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Properties
| Property Name | Value |
|---|
| Product | DnaJ subfamily C member 28 |
| Orig transcript id | gnl|cribi|Naga_100028g14.3280.mrna |
| Orig protein id | gnl|cribi|Naga_100028g14.3280 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:277513..279561 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1300 ID=rna1300|Name=rna1300|organism=Nannochloropsis gaditana|type=mRNA|length=1753bp
CTTGACAGGCCGTGCACAAGTGAAGCCGTCGACCTCACATCTCCCGCGTC
CCGCCTACAACTATTTGCACTTACTTCAGGCAGAGAAGATATGGGCAAGA
AGAGTAAGTAGGAAGTTTGAAGGGATGGTGTCCTCCAATTAGTGACAACT
TTCTTATTTTGCGAATCTGCAGGTGCGCGTGCACTGGCGGCGGCCCAAAG
ACGTGCCGGCAGGGGAGGTGGACTGACGAGCGATGATGAAAGGGAAAGCG
TGGCTTCAGACATGTCTTTCCTTTCACAAGAAACCTTCGAGGCTTCCACA
CCAGCTGGTGTCGAAGAAACAACGGCGCCAGGAGCTGGTGCAGCTGCGTC
AAGTAGGAACAACGGTGATTTTGCTGACTTGCTTGAAAAGCTGAATGAGA
AGAGGACGACGGCTCGAGAGGATTGTTTGCGGGAGCTTATAGCGGGTCTT
CGATCGTACACATTCGTGGACCAGGCCATTGCCAACCGTGAGTCGGTATT
CTCGAGCCTAGTGGGACTGCTCCGGCGTTCCCGAGAAACGGAGGGGGTGT
TGTGTGCAGAGGCCTTGGGCATGATGATGCTGTTAATAGGGCCCGAGGAG
GACGAAATATTCAATCTTGTCCGAGCTCCTTTGGAATTTGTGATAACCCG
CGGTCAGTCGGAAAGGATGCGGATCGAAGCCACCCGCGCCCTGGCCCTGG
GGTCGTTCATATGCAACACGGAGGAGGAGAGGACACTGGCGCACTTGGCC
TTCTTTGAAGCCCTCTTCACCGGGGAGAGCGAGGGAGGGCGGGCGTCGGA
GGAGCTAAAAGCGGCGGGTGTAGATGCCTGGTCCTTGCTTTTTACGGTGG
CGCCGAGAGGCTACAATACCCACGAATCTAGAGCCCTCCTACTGGAAAAC
TTCCTCCATCTCTTGGATGCGTCCTCGGCGGACCTGCGGGTTGCCGCGGG
CGAGGCGATTGCCTTGCTTCGCGAACATTGGCGGCAGGAAGGGCTGGCCG
TGCACGACGTCTCGGCGGACGAAGAGGAGGTGGTGGACAGCATTGTGGAC
CGGCTCCAGGACATGGCGCGGGAAGGGAGCAAGCGCATGAGTCGGAAGGA
CAAAAAGGCCCAACGTGCCTCTTTTCGCGAGATCTGCTCGGCAGTGGTCG
ACGGCCAACGTCCCGAGGAAGTGATTAGCTACCGCACTCGGAGTTTTCGT
TTGACTTCGTGGGTGAAGATGAAGCAAGTGGAGGCCCTCCGGGACTGCCT
GCAGGGGGGCTTCTTAACGGCCTTGGCCCAAAATACCGTCATCCACGACA
TTTTTGACCTCGACCCCACAGCCTTCGACGTGCCCGTGGAACGGAGCGTG
GTGGCTAAGAACAGCGAGCTGGGTCGGTGGCGGACCACCACACGGTCCAG
AAATCGTCGGTCCCGGGAGAAGGCCAAGCACCACTTTACCGAGGAAGGGG
AGGACGCGTGAGACTGGCTTGACACGAGCGGGTGGCCAGCGGAAGATCCT
GATAGGTCAACATCCCCTGCGTATGTGACGATGTAAACGGGACATGAACC
TATCAGAAGCCACGGTATCTTGGATCGGAGTGCCTGTGACGGTTCTGGGC
GTGGTCTGGGGCCGGTGTGTGGGACAGAGAAGATGGGGCCGCGAGGGCAG
GCATCGAAGCAAAATCATAATCCAAATGGCGGTGGGCTACGGGAAACAAG
GGGGGGGTTTGAATGATGGTAATGGTAGGAGGCCAGTTGTCAAAGAAATA
ACT back to topprotein sequence of rna1300 >rna1300-protein ID=rna1300-protein|Name=rna1300|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MCLSKELIVCSRICSSTMRIRISPLGEQNLVARYITARHLTDAATHQPAA
LPSTQEKKGRNGDQNSSRRKRSRQTHASGVSGRQFLTHPGVPAGTMFARE
EMAMKKRMMETKEGVQKHLAKRLGSADDVLEEQGEDAQNRIERGRRTGVA
SLVEERIQLSMIRGEFANLKRRGKLERERTPGLDRTTDIFMDVLKRNGVL
PEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPT
YEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAE
AALQRPSSYQEARQLYRCADREGLLGVTALMEHRLDYFSDDGSMYQGGGG
SNITTYWQDQNGLGRGKSGRKRRDEASQHISDLMMIPIDSLSRALARLFS
I back to topmRNA from alignment at CM002457.1:277513..279561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1300 ID=rna1300|Name=rna1300|organism=Nannochloropsis gaditana|type=mRNA|length=2049bp|location=Sequence derived from alignment at CM002457.1:277513..279561- (Nannochloropsis gaditana)
ATGTGCTTAAGTAAGGAACTAATCGTTTGTTCACGCATTTGTTCTAGCAG
TGAGCTTCCTTTACGACAGCGTCCAAGTGAAAGATTGTGGTCAGAATTGG
TTGGGATATAAGTGGTACAAGAGTTCGATTTACCATAGAATTTCCACTTG
GGGACGCGCGAAGATGTCGTGTGCGCTGGTTTGGATCAAATCCTATACAC
ATGCCAAAGCTGACAAGCTGTATCGGGATGCTTTTCTGGTAAGGGATTAC
AGCCACAGATTGGCATTACCCGAACAGATCTACAAAAATGTATTATAACA
GAAATGGTGAGAACGAACCGTATTAGTCGGTAAGGACGCTACAAGCACCT
TTCAATTCTATCCTGCTTGCACGTGGATCTCGGGGCCTGCCTTAATGAGT
TGATTTGTCGTCCAGGGGCCTTATGTAAGTATTTTTAAAGATTCAGGTAC
AAGCATCATATTCACATACAAAAACGCGCAAATTTAAGCGAAATCGTTTG
TATCGTAGGCAGTACGTATACCTCCCATTGTAACCCCCACTGGCGGCAAG
TTGAACCGAGGCGACCCGTCGTGCGAGGATCCCGGGGGCTTTGTGAGACA
AAAGTAGAAAAAAAGAGGTCCATGAAAATCCCGCTCTCGTGCCAAGTCAA
TGCCTCAACTGTTATTCATGTTGGGTACAACTTTATGTCACAGCGATGCG
GATACGCATTTCCCCACTGGGTGAACAAAACCTCGTGGCGAGGTATATAA
CTGCCCGCCACCTCACGGATGCAGCAACACATCAGCCAGCCGCCCTACCC
TCAACGCAGGAGAAGAAAGGACGCAACGGCGACCAAAACTCTTCTCGAAG
GAAAAGGTCGAGACAGACTCATGCATCTGGCGTGTCTGGGCGACAATTTC
TGACGCACCCAGGAGTGCCAGCCGGGACAATGTTTGCCAGGGAGGAGATG
GCGATGAAGAAGCGGATGATGGAGACAAAGGAAGGAGTACAAAAACATTT
GGCCAAGCGTCTAGGCTCTGCTGATGACGTGCTTGAAGAGCAAGGGGAGG
ACGCCCAAAATCGCATCGAACGGGGTCGAAGGACCGGGGTAGCTTCCCTG
GTCGAGGAGCGAATCCAATTAAGCATGATTCGTGGAGAATTTGCCAACCT
GAAACGCAGGGGGAAATTGGAACGGGAGCGCACCCCAGGCCTTGATCGTA
CGACAGACATATTCATGGACGTGCTGAAGCGGAATGGGGTGTTGCCCGAG
TGGATCCAACGTCAGAAGCGGGTGCAGAGCATGACCCGATTGCTCCAGCG
TCGGCTTCACGTGGAGTATGCCCGCGCCTGCATGGACGCGAACCCAGAGC
TGGAATCAGCCGCGAGAGATGTTCCCTTCGTCCGTACCCCGACGTACGAG
GCCTTTTCGGCACGAGTCCATGGTGTACGCTCTATAGCCGAGGACTGTGC
GGTGATCAACAGCGAGATCCTGACATACAATCTGCAAGGTAATTCGTGGC
ATGTCTCGCGTGCATGTTAGCCTATTGAAAAACTGTTCGGGTGTCTGTGA
AGGTTTTAGAAAGATGTAGTAGTATAGTATTGGCATTGTCTGCGAGGTCT
TCACCCCCTTGGATCCCTTGTTTTTACCCTGACAGTCCCTGCCCTCCATT
TGCAACGGCTCAAGCTCGACTTACAGCCGTTGATCGCGGAGGCCGCGCTA
CAAAGGCCGAGTAGCTATCAAGAGGCACGGCAACTGTACCGGTGCGCGGA
TCGAGAGGGACTCCTGGGTGTGACGGCTTTGATGGAGCATCGACTTGACT
ATTTTTCGGACGATGGTTCCATGTATCAAGGGGGGGGAGGGTCGAACATC
ACGACGTACTGGCAAGACCAGAATGGGTTGGGGAGAGGAAAGAGCGGGAG
AAAGAGGCGAGATGAGGCCAGCCAGCACATCTCGGACCTGATGATGATCC
CTATCGACTCCTTGTCCAGAGCGCTCGCCCGACTGTTTTCAATATGACCG
GCACGCCTTTGATCTGTATCGTACCCCAGAAAAAAAGACTTGCGCAGGA back to topCoding sequence (CDS) from alignment at CM002457.1:277513..279561- >rna1300 ID=rna1300|Name=rna1300|organism=Nannochloropsis gaditana|type=CDS|length=3618bp|location=Sequence derived from alignment at CM002457.1:277513..279561- (Nannochloropsis gaditana)
TCCCTGCCCTCCATTTGCAACGGCTCAAGCTCGACTTACAGCCGTTGATC
GCGGAGGCCGCGCTACAAAGGCCGAGTAGCTATCAAGAGGCACGGCAACT
GTACCGGTGCGCGGATCGAGAGGGACTCCTGGGTGTGACGGCTTTGATGG
AGCATCGACTTGACTATTTTTCGGACGATGGTTCCATGTATCAAGGGGGG
GGAGGGTCGAACATCACGACGTACTGGCAAGACCAGAATGGGTTGGGGAG
AGGAAAGAGCGGGAGAAAGAGGCGAGATGAGGCCAGCCAGCACATCTCGG
ACCTGATGATGATCCCTATCGACTCCTTGTCCAGAGCGCTCGCCCGACTG
TTTTCAATATGACGATGCGGATACGCATTTCCCCACTGGGTGAACAAAAC
CTCGTGGCGAGGTATATAACTGCCCGCCACCTCACGGATGCAGCAACACA
TCAGCCAGCCGCCCTACCCTCAACGCAGGAGAAGAAAGGACGCAACGGCG
ACCAAAACTCTTCTCGAAGGAAAAGGTCGAGACAGACTCATGCATCTGGC
GTGTCTGGGCGACAATTTCTGACGCACCCAGGAGTGCCAGCCGGGACAAT
GTTTGCCAGGGAGGAGATGGCGATGAAGAAGCGGATGATGGAGACAAAGG
AAGGAGTACAAAAACATTTGGCCAAGCGTCTAGGCTCTGCTGATGACGTG
CTTGAAGAGCAAGGGGAGGACGCCCAAAATCGCATCGAACGGGGTCGAAG
GACCGGGGTAGCTTCCCTGGTCGAGGAGCGAATCCAATTAAGCATGATTC
GTGGAGAATTTGCCAACCTGAAACGCAGGGGGAAATTGGAACGGGAGCGC
ACCCCAGGCCTTGATCGTACGACAGACATATTCATGGACGTGCTGAAGCG
GAATGGGGTGTTGCCCGAGTGGATCCAACGTCAGAAGCGGGTGCAGAGCA
TGACCCGATTGCTCCAGCGTCGGCTTCACGTGGAGTATGCCCGCGCCTGC
ATGGACGCGAACCCAGAGCTGGAATCAGCCGCGAGAGATGTTCCCTTCGT
CCGTACCCCGACGTACGAGGCCTTTTCGGCACGAGTCCATGGTGTACGCT
CTATAGCCGAGGACTGTGCGGTGATCAACAGCGAGATCCTGACATACAAT
CTGCAAGATGTGCTTAAGTAAGGAACTAATCGTTTGTTCACGCATTTGTT
CTAGCATCCCTGCCCTCCATTTGCAACGGCTCAAGCTCGACTTACAGCCG
TTGATCGCGGAGGCCGCGCTACAAAGGCCGAGTAGCTATCAAGAGGCACG
GCAACTGTACCGGTGCGCGGATCGAGAGGGACTCCTGGGTGTGACGGCTT
TGATGGAGCATCGACTTGACTATTTTTCGGACGATGGTTCCATGTATCAA
GGGGGGGGAGGGTCGAACATCACGACGTACTGGCAAGACCAGAATGGGTT
GGGGAGAGGAAAGAGCGGGAGAAAGAGGCGAGATGAGGCCAGCCAGCACA
TCTCGGACCTGATGATGATCCCTATCGACTCCTTGTCCAGAGCGCTCGCC
CGACTGTTTTCAATATGACGATGCGGATACGCATTTCCCCACTGGGTGAA
CAAAACCTCGTGGCGAGGTATATAACTGCCCGCCACCTCACGGATGCAGC
AACACATCAGCCAGCCGCCCTACCCTCAACGCAGGAGAAGAAAGGACGCA
ACGGCGACCAAAACTCTTCTCGAAGGAAAAGGTCGAGACAGACTCATGCA
TCTGGCGTGTCTGGGCGACAATTTCTGACGCACCCAGGAGTGCCAGCCGG
GACAATGTTTGCCAGGGAGGAGATGGCGATGAAGAAGCGGATGATGGAGA
CAAAGGAAGGAGTACAAAAACATTTGGCCAAGCGTCTAGGCTCTGCTGAT
GACGTGCTTGAAGAGCAAGGGGAGGACGCCCAAAATCGCATCGAACGGGG
TCGAAGGACCGGGGTAGCTTCCCTGGTCGAGGAGCGAATCCAATTAAGCA
TGATTCGTGGAGAATTTGCCAACCTGAAACGCAGGGGGAAATTGGAACGG
GAGCGCACCCCAGGCCTTGATCGTACGACAGACATATTCATGGACGTGCT
GAAGCGGAATGGGGTGTTGCCCGAGTGGATCCAACGTCAGAAGCGGGTGC
AGAGCATGACCCGATTGCTCCAGCGTCGGCTTCACGTGGAGTATGCCCGC
GCCTGCATGGACGCGAACCCAGAGCTGGAATCAGCCGCGAGAGATGTTCC
CTTCGTCCGTACCCCGACGTACGAGGCCTTTTCGGCACGAGTCCATGGTG
TACGCTCTATAGCCGAGGACTGTGCGGTGATCAACAGCGAGATCCTGACA
TACAATCTGCAAGATGTGCTTAAGTAAGGAACTAATCGTTTGTTCACGCA
TTTGTTCTAGCATCCCTGCCCTCCATTTGCAACGGCTCAAGCTCGACTTA
CAGCCGTTGATCGCGGAGGCCGCGCTACAAAGGCCGAGTAGCTATCAAGA
GGCACGGCAACTGTACCGGTGCGCGGATCGAGAGGGACTCCTGGGTGTGA
CGGCTTTGATGGAGCATCGACTTGACTATTTTTCGGACGATGGTTCCATG
TATCAAGGGGGGGGAGGGTCGAACATCACGACGTACTGGCAAGACCAGAA
TGGGTTGGGGAGAGGAAAGAGCGGGAGAAAGAGGCGAGATGAGGCCAGCC
AGCACATCTCGGACCTGATGATGATCCCTATCGACTCCTTGTCCAGAGCG
CTCGCCCGACTGTTTTCAATATGACGATGCGGATACGCATTTCCCCACTG
GGTGAACAAAACCTCGTGGCGAGGTATATAACTGCCCGCCACCTCACGGA
TGCAGCAACACATCAGCCAGCCGCCCTACCCTCAACGCAGGAGAAGAAAG
GACGCAACGGCGACCAAAACTCTTCTCGAAGGAAAAGGTCGAGACAGACT
CATGCATCTGGCGTGTCTGGGCGACAATTTCTGACGCACCCAGGAGTGCC
AGCCGGGACAATGTTTGCCAGGGAGGAGATGGCGATGAAGAAGCGGATGA
TGGAGACAAAGGAAGGAGTACAAAAACATTTGGCCAAGCGTCTAGGCTCT
GCTGATGACGTGCTTGAAGAGCAAGGGGAGGACGCCCAAAATCGCATCGA
ACGGGGTCGAAGGACCGGGGTAGCTTCCCTGGTCGAGGAGCGAATCCAAT
TAAGCATGATTCGTGGAGAATTTGCCAACCTGAAACGCAGGGGGAAATTG
GAACGGGAGCGCACCCCAGGCCTTGATCGTACGACAGACATATTCATGGA
CGTGCTGAAGCGGAATGGGGTGTTGCCCGAGTGGATCCAACGTCAGAAGC
GGGTGCAGAGCATGACCCGATTGCTCCAGCGTCGGCTTCACGTGGAGTAT
GCCCGCGCCTGCATGGACGCGAACCCAGAGCTGGAATCAGCCGCGAGAGA
TGTTCCCTTCGTCCGTACCCCGACGTACGAGGCCTTTTCGGCACGAGTCC
ATGGTGTACGCTCTATAGCCGAGGACTGTGCGGTGATCAACAGCGAGATC
CTGACATACAATCTGCAAGATGTGCTTAAGTAAGGAACTAATCGTTTGTT
CACGCATTTGTTCTAGCA back to top
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