|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100028g20.3307.mrna |
| Orig protein id | gnl|cribi|Naga_100028g20.3307 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:285551..287209 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1303 ID=rna1303|Name=rna1303|organism=Nannochloropsis gaditana|type=mRNA|length=921bp
ATGACCGCAACAGTGACTGGCGGAAAGACTCGGGAGGAGAACGAGCAAGG
TCAAGGGCAGGAGGAGCTGAAGCTACAACAGGGGGGAAGGAAACTACGGG
AGCATGAAGGCCGGGCGTTGACACCGGAGCAAGTAAAAGACCTCTGTTTT
TCTTTAACCAAGCATCCGCGTGTAAAGGCCTTTCCTGTTTCCAACGCCCC
CGAAGATGTTCCTGCCGGCATGCAAATCAAGACTGTTTATTTTGTTCGAC
ACGCCGAAGCATTGCACAACGAGGCATTTAAAATACGTGGCCGGGCAGCC
TATGCAGATCCAAGCTTTCTCGACCCTAAATTGACGAAATTAGGAGTATC
GCAGTGCCTGGCACTCAAGCCATCCGTGGAAGCCATACAGTCTTCCATCG
ACTTGGTGGTTGTCTCCCCGCTGCGCCGTGCTCTCATGACAGCCGCTCTG
GCGTTCGATCACAGAAGGGAGGTCTCATGGATCGCGCTTGAAACCGTGCG
GGAGCGGATTGGGAAGAATACCTGCGATAAACGGCGAAGACGAGGAGTGC
TTGAAGCCGAATACCCGGATGTAGATTTTGAGAACATAGGAGAGGAAGAC
ACACGGTGGACTGAGCATCACAGAGAGACGCCTGCAGAGATGGCAGAACG
GGGATTGGAGTTCTTGGCGTGGCTTCGAGGGCGTCCGGAAGATCGGATCG
GGGTCGTCACTCATTCCGCCTTCCTTTCCACCCTGTTCGCCGAGGTCTTC
GAGTGCGCGGACCCAGCCATGTCCCGCTGGGGTGGGACGGATCGGGGAGA
GCGGTTTTGGAGGACAGAACAGAAGTCTGCGTATATTTCCTTGACCAAAT
GGTGTGAAAATCGAAGACATAGTAAATACCACATGATACGGCTCTTCTTG
TTCCCCATTTGTAAAAATTAG back to topprotein sequence of rna1303 >rna1303-protein ID=rna1303-protein|Name=rna1303|organism=Nannochloropsis gaditana|type=polypeptide|length=484bp
MARHGYEYENPREARAREKEMRRQMTQMGMVPPPPTSEALGGKGKRETEG
DAYEEYYSSEEREQVGWEVVRQMEKEEEKRCEHGLVKAQGTHRNDPYADY
AQLKAAGNVEDTEAIIREARRVNREGLVGYGLGEDAVGRETASKFNVPSA
GMGQEWSAFEAAAAQGIQDMGRYQDIGGGASSQKGSGSTLEAEEEMGIEE
FMARLGYEYADPRVAKSQGEVESRPVDDPTSSSTESSFQSLAAPSTSVGN
AFPRPQTIAPPAASPDASPSPFNTIQPLPPRADQSPPPWAHEIEALYDRV
RANQAAARRRQGLPPLPGDADVMLPFIHPPGDQPLDPQGRPRQLTTEEVL
SKLEMVRVNPDGSFTKVEAGQGVPTVTKLKPSRGGQQGRDTFSLRMAGDP
AKEAKEKVDEDLVSRLARWSTEWATGGRDVAVYSGSKLGTSRRHSYHSVS
NISDGGSDCCRNHQHPDSMGRHTREGLTWGSEDM back to topmRNA from alignment at CM002457.1:285551..287209- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1303 ID=rna1303|Name=rna1303|organism=Nannochloropsis gaditana|type=mRNA|length=1659bp|location=Sequence derived from alignment at CM002457.1:285551..287209- (Nannochloropsis gaditana)
ATGGCGCGTCATGGCTACGAATATGAAAATCCGCGGGAAGCGAGAGCGAG
AGAGAAAGAGATGCGACGCCAGATGACTCAAATGGGCATGGTCCCTCCCC
CCCCAACATCAGAAGCACTCGGTGGGAAAGGGAAAAGGGAGACAGAAGGG
GACGCGTACGAGGAATACTACAGCTCCGAGGAGCGGGAACAGGTGGGATG
GGAGGTGGTGCGGCAGATGGAGAAGGAGGAGGAGAAGCGATGCGAGCACG
GTCTCGTGAAAGCACAGGGTACCCACCGTAACGACCCGTACGCGGACTAT
GCTCAGTTGAAGGCGGCGGGCAACGTAGAGGACACGGAGGCGATCATTCG
GGAGGCGCGGCGGGTGAATCGGGAGGGTCTGGTGGGGTACGGCCTGGGGG
AGGACGCGGTGGGGAGGGAGACGGCGAGTAAGTTCAACGTGCCGAGTGCG
GGCATGGGCCAGGAATGGTCGGCGTTTGAGGCGGCGGCGGCGCAAGGGAT
CCAGGATATGGGCCGCTATCAAGACATTGGGGGTGGAGCTTCCTCTCAAA
AAGGCAGCGGGAGCACCCTGGAGGCGGAGGAGGAAATGGGCATCGAGGAG
TTCATGGCTCGCCTGGGGTACGAGTATGCGGACCCTCGGGTGGCTAAATC
GCAGGGCGAGGTCGAGTCGCGCCCCGTCGATGACCCTACGTCTTCTTCCA
CCGAGTCCAGCTTTCAATCGCTCGCGGCCCCCTCCACATCTGTTGGCAAC
GCGTTCCCCCGACCTCAGACAATCGCACCCCCTGCGGCCTCGCCCGACGC
CTCGCCAAGTCCATTCAACACCATCCAGCCTTTACCACCGCGGGCGGACC
AATCGCCCCCACCTTGGGCGCATGAAATCGAGGCTCTCTACGACCGTGTG
CGTGCCAATCAAGCGGCGGCCCGGCGTCGGCAAGGCCTACCTCCCCTGCC
CGGCGATGCGGATGTGATGCTTCCTTTCATACACCCTCCAGGAGACCAGC
CCCTCGACCCGCAGGGACGCCCTCGGCAGTTGACAACCGAAGAGGTGCTG
AGCAAGTTGGAGATGGTGCGTGTGAATCCGGACGGGTCTTTCACCAAAGT
GGAAGCCGGTCAAGGTTTGCCTGCGCCCTGGGAGCCGCCCACGGCCTCGG
CAGTCGTCGGGGGGGGGGGCTTTGAGACCTTGCCCCGCCCCGTGGGCGGG
GGTGGGAGCGGAAGTACCAGCGCAAGCAATAGTCCGGGCGGGGGTGCCAA
ATGACTCGCATTGGCCGAAGGCGTGCCAACTGTCACCAAGCTTAAACCGT
CGAGAGGTGGGCAGCAGGGAAGGGATACGTTCTCCCTACGGATGGCAGGG
GATCCGGCGAAGGAAGCGAAAGAGAAAGTAGACGAGGACCTGGTATCACG
TTTGGCACGTTGGAGCACAGAGTGGGCAAGTCACTTCTGGGGATGAAAGG
AGGGATCGTGGGGGAGATAGGAGCAAGCGGGGGGGAGGGACGTTGCTGTG
TATAGCGGCAGCAAGTTAGGAACATCGCGCAGGCACAGTTACCATAGCGT
TTCAAACATTAGCGACGGCGGCAGTGACTGTTGCCGAAATCATCAGCACC
CTGACAGCATGGGCCGTCATACGAGAGAGGGACTGACGTGGGGCTCTGAG
GACATGTAA back to topCoding sequence (CDS) from alignment at CM002457.1:285551..287209- >rna1303 ID=rna1303|Name=rna1303|organism=Nannochloropsis gaditana|type=CDS|length=4365bp|location=Sequence derived from alignment at CM002457.1:285551..287209- (Nannochloropsis gaditana)
CGGGGGGGAGGGACGTTGCTGTGTATAGCGGCAGCAAGTTAGGAACATCG
CGCAGGCACAGTTACCATAGCGTTTCAAACATTAGCGACGGCGGCAGTGA
CTGTTGCCGAAATCATCAGCACCCTGACAGCATGGGCCGTCATACGAGAG
AGGGACTGACGTGGGGCTCTGAGGACATGTAAGCGTGCCAACTGTCACCA
AGCTTAAACCGTCGAGAGGTGGGCAGCAGGGAAGGGATACGTTCTCCCTA
CGGATGGCAGGGGATCCGGCGAAGGAAGCGAAAGAGAAAGTAGACGAGGA
CCTGGTATCACGTTTGGCACGTTGGAGCACAGAGTGGGCAAATGGCGCGT
CATGGCTACGAATATGAAAATCCGCGGGAAGCGAGAGCGAGAGAGAAAGA
GATGCGACGCCAGATGACTCAAATGGGCATGGTCCCTCCCCCCCCAACAT
CAGAAGCACTCGGTGGGAAAGGGAAAAGGGAGACAGAAGGGGACGCGTAC
GAGGAATACTACAGCTCCGAGGAGCGGGAACAGGTGGGATGGGAGGTGGT
GCGGCAGATGGAGAAGGAGGAGGAGAAGCGATGCGAGCACGGTCTCGTGA
AAGCACAGGGTACCCACCGTAACGACCCGTACGCGGACTATGCTCAGTTG
AAGGCGGCGGGCAACGTAGAGGACACGGAGGCGATCATTCGGGAGGCGCG
GCGGGTGAATCGGGAGGGTCTGGTGGGGTACGGCCTGGGGGAGGACGCGG
TGGGGAGGGAGACGGCGAGTAAGTTCAACGTGCCGAGTGCGGGCATGGGC
CAGGAATGGTCGGCGTTTGAGGCGGCGGCGGCGCAAGGGATCCAGGATAT
GGGCCGCTATCAAGACATTGGGGGTGGAGCTTCCTCTCAAAAAGGCAGCG
GGAGCACCCTGGAGGCGGAGGAGGAAATGGGCATCGAGGAGTTCATGGCT
CGCCTGGGGTACGAGTATGCGGACCCTCGGGTGGCTAAATCGCAGGGCGA
GGTCGAGTCGCGCCCCGTCGATGACCCTACGTCTTCTTCCACCGAGTCCA
GCTTTCAATCGCTCGCGGCCCCCTCCACATCTGTTGGCAACGCGTTCCCC
CGACCTCAGACAATCGCACCCCCTGCGGCCTCGCCCGACGCCTCGCCAAG
TCCATTCAACACCATCCAGCCTTTACCACCGCGGGCGGACCAATCGCCCC
CACCTTGGGCGCATGAAATCGAGGCTCTCTACGACCGTGTGCGTGCCAAT
CAAGCGGCGGCCCGGCGTCGGCAAGGCCTACCTCCCCTGCCCGGCGATGC
GGATGTGATGCTTCCTTTCATACACCCTCCAGGAGACCAGCCCCTCGACC
CGCAGGGACGCCCTCGGCAGTTGACAACCGAAGAGGTGCTGAGCAAGTTG
GAGATGGTGCGTGTGAATCCGGACGGGTCTTTCACCAAAGTGGAAGCCGG
TCAAGCGGGGGGGAGGGACGTTGCTGTGTATAGCGGCAGCAAGTTAGGAA
CATCGCGCAGGCACAGTTACCATAGCGTTTCAAACATTAGCGACGGCGGC
AGTGACTGTTGCCGAAATCATCAGCACCCTGACAGCATGGGCCGTCATAC
GAGAGAGGGACTGACGTGGGGCTCTGAGGACATGTAAGCGTGCCAACTGT
CACCAAGCTTAAACCGTCGAGAGGTGGGCAGCAGGGAAGGGATACGTTCT
CCCTACGGATGGCAGGGGATCCGGCGAAGGAAGCGAAAGAGAAAGTAGAC
GAGGACCTGGTATCACGTTTGGCACGTTGGAGCACAGAGTGGGCAAATGG
CGCGTCATGGCTACGAATATGAAAATCCGCGGGAAGCGAGAGCGAGAGAG
AAAGAGATGCGACGCCAGATGACTCAAATGGGCATGGTCCCTCCCCCCCC
AACATCAGAAGCACTCGGTGGGAAAGGGAAAAGGGAGACAGAAGGGGACG
CGTACGAGGAATACTACAGCTCCGAGGAGCGGGAACAGGTGGGATGGGAG
GTGGTGCGGCAGATGGAGAAGGAGGAGGAGAAGCGATGCGAGCACGGTCT
CGTGAAAGCACAGGGTACCCACCGTAACGACCCGTACGCGGACTATGCTC
AGTTGAAGGCGGCGGGCAACGTAGAGGACACGGAGGCGATCATTCGGGAG
GCGCGGCGGGTGAATCGGGAGGGTCTGGTGGGGTACGGCCTGGGGGAGGA
CGCGGTGGGGAGGGAGACGGCGAGTAAGTTCAACGTGCCGAGTGCGGGCA
TGGGCCAGGAATGGTCGGCGTTTGAGGCGGCGGCGGCGCAAGGGATCCAG
GATATGGGCCGCTATCAAGACATTGGGGGTGGAGCTTCCTCTCAAAAAGG
CAGCGGGAGCACCCTGGAGGCGGAGGAGGAAATGGGCATCGAGGAGTTCA
TGGCTCGCCTGGGGTACGAGTATGCGGACCCTCGGGTGGCTAAATCGCAG
GGCGAGGTCGAGTCGCGCCCCGTCGATGACCCTACGTCTTCTTCCACCGA
GTCCAGCTTTCAATCGCTCGCGGCCCCCTCCACATCTGTTGGCAACGCGT
TCCCCCGACCTCAGACAATCGCACCCCCTGCGGCCTCGCCCGACGCCTCG
CCAAGTCCATTCAACACCATCCAGCCTTTACCACCGCGGGCGGACCAATC
GCCCCCACCTTGGGCGCATGAAATCGAGGCTCTCTACGACCGTGTGCGTG
CCAATCAAGCGGCGGCCCGGCGTCGGCAAGGCCTACCTCCCCTGCCCGGC
GATGCGGATGTGATGCTTCCTTTCATACACCCTCCAGGAGACCAGCCCCT
CGACCCGCAGGGACGCCCTCGGCAGTTGACAACCGAAGAGGTGCTGAGCA
AGTTGGAGATGGTGCGTGTGAATCCGGACGGGTCTTTCACCAAAGTGGAA
GCCGGTCAAGCGGGGGGGAGGGACGTTGCTGTGTATAGCGGCAGCAAGTT
AGGAACATCGCGCAGGCACAGTTACCATAGCGTTTCAAACATTAGCGACG
GCGGCAGTGACTGTTGCCGAAATCATCAGCACCCTGACAGCATGGGCCGT
CATACGAGAGAGGGACTGACGTGGGGCTCTGAGGACATGTAAGCGTGCCA
ACTGTCACCAAGCTTAAACCGTCGAGAGGTGGGCAGCAGGGAAGGGATAC
GTTCTCCCTACGGATGGCAGGGGATCCGGCGAAGGAAGCGAAAGAGAAAG
TAGACGAGGACCTGGTATCACGTTTGGCACGTTGGAGCACAGAGTGGGCA
AATGGCGCGTCATGGCTACGAATATGAAAATCCGCGGGAAGCGAGAGCGA
GAGAGAAAGAGATGCGACGCCAGATGACTCAAATGGGCATGGTCCCTCCC
CCCCCAACATCAGAAGCACTCGGTGGGAAAGGGAAAAGGGAGACAGAAGG
GGACGCGTACGAGGAATACTACAGCTCCGAGGAGCGGGAACAGGTGGGAT
GGGAGGTGGTGCGGCAGATGGAGAAGGAGGAGGAGAAGCGATGCGAGCAC
GGTCTCGTGAAAGCACAGGGTACCCACCGTAACGACCCGTACGCGGACTA
TGCTCAGTTGAAGGCGGCGGGCAACGTAGAGGACACGGAGGCGATCATTC
GGGAGGCGCGGCGGGTGAATCGGGAGGGTCTGGTGGGGTACGGCCTGGGG
GAGGACGCGGTGGGGAGGGAGACGGCGAGTAAGTTCAACGTGCCGAGTGC
GGGCATGGGCCAGGAATGGTCGGCGTTTGAGGCGGCGGCGGCGCAAGGGA
TCCAGGATATGGGCCGCTATCAAGACATTGGGGGTGGAGCTTCCTCTCAA
AAAGGCAGCGGGAGCACCCTGGAGGCGGAGGAGGAAATGGGCATCGAGGA
GTTCATGGCTCGCCTGGGGTACGAGTATGCGGACCCTCGGGTGGCTAAAT
CGCAGGGCGAGGTCGAGTCGCGCCCCGTCGATGACCCTACGTCTTCTTCC
ACCGAGTCCAGCTTTCAATCGCTCGCGGCCCCCTCCACATCTGTTGGCAA
CGCGTTCCCCCGACCTCAGACAATCGCACCCCCTGCGGCCTCGCCCGACG
CCTCGCCAAGTCCATTCAACACCATCCAGCCTTTACCACCGCGGGCGGAC
CAATCGCCCCCACCTTGGGCGCATGAAATCGAGGCTCTCTACGACCGTGT
GCGTGCCAATCAAGCGGCGGCCCGGCGTCGGCAAGGCCTACCTCCCCTGC
CCGGCGATGCGGATGTGATGCTTCCTTTCATACACCCTCCAGGAGACCAG
CCCCTCGACCCGCAGGGACGCCCTCGGCAGTTGACAACCGAAGAGGTGCT
GAGCAAGTTGGAGATGGTGCGTGTGAATCCGGACGGGTCTTTCACCAAAG
TGGAAGCCGGTCAAG back to top
|