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Properties
| Property Name | Value |
|---|
| Product | peroxisomal membrane protein 2 |
| Orig transcript id | gnl|cribi|Naga_100028g6.3318.mrna |
| Orig protein id | gnl|cribi|Naga_100028g6.3318 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:261053..262244 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1292 ID=rna1292|Name=rna1292|organism=Nannochloropsis gaditana|type=mRNA|length=2501bp
CCGTTTCCAGTCCCAAAAAGAGTGGAGGAACGAGAGGGGACGTCAACATT
CCTGCGTTGTCTGTCGTCTCCACTTTTCAGTCTCTCGTTTGCGGCCGTGC
CACCTTTTTTTCTCCCGTGGTGAGAGGGAATGGATGGTGGAGAGGCCTTC
TGATATTTTTTTCGAGTGACCTATCAAAAAGCGACGTGATGTCTTCTCCC
ACCGTTAGCAAGTTCGCACTGCCCACGCATGCTCCTTTCATCATCCCTCT
CACTTTATTTTGCTTGGTTGTCTGACGTGTGGGAAGTAATGTCAACCAAA
CGACGTCCCCAGCCGTGCGAACAAATAAAAAAGCAATGCGTGAGGTAGGC
TCCTCCTCTTTCTTGGCGCGGTACTCGACCTCATCCTGTAACATCAACCT
CCACAAAAGAAGTAGCATCCGCACCGTAAAATCGTTGGGCCAACAAAGCA
AACGCGCGAGGTCACCTGTTATAGAGTCGGATTTCTATCAGGTGTGGTCA
TCGCGTCACTTTTTCAGCATGACCAAGCCCAAAGTCCCGCGGATGGCCAT
GATTTTGGCCGCCTGCTTCCAGAATTTGGCCTGCGGCGGTCTCATCTTTG
GATGGGCAGCCATCTCCAGCTCCCTTCTCATCGCCTCGAACGAGGAAGGC
GGGCCCGCCTTGAGCCGCGACGCTGTCCACCGGCTCTTCGTCATGGCGAC
GTCCATCAATTTCACGGCCCCGCTCTTGCTAGGGGTTCTCCTGGATGCCT
ACGGTCCCCGGTTTTGTTCCGCGCTGAGCATATTTCTGGTCGGAGCCGGC
TTTGTGCTCTTCTCCGCCTCCTCCCCCTCCCTCCCCACCCACCTCCCCGC
CGTCATCCTCATAGCCTTTGGCGGACCCGGCGTCCAGTCCTCCATCATCC
ACCTCTCCAATTTGTATCCAGCAAGCAAGGCGACTGTCACGAGCGTCATC
ACCGGGTCTTTTAACCTCTCCTTCTTCATCTTCTTCATTTTCGACCGGCT
CTGGGACCGGTTCGGACTCACCTACCAGGAGATTTTTGCCGGCTACACAA
CCGTCTGCCTCTTTGCCCTCCTCCTCTCCCTCTTCCTTTGGCCGGACCGA
CCCTTCTCGTTCCAAGAACAAGCCCTCGAGGAAACTCTGCCCGACCAACT
GGCCACGGCTCGGATCGGGCCCATTCGGGCGCCCTCTGTCTTCAAGAAAA
CATCCTTTGCCCCCACCGGACCCCCCCTGGCAGGCGGGTCTCGTTCCCTG
CCCAGCGCCCGGGGAGGCAGCGACAGCAAGGACAAGAATGCAAAGGAGAC
AACGGGCCTGTTGGGGGGATCGGCGGCTTTGGGCCGGCCGACGAGCCAGG
GGGGAAGCTGGGAAGAGGAGGACATCAAGGAGGCATCTTTTTGGGCACAA
CTTCGGTCTGCGCCCTTCCTCCGGGTGACCATTTTCATCGTGGTCGCCTC
CTTTTGGGCAAATTTCTACATTGGCACCATCGACGTGCAGCTGGCAGACA
ACCACATGCTCACCCCCGCGAAACAAAATTTCATGGTCCGCCTGTTCACG
GCCATCACCACGGCGGGCGTGCTGGGCATTCCAGTCGTGGGGAAACTGAT
GGACAGCTACGGCTTTGTCGCCACGGCCACTGTCACAGTGAGCATGGCAG
TGGTCTATAGCTTGGGCATACTCTTTGAACAGACGCATGGGGGCACGCTG
CCCCTCATCGTCGCCTTTGTCGCCTACGCACTTTTTCGGACATTCCTCTT
CACCTATTTTTTTGCCTACCTGGCCGACGCGCTCGGTTTCCGGTTTTTTG
GCGTCTTGGCTGGGGTCTCCTTTCTAATCGCAGGCTTTGCCGGCCTTTTG
CAGTCACCATTGATGGAGTACGCCCAGGGAGACTGTCACTTGACGTCCAC
GGCCGTGCCTGGGTGCGATTCCGGGAAATGGCCGAGGCTGAACCTCTACC
AGCTCTTGTGCCTCGCCTTGCTCTACTTGATCCCTGTTTTGGATCAGCAG
GCAGCCAGCAAAGCACGAACGGCTAAGCAAGCTGGGGATAGAAGAGGAAG
GGGTGGGGAAGGTGTCGTCCCCCGGTTGCCCTATCAGACGGCAAGCGGCT
TGCGGCAGCAGCAGGCGACGTACATGGGGAGCTCGGATGCCAAAGGAGAG
CGGCAAGGGAAGGGGGGGGGGGTAGTTTAGCCGAACTCATTAGAGAAGGA
TCAGTGGTGCTCCAGCCGACATCACTTGTACGGTCTGGCCTTATGCCTGC
CTTTTCGCTCGGGACCGGTCTTTATTTTCGTGCCCCTTCCCTGAACCATG
GAGGGATGTGAAGCCGCCTGCATCTATGCAGCGGCCTCGAACTGGTTGCG
GTAGGGTCCGAGACATGGCTAGGGTTGGGTGTGGAATGGGTAAATCAAGC
GAAAGACACAAAAGCATTCGGTAATATTCCACGAAGTGCAGGCTGCGCGG
TGCTTGTTCTTCTAGGGTACTAGGGGGCCTGAATGGAACCGAAGTACCAC
C back to topprotein sequence of rna1292 >rna1292-protein ID=rna1292-protein|Name=rna1292|organism=Nannochloropsis gaditana|type=polypeptide|length=259bp
MTTHTRRDAHLLRMAAVLLLLFGGSQAFFTPARQSLRPVIRRSSRSRGAL
SAVDANDLFQGYMGLIHTHPLITKCATSAMIVPLGDLSAQAIETYKAKQT
GAKGNDEEEDLGIDWKRVLRFLIFGATLQPIWNHYYFQWFDHLIPPPSDP
ISLTNVLKVALDQGIQAPIFTVVIFAYLDLLEGKNLEETKAQIKRDFWPC
ITTNWWVWIPITCANYAFVPPDLRVLFVNVAFLGWCVFLSLLVNKKDGEP
TSQTRPSES back to topmRNA from alignment at CM002457.1:261053..262244+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1292 ID=rna1292|Name=rna1292|organism=Nannochloropsis gaditana|type=mRNA|length=1192bp|location=Sequence derived from alignment at CM002457.1:261053..262244+ (Nannochloropsis gaditana)
TGTGCGCGTTTCCATCCCAGAAACATTAGTGTGATCATATGTATTCTACG
GTAATCACATTCGAGTATTGCTGAGGACTGATTTCGAGCGTTCATGTTTC
GGCAAAAATGTTTTCTTGTCATGCAGTCTCACGCTGGGTCGAACCAAACA
TCTATTTCGACAGAAAATGACCACACACACGAGAAGAGACGCTCATTTGT
TGAGGATGGCGGCCGTCCTTCTTCTACTCTTTGGCGGCAGCCAGGCGTTT
TTCACGCCTGCTCGTCAGAGTTTGCGTCCTGTGATTCGACGATCAAGTCG
CAGTCGGGGAGCGCTGTCGGCTGTGGACGCGAACGACCTTTTTCAAGGCT
ACATGGGGCTTATCCACACACACCCTTTGATTACGAAATGTGCAACAAGT
GCTATGATTGTACCATTAGGTGATCTCTCGGCTCAAGCAATCGAGACATA
CAAGGCCAAGCAGACCGGGGCAAAAGGaaacgacgaggaagaggacttaG
GAATCGACTGGAAGCGCGTGCTGCGCTTCCTCATTTTCGGAGCGACACTG
CAGCCCATTTGGAACCATTACTACTTCCAGTGGTTCGACCATCTgattcc
cccgccctccgaccccATCAGCCTGACGAACGTGCTCAAGGTTGCCCTCG
ATCAAGGTATCCAAGCCCCGATCTTCACAGTGGTCATTTTCGCCTATTTG
GACTTGTTAGAAGGGAAAAACCTGGAGGAAACTAAGGCACAAATCAAGCG
GGATTTCTGGCCGTGCATTACAACCAACTGGTGGGTATGGATTCCCATTA
CTTGCGCGAATTATGCCTTTgtcccccccgacctcagGGTCTTGTTCGTG
AACGTCGCCTTCCTGGGGTGGTGTGTCTTTTTGTCCCTGCTGGTCAATAA
AAAGGATGGAGAGCCTACGTCACAAACAAGGCCATCGGAATCGTAAGATT
GCTGTGAGGGATGTATTTTACTTTTTCGTGCAGGGGTGTACAAGTAGAGG
TGTTCGTGTGCGTGTCTTGGAATATAACCGAAACAAGCGACCATCAAGGG
TCGGCGCGCGCCGCCGAGTGACACATACAAAGGTTGATTTATTCAAATTG
TCAGAGTAAGCTTAGCTATGGCGTTGGCAGATGGTGATCCGAAGACGGGG
TCACGGTagcaaaaaaagaagaaaaaatctTGGCGATTGACC back to topCoding sequence (CDS) from alignment at CM002457.1:261053..262244+ >rna1292 ID=rna1292|Name=rna1292|organism=Nannochloropsis gaditana|type=CDS|length=780bp|location=Sequence derived from alignment at CM002457.1:261053..262244+ (Nannochloropsis gaditana)
ATGACCACACACACGAGAAGAGACGCTCATTTGTTGAGGATGGCGGCCGT
CCTTCTTCTACTCTTTGGCGGCAGCCAGGCGTTTTTCACGCCTGCTCGTC
AGAGTTTGCGTCCTGTGATTCGACGATCAAGTCGCAGTCGGGGAGCGCTG
TCGGCTGTGGACGCGAACGACCTTTTTCAAGGCTACATGGGGCTTATCCA
CACACACCCTTTGATTACGAAATGTGCAACAAGTGCTATGATTGTACCAT
TAGGTGATCTCTCGGCTCAAGCAATCGAGACATACAAGGCCAAGCAGACC
GGGGCAAAAGGaaacgacgaggaagaggacttaGGAATCGACTGGAAGCG
CGTGCTGCGCTTCCTCATTTTCGGAGCGACACTGCAGCCCATTTGGAACC
ATTACTACTTCCAGTGGTTCGACCATCTgattcccccgccctccgacccc
ATCAGCCTGACGAACGTGCTCAAGGTTGCCCTCGATCAAGGTATCCAAGC
CCCGATCTTCACAGTGGTCATTTTCGCCTATTTGGACTTGTTAGAAGGGA
AAAACCTGGAGGAAACTAAGGCACAAATCAAGCGGGATTTCTGGCCGTGC
ATTACAACCAACTGGTGGGTATGGATTCCCATTACTTGCGCGAATTATGC
CTTTgtcccccccgacctcagGGTCTTGTTCGTGAACGTCGCCTTCCTGG
GGTGGTGTGTCTTTTTGTCCCTGCTGGTCAATAAAAAGGATGGAGAGCCT
ACGTCACAAACAAGGCCATCGGAATCGTAA back to top
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