EWM29344.1, cds1298 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|585111872|gb|EWM29344.1| (DnaJ subfamily C member 28 [Nannochloropsis gaditana]) HSP 1 Score: 827.78 bits (2137), Expect = 0.000e+0 Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0
Query: 1 MCLSKELIVCSRICSSTMRIRISPLGEQNLVARYITARHLTDAATHQPAALPSTQEKKGRNGDQNSSRRKRSRQTHASGVSGRQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKHLAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGKLERERTPGLDRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQRPSSYQEARQLYRCADREGLLGVTALMEHRLDYFSDDGSMYQGGGGSNITTYWQDQNGLGRGKSGRKRRDEASQHISDLMMIPIDSLSRALARLFSI 401
MCLSKELIVCSRICSSTMRIRISPLGEQNLVARYITARHLTDAATHQPAALPSTQEKKGRNGDQNSSRRKRSRQTHASGVSGRQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKHLAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGKLERERTPGLDRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQRPSSYQEARQLYRCADREGLLGVTALMEHRLDYFSDDGSMYQGGGGSNITTYWQDQNGLGRGKSGRKRRDEASQHISDLMMIPIDSLSRALARLFSI
Sbjct: 1 MCLSKELIVCSRICSSTMRIRISPLGEQNLVARYITARHLTDAATHQPAALPSTQEKKGRNGDQNSSRRKRSRQTHASGVSGRQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKHLAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGKLERERTPGLDRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQRPSSYQEARQLYRCADREGLLGVTALMEHRLDYFSDDGSMYQGGGGSNITTYWQDQNGLGRGKSGRKRRDEASQHISDLMMIPIDSLSRALARLFSI 401
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|553191913|ref|XP_005855483.1| (hypothetical protein NGA_0131300 [Nannochloropsis gaditana CCMP526] >gi|422293585|gb|EKU20885.1| hypothetical protein NGA_0131300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 440.654 bits (1132), Expect = 2.369e-153 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query: 191 MDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQRPSSYQEARQLYRCADREGLLGVTALMEHRLDYFSDDGSMYQGGGGSNITTYWQDQNGLGRGKSGRKRRDEASQHISDLMMIPIDSLSRALARLFSI 401
MDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQRPSSYQEARQLYRCADREGLLGVTALMEHRLDYFSDDGSMYQGGGGSNITTYWQDQNGLGRGKSGRKRRDEASQHISDLMMIPIDSLSRALARLFSI
Sbjct: 1 MDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQRPSSYQEARQLYRCADREGLLGVTALMEHRLDYFSDDGSMYQGGGGSNITTYWQDQNGLGRGKSGRKRRDEASQHISDLMMIPIDSLSRALARLFSI 211
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|553184029|ref|XP_005854013.1| (hypothetical protein NGA_0426510 [Nannochloropsis gaditana CCMP526] >gi|422295051|gb|EKU22350.1| hypothetical protein NGA_0426510 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 114.005 bits (284), Expect = 2.679e-24 Identity = 71/197 (36.04%), Postives = 113/197 (57.36%), Query Frame = 0
Query: 153 VEERIQLSMIRGEFANLKRRGKLERERTPGL----DRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESA---ARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPL--IAEAALQRPSSYQE---ARQLYRCADREGLLG-VTALMEHRLD 336
VEE+IQL+M +G+F +LK +GK ER G D+T+ +MDVL ++GV P W++R R++ R L RL E+A+ ++ E A ++ R + +RV G+ + ED A IN+EI YNLQVP++ LQR+++ L+ + + + + ++ E AR + R A++EG+ VTAL RLD
Sbjct: 108 VEEKIQLAMAQGDFDDLKGKGK-PLERLEGYLYATDKTSATYMDVLSKSGVKPVWVERSSRIRDAERRLVHRLEAEWAKVVLETWEHGEGAEKRGKEGAMAR------WKSRVVGLAGLREDVAWINAEIDLYNLQVPSMSLQRMRMTLEEVCDVVQGGEKEGGTWMERGTARAVVRAAEKEGVFSTVTALGSLRLD 297
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|585109651|gb|EWM27416.1| (DnaJ subfamily C, member 28 [Nannochloropsis gaditana]) HSP 1 Score: 99.3673 bits (246), Expect = 7.085e-19 Identity = 56/147 (38.10%), Postives = 88/147 (59.86%), Query Frame = 0
Query: 153 VEERIQLSMIRGEFANLKRRGKLERERTPGL----DRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQ 295
VEE+IQL+M +G+F +LK +GK ER G D+T+ +MDVL ++GV P W++R R++ R L RL E+A+ ++ E A + + + +RV G+ + ED A IN+EI YNLQVP++ LQR+++ L+
Sbjct: 108 VEEKIQLAMAQGDFDDLKGKGK-PLERLEGYLYATDKTSATYMDVLSKSGVKPVWVERSSRIRDAERRLVHRLEAEWAKVVLETWEHGEGAEKR---GKEGAMARWKSRVVGLAGLREDVAWINAEIDLYNLQVPSMSLQRMRMTLE 250
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|1133415999|ref|XP_019880870.1| (PREDICTED: dnaJ homolog subfamily C member 28 [Aethina tumida] >gi|1133416001|ref|XP_019880871.1| PREDICTED: dnaJ homolog subfamily C member 28 [Aethina tumida]) HSP 1 Score: 88.1965 bits (217), Expect = 1.036e-15 Identity = 69/232 (29.74%), Postives = 116/232 (50.00%), Query Frame = 0
Query: 83 RQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKHLAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGKL---ERERTPGLDRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQRPSSYQE 311
RQ+L++ G+ +GT F RE+ K R M+ E V +H ++ + ++ L ++ +++I+ + G LVE+ IQ SM +GEF+NL GK E R P +D T +VL NG PEWI QK ++S L+ L Y R P + T +S V+ + + ++ IN +I +NL VP L Q +++ L+ A+ A++ S+++
Sbjct: 110 RQYLSYGGIGSGTPFQREKQYTKVRAMQAAENVYQHRVAKVTAEENTLMDKAP-LKHKIK--TKYGFDRLVEDLIQESMSKGEFSNLSGAGKPLRNEHNRNPYVDFVTHKLNEVLIDNGFTPEWITLQKEIRSEAHHLRTILF--YERQFFSPFP-----------LNTDENIIWSEIVYKYKQMVDE---INKKIAKFNLVVPVLDKQMIQISLEKE-AQKAIKDGKSFKD 321
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|332376817|gb|AEE63548.1| (unknown [Dendroctonus ponderosae]) HSP 1 Score: 85.1149 bits (209), Expect = 1.231e-14 Identity = 64/216 (29.63%), Postives = 109/216 (50.46%), Query Frame = 0
Query: 83 RQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKHLAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGKL---ERERTPGLDRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQ 295
RQ+L++ GV +G + RE+ K R M+ E + H ++ + + L ++ +++I+ + G LVE+ IQ SM RGEF+NLK GK + R P +D TT +VL NG PEWI QK ++ L++ L E R + P S ++ +S +V+ + + + +N +I +NL VP L+ Q +++ L+
Sbjct: 117 RQYLSYGGVGSGNPYQREKQYTKMRAMQASENLYNHRMGKVSAGEHALMDKM-PLKHKIKT--KYGFDRLVEDLIQESMSRGEFSNLKNSGKPLPDHQNRNPYVDFTTHKLNEVLIENGFTPEWILLQKEIREEATSLRKSLFSE--RQYFGSYP--LSVEDNI---------EWSEKVYNYKQVVDQ---LNKKIAKFNLVVPVLNKQMIQISLE 313
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|1130209322|ref|XP_019754168.1| (PREDICTED: dnaJ homolog subfamily C member 28 [Dendroctonus ponderosae] >gi|478261323|gb|ENN80739.1| hypothetical protein YQE_02847, partial [Dendroctonus ponderosae] >gi|546680358|gb|ERL90637.1| hypothetical protein D910_07984 [Dendroctonus ponderosae]) HSP 1 Score: 85.1149 bits (209), Expect = 1.327e-14 Identity = 64/216 (29.63%), Postives = 109/216 (50.46%), Query Frame = 0
Query: 83 RQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKHLAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGKL---ERERTPGLDRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQ 295
RQ+L++ GV +G + RE+ K R M+ E + H ++ + + L ++ +++I+ + G LVE+ IQ SM RGEF+NLK GK + R P +D TT +VL NG PEWI QK ++ L++ L E R + P S ++ +S +V+ + + + +N +I +NL VP L+ Q +++ L+
Sbjct: 117 RQYLSYGGVGSGNPYQREKQYTKMRAMQASENLYNHRMGKVSAGEHALMDKM-PLKHKIKT--KYGFDRLVEDLIQESMSRGEFSNLKNSGKPLPDHQNRNPYVDFTTHKLNEVLIENGFTPEWILLQKEIREEATSLRKSLFSE--RQYFGSYP--LSVEDNI---------EWSEKVYNYKQVVDQ---LNKKIAKFNLVVPVLNKQMIQISLE 313
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|768424088|ref|XP_011552982.1| (PREDICTED: dnaJ homolog subfamily C member 28-like [Plutella xylostella]) HSP 1 Score: 84.7297 bits (208), Expect = 1.635e-14 Identity = 74/247 (29.96%), Postives = 116/247 (46.96%), Query Frame = 0
Query: 83 RQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKH-LAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGK--LERERTPGLDRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQR--PSSYQEARQLYRCADREGL 324
RQ+L+ GV GT R+ K R + + V +H +AK + S + +++++ + + + G LVE+ IQ S+ +GEF NL +GK ++ R P +D TT +VL NG +PEWI K + L++ L + R + P E P + S G IAE IN +I YNL VP L+ QRL + L+ I + LQ S YQ+ + ++ E +
Sbjct: 112 RQYLSFEGVGHGTPSQRQRQWEKARAQQAADNVMEHRVAKSMASENTLMKKEKNYFAKKHDIKTKYGFDRLVEDLIQESISKGEFENLSGKGKPLKDQNRNPYVDFTTHKINEVLINNGFVPEWITMNKEIAQEIEALKQELQKD--RMFLGPYPLSEEEG--------PKWAKLS---QGYEGIAES---INKKINHYNLIVPLLNKQRLHIQLKE-ICDDVLQNGIHSVYQKEDETHKELQYEAV 341
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|768438516|ref|XP_011560844.1| (PREDICTED: dnaJ homolog subfamily C member 28-like [Plutella xylostella]) HSP 1 Score: 83.5741 bits (205), Expect = 4.843e-14 Identity = 72/247 (29.15%), Postives = 115/247 (46.56%), Query Frame = 0
Query: 83 RQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKH-LAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGK--LERERTPGLDRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVEYARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQR--PSSYQEARQLYRCADREGL 324
RQ+L+ GV GT R+ K R + + V +H +AK + S + +++++ + + + G LVE+ IQ S+ +GEF NL +GK ++ R P +D TT +VL NG +PEWI K + L++ L + R + P E ++ G IAE IN +I YNL VP L+ QRL + L+ I + LQ S YQ+ + ++ E +
Sbjct: 112 RQYLSFEGVGHGTPSQRQRQWEKARAQQAADNVMEHRVAKSMASENTLMKKEKNYFAKKHDIKTKYGFDRLVEDLIQESISKGEFENLSGKGKPLKDQNRNPYVDFTTHKINEVLINNGFVPEWITMNKEIAQEIEALKQELQKD--RMFLGPYPLSEEEGH-----------KWAKLSQGYEGIAES---INKKINHYNLIVPLLNKQRLHIQLKE-ICDDVLQNGIHSVYQKEDETHKELQYEAV 341
BLAST of EWM29344.1 vs. NCBI_GenBank
Match: gi|1060154446|ref|XP_017854059.1| (PREDICTED: dnaJ homolog subfamily C member 28-like [Drosophila busckii]) HSP 1 Score: 83.1889 bits (204), Expect = 6.257e-14 Identity = 67/229 (29.26%), Postives = 111/229 (48.47%), Query Frame = 0
Query: 83 RQFLTHPGVPAGTMFAREEMAMKKRMMETKEGVQKHLAKRLGSADDVLEEQGEDAQNRIERGRRTGVASLVEERIQLSMIRGEFANLKRRGK---LERERTPGLDRTTDIFMDVLKRNGVLPEWIQRQKRVQSMTRLLQRRLHVE--YARACMDANPELESAARDVPFVRTPTYEAFSARVHGVRSIAEDCAVINSEILTYNLQVPALHLQRLKLDLQPLIAEAALQRP 306
RQ+L++ G+ GT F R++ + R M+ +E V +H ++ + + L +G + + + GV +VE+ IQ +M +G+F NLK GK L + + P LD TT ++ NG PEWI K ++ L+++L E Y PE ++A ++ F A++H ++ +N I YNL VP L Q +L L L AE+ + P
Sbjct: 116 RQYLSNEGIGIGTPFQRQKQYQQVRAMKAQERVLEHRIEKAAAGEHALMRKGGNYYGKHAIKTKYGVDRVVEDLIQEAMSKGDFNNLKGTGKPLSLAQTQNPYLDFTTHKLNKIMLDNGFTPEWIMLSKDIRESAHKLKQQLRQERSYYGEWPLTQPEQQAA-----------WQKF-AQLH-----VDEVQQLNKLIDKYNLIVPILENQFFRLQLDKL-AESVFKEP 326 The following BLAST results are available for this feature:
BLAST of EWM29344.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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