.57%), Query Frame = 0
Query: 59 MPSQVGDLFPNVDLW-VLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
M + GD P+ L E + P P V + KGK+ VIF G+PG +TP CS HVPGF+ +L+AKG+D+++ I+ DAFVM A+ R +Q+ + L DG+ TK L +ELD +ARG+GMRMQRFAM+V DGV++D+ V+ +G + S AE VL +L
Sbjct: 1 MTIKAGDKLPDGKLTETTEFDTAAGCPMNPQEVDVIQATKGKKVVIF-GVPGAYTPTCSAKHVPGFVSNHDKLKAKGVDEVWCIAVNDAFVMGAWGR-----EQKAAGKVRMLGDGSAEYTKKLGLELDLTARGLGMRMQRFAMIVQ-DGVVKDVAVEAAGKFEVSAAEAVLGKL 168
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|654921185|ref|WP_028371747.1| (peroxiredoxin [Burkholderia sp. UYPR1.413]) HSP 1 Score: 136.346 bits (342), Expect = 7.274e-37 Identity = 77/171 (45.03%), Postives = 104/171 (60.82%), Query Frame = 0
Query: 62 QVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
Q G+ P ++ L + P S E GKR VIF G+PG FTP CS HVPG++E A +L+A GID+I+ +S DAFVM A+AR QR + +ADG+ A TKAL +E D SARGMG+R QR+AMVV+ DGV++ L V+ G + S A ++L+ L
Sbjct: 3 QTGEKLPQATVYELIEDEREGCTIGPNSFDVREQTAGKRVVIF-GLPGAFTPTCSAKHVPGYVEQAEKLRAAGIDEIWCVSVNDAFVMGAWAR-----DQRTSGKVRMMADGSAAFTKALGLEQDLSARGMGIRSQRYAMVVD-DGVVKTLHVEAPGKFEVSDAASILATL 166
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|1197215672|ref|WP_086466305.1| (peroxiredoxin [Oceanibaculum sp. L54-1-50]) HSP 1 Score: 135.961 bits (341), Expect = 9.170e-37 Identity = 80/174 (45.98%), Postives = 109/174 (62.64%), Query Frame = 0
Query: 59 MPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
M +VGD P+V L V + A N+ V + + KGK+ V+F +PG FTP CS HVPGF+E A L+ KG+D I +S DAFVMDA+A+ +D + I LADG+ A TKA+ +ELD ARGMG+R QR+AMVV+ DG + L V+ G + S AEN+L++L
Sbjct: 1 MTIKVGDKIPSVTLQV-KTADGINE------VSTDDFFKGKKVVLF-ALPGAFTPTCSAKHVPGFVEKAAELKGKGVDTIACLSVNDAFVMDAWAKDQKSDGK-----IVMLADGSAAFTKAVGLELDLVARGMGVRSQRYAMVVD-DGKVSRLEVEEPGAFQVSSAENILAKL 160
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|1095312760|emb|SEJ70619.1| (Peroxiredoxin [Paraburkholderia diazotrophica]) HSP 1 Score: 135.961 bits (341), Expect = 1.039e-36 Identity = 77/171 (45.03%), Postives = 105/171 (61.40%), Query Frame = 0
Query: 62 QVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
QVG+ P ++ L + P S E GKR VIF G+PG FTP CS HVPG++E A +L+A GID+I+ +S DAFVM A+AR QR + +ADG+ A T+AL +E D SARGMG+R QR+AMVV+ DGV++ L V+ G + S A ++L+ L
Sbjct: 3 QVGEKLPQATVYELIEDEREGCTIGPNSFDVREQTAGKRVVIF-GLPGAFTPTCSAKHVPGYVEQAEKLRAVGIDEIWCVSVNDAFVMGAWAR-----DQRTSGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVD-DGVVKTLHVEAPGKFEVSDATSILATL 166
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|1204999227|ref|WP_087735229.1| (peroxiredoxin [Paraburkholderia piptadeniae] >gi|1132095707|emb|SIT42167.1| putative Peroxiredoxin [Paraburkholderia piptadeniae]) HSP 1 Score: 135.576 bits (340), Expect = 1.636e-36 Identity = 75/171 (43.86%), Postives = 105/171 (61.40%), Query Frame = 0
Query: 62 QVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
Q+G+ P ++ L + P S E GKR VIF G+PG FTP CS HVPG++E A + +A GID+I+ +S DAFVM A+AR +QR + +ADG+ A T+AL +E D SARGMG+R QR+AMVV+ DGV++ L V+ G + S A ++L+ L
Sbjct: 3 QIGEKLPQATVYELIGDGREGCTIGPNSFDVREQTAGKRVVIF-GLPGAFTPTCSAKHVPGYVEQAEKFRAAGIDEIWCVSVNDAFVMGAWAR-----EQRTSGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVD-DGVVKTLYVEAPGKFEVSDAASILATL 166
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|653236605|ref|WP_027442326.1| (peroxiredoxin [Porphyrobacter cryptus]) HSP 1 Score: 134.42 bits (337), Expect = 3.554e-36 Identity = 78/174 (44.83%), Postives = 100/174 (57.47%), Query Frame = 0
Query: 59 MPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
M VGD P+V L P P V + E GKR +F +PG FTP CS H+PGF+E A L+AKG+D+I + DAFVM+A+ + G+D IT LADGN +AL + +D S GMG R QRF+MVVN DGV+E L V+ G K S AE +LS+L
Sbjct: 1 MTIAVGDKLPDVTLI-------KATPEGPQPVKTSEYFAGKRVALF-SVPGAFTPTCSAKHLPGFVEKAAELKAKGVDEIVGTAVNDAFVMNAWNKAAGSDD------ITMLADGNGEFAEALGLTMDASGYGMGKRGQRFSMVVN-DGVVEQLNVEAPGDFKVSSAEYMLSQL 159
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|1197797251|ref|WP_086735700.1| (peroxiredoxin [Porphyrobacter colymbi]) HSP 1 Score: 133.65 bits (335), Expect = 5.781e-36 Identity = 78/174 (44.83%), Postives = 101/174 (58.05%), Query Frame = 0
Query: 59 MPSQVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
M VGD P V L P P +V S E GKR +F +PG FTP CS H+PGF+E A L+AKG+D+I + DAFVM A+ + G+D AIT LADGN KA+ + +DGS GMG R QRF+MV+N DGV+E L V+ G + S AE++L +L
Sbjct: 1 MTISVGDKIPEVTLV-------KATPEGPQAVKSSEYFAGKRVALF-SVPGAFTPTCSAKHLPGFVEKAEDLKAKGVDEIVGTAVNDAFVMGAWNKAQGSD------AITMLADGNADFVKAVGLTMDGSGFGMGTRGQRFSMVIN-DGVVEQLNVEEPGDFRVSSAEHMLGQL 159
BLAST of EWM29355.1 vs. NCBI_GenBank
Match: gi|983436962|ref|WP_060599653.1| (peroxiredoxin [Paraburkholderia caribensis] >gi|954636769|gb|ALP61913.1| peroxiredoxin [Paraburkholderia caribensis] >gi|1015462002|gb|AMV43779.1| peroxiredoxin [Paraburkholderia caribensis]) HSP 1 Score: 134.035 bits (336), Expect = 6.454e-36 Identity = 76/171 (44.44%), Postives = 105/171 (61.40%), Query Frame = 0
Query: 62 QVGDLFPNVDLWVLEPAHSDNKPRQPVSVHSWELVKGKRRVIFVGIPGPFTPGCSKSHVPGFIETALRLQAKGIDDIYVISTADAFVMDAFARTLGTDKQRQPLAITFLADGNHALTKALDMELDGSARGMGMRMQRFAMVVNGDGVIEDLLVDPSGHIKFSRAENVLSRL 232
QVG+ P ++ L + P S E GKR VIF G+PG FTP CS HVPG++E A +L+A GID+I+ +S DAFVM A+AR T + + +ADG+ A T+AL +E D SARGMG+R QR+AMVV+ DGV++ L V+ G + S A ++L+ L
Sbjct: 3 QVGEKLPQATVYELIEDEREGCTIGPNSFDVREQTAGKRVVIF-GLPGAFTPTCSAKHVPGYVEQAEKLRAAGIDEIWCVSVNDAFVMGAWARDQHTSGK-----VRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVD-DGVVKTLHVEAPGKFEVSDAASILATL 166 The following BLAST results are available for this feature:
BLAST of EWM29355.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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