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Properties
| Property Name | Value |
|---|
| Product | Anaphase-promoting complex, subunit 10/DOC domain protein |
| Orig transcript id | gnl|cribi|Naga_100042g23.5660.mrna |
| Orig protein id | gnl|cribi|Naga_100042g23.5660 |
| Gene | APC10 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:195606..197089 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1268 ID=rna1268|Name=rna1268|organism=Nannochloropsis gaditana|type=mRNA|length=5493bp
GCTTCCTTGTGGATGTGCCGCTACCTCGTCTGGGAAAAATGCACTCTCTA
TATCCCACCGCGGACAATCTTCCACGAAGAGAAGTGATTTTCTGTGGCGT
TTTCTTATGTGTCACTTTCTTTTTCCGAACGGGTGCAATGTGACAGGACC
TCACTTCGACTGATTGCAGAAGATGGTGGCGGAGGGAGGTAAACGAGGTC
GTCCAGCTGTGAGTGGGAGCAACAGCAACCACAACTCGTCGGGTTCTAAA
GCTGTTAAAACATCTGCATCGGCAACGACTGGAGCTGGCGCAGGCAGTCG
TAGCAATGCTTCCGGCGGCTCCAAGCCTCTTGGCGCCTTGAGACACATCT
CACCGATACCCCTCAGAGAGAGCGCGGAGTTCAATGGTGATCAAGGCTTG
GAACTCCCGCTCATCCGACATGGGAACCCAGGCTCACTGGTCCTGGTGGA
CGGCTCTGTTCATCAAGGCTTTGGGTTTGGCGCCGACGTCCCCGTGGCGG
GTGAGGTTGTTTTCAATACCGGCATGGTAGGGTACCCGGAGGCCTTGACT
GATCCTTCCTACCGCGGCCAGATACTGGTGCTGACCTATCCCATGGTGGG
TAACTACGGGGTGCCTTCTGAGGATGCCCTGGACGCGCACGGTCTGCCTC
TGTACTTCGAAAGCCGGAAGATTCATGTCGCCGGGCTCATCGTAGCCAGC
TACTCGGCCGACCACTCCCATTGGAACAGCATCAAAAGCCTGGGTAAATG
GTTGCAGGAACACGGTGTGCCTGCCTTGTACGGGATTGATACCAGGGCCT
TGACCAAGAAGATCCGAGAGGCGGGGGCCATCCTGGGGAAGATCGAATTC
AAAACGCAGGACAAGCAGCGCGGGAAGCAGAAAGGGGGGGCGGGCACAAA
CGTAGATTTTCTGGATCCAAACAAGACAAACCTGGTTGCTGAGGTCTCCA
CCAAGCAAGTACGGGTGTACGGGGAAGGGAACAGGCCCCGGATTCTCGCC
TTCGACTGCGGGATGAAGTACAACATCATCCGGTACTTTGTCAAGCACCA
TGCGGTGGAATTCACGGTGGTGCCCTACGACTACGACCTGCAAGCCAACC
CGTCCAAACTGGAATGGGAAGGCATCTTCATCTCCAACGGCCCGGGAGAC
CCGACCATGTGCGCGGCCACGATCAAGAGCCTGCAGTGGGCCATGGGCCT
GCCCACGCCCAAACCCATCTTTGGAATTTGCCTGGGGAACCAATTGTTGG
CTTTGGCCGCGGGGTCCACCACCTACAAAATGAAGTACGGAAACAGGGGG
ATGAACCAGCCGTGCGTGGACATGCGCACGACCAAATGCTACATTACGGC
CCAGAACCATGGCTTCGCGGTCGACTCCGGGAGCCTGCCCGCGGATTGGA
AGACCTTCTTTTTGAATGCCAACGACTTTACGAACGAGGGGATCGTACAC
ACGTCCAAACCTTTCTTCTCCGTCCAGTTCCATCCCGAGGCCTGCGGTGG
TCCTACGGACACCGCCTTCCTCTTTGAGACCTTCATCAATTTGGTGCGTG
GCTCCCCCCATCAACTCTCCCTGCTGGATCCCTCCCTTTACCAACGGTTC
AAGTACAAAAAAGTCCTGCTGGTTGGTTCGGGGGGTCTCTCTATCGGCCA
AGCTGGAGAATTCGACTACTCGGGGTCACAGGCGATCAAGGCCCTGAAGG
AGGAAGGGATCGAGGTCATCCTCATCAACCCCAACGTAGCCACGGTGCAG
ACCTCGAAGAGCCTGGGTAAGGCGTCCCCCGACAAGGTCTACTTCCTTCC
CATTCGCCCCGAGGTGGTGCTGGATATCATTAAGAAGGAGAAACCGGACG
GGATCATGGTGAACGTGGGGGGGCAGACCGCCTTGAACGTCGGCATCAAG
CTGTGGGAGTCGGGCGACCTCCAGAAGCACAGCGTCCGGGTCATGGGCAC
CCCCATCAACACCATCGTGGCCACCGAGGACCGGGAGATATTCTCGGAGA
AACTTCGAGAGATCGATGAAACCTTGGCTTTGTCCTACCCGGCCACCAAC
ATGGAAGAAGCCATCGCCGCTGCCAAGAAGATTGGGTATCCCGTCCTGAT
TCGGGCTGCCTACGCACTTGGAGGGCTGGGCTCAGGCTTCGCTGAAGACG
AGGCGGAGCTCATTGCCCTGGCCGAGAAGGCCTTCGCATCGTCTTCACAA
ATTTTGATCGACCAAGACCTGCGTGGGTGGAAGGAGATTGAGTACGAGGT
GGTTCGAGACATCGAAGATAATTGCGTCACAGTCTGTAACATGGAAAATT
TCGACCCTCTGGGCATCCACACCGGTGACTCGATCGTCATCGCTCCCTCC
CAAACCCTCAGTAATCAGGAGTACTACATGCTCCGGTCCACTTCCATCAA
AGTCATCCGACACCTGGGAATCATTGGGGAGTGCAACATCCAGTTCGCCC
TTCACCCGGAGTCGGAGAGATATTGCATCATCGAAGTGAACGCCCGACTC
TCACGGTCCTCAGCCTTGGCCAGCAAAGCTACCGGCTACCCCCTGGCCTA
CGTGGCAACCAAGCTGTGCCTAGGGAAGGACCTGGTTTCGATCCGCAACA
GCGTCACCAAAACGACGACGGCGTGCTTTGAGCCTTCTTTGGATTACTGT
GTGGTGAAAATGCCCCGCTGGGACTTGAGCAAATTCAATCGGGTGGAGAC
GCGCTTGGGGTCGTCAATGATCTCCGTGGGGGAGGTGATGGCGATCGGGA
GGAATTTCGAGGAGGCCATCCAAAAGGCAGTGAGGATGGTGAACCCCAAT
TTGGACGGGCTGGATGGAAAGTGCGATGTGGCGGCGAGTCTCGACAGCCA
GATGCAGATCCCTACTCCACATCGGCTTTTTGCCGTGCAGATGGCTTTGG
AACGTGGGTACAGCGTCGATGCCGTCCACGCCCTGACCAAAATCGACCGC
TGGTTTTTGTCGAAGCTGAAAAACATGGCCTTGATGAAAGCGGCAGCCTG
TAAGGCTTCATTGGACAGTCTAAACGCGGTCTCCATCCGCGCTTTGAAAT
GCCACGGGTATTCCGACCGACAAGTCGCCCGCTATGTGAATTCCACCGAA
GTGGTGGTGCGGCGCCGGCGGTTGCAGCTGGGGGTCCGCCCCTGCGTGAA
GCAGATCGACACGCTGGCCGCGGAGTTCCCTGCCCAAACCAACTATCTGT
ACATGACGTACAATGGCTCGGAGGATGACCTGGGCCCCGACGAGAACGGG
GTCATGGTCCTTGGATGCGGGCCATATTGCATTGGGAGCTCGGTGGAGTT
CGATTGGTGCGCCGTCTCGGCGGTGCGACAAATCAGGACCACAGGGATGC
GGGCGGTGGTGGTGAATTGCAACCCGGAGACGGTGTCGACGGATTACGAC
GAGAGCGACCGCCTCTTTTTCGAGGAATTGACCTTCGAGCGGGTCCTCGA
CATCTACGAACGGGAGAAGGCCGTAGGGATCATCGTCTCGGTGGGCGGGC
AAATTGCCAATAATCTGGCCAATCCCCTCTTCCAACAGGGCGTGAACATC
TTGGGCACCAGCCCCGTGGACATCGACCGGGCAGAAGACCGGCACCAGTT
TTCGGAATTGCTCGACTCGATCAGCGTCGATCAACCCTCCTGGCAAGAGC
TTTCCACAATCAGTGACGCCAAGAAATTCGCAAACGAAGTAGGGTACCCA
GTGCTGGTGCGTCCATCCTTTGTCCTGTCCGGTGCAGCTATGAATGTGGC
GGCCACACCTAGGCAGCTGGAGTCTTTCCTGCAGGAGGCGGCGGACGTGT
CGAAAGACAAACCGGTGGTGGTGACCAAGTTTATACTGAATGCAAAAGAG
ATCGAGTTCGATGCCGTGGCCAAGGCCGGAGACATCCTGAACTACGCGAT
TTCGGAGCATGTGGAAAATGCCGGGGTACATTCGGGCGATGCCACCTTGG
TGCTGCCCGCCCAAAAATTGTTCGTGGAGACCATCCGGAAGGTGAAGCGC
ATTTCGTCCGCGATCGCCAAGGCATTGAACATCACCGGGCCATTCAACAT
CCAATTGATGGCCAAGGACAACGACGTCAAGGTCATTGAGTGCAACTTGC
GGGCCTCGCGGACCTTCCCTTTCGTCTCCAAGGTCTTCGACGCGAACTTC
ATCACGCTCGCCACCCGTGCCATGCTCGGGGTCCCGACCAAGGCTTACAA
CATCTCCTTGATTGACATTGACTACGTGGCGGTCAAAGCTCCCATGTTCT
CCTTCACACGCCTCCGGGGCGCGGATCCTACCTTGGGCGTGGAGATGGCT
TCCACAGGCGAAGTGGCTTGCTTTGGGCACGATGTGCACGAGGCGTTCCT
GGCCGCGTTGATTGCTTCGGGGTTCCGGATGCCGATCAAGACGAAAAACG
TCCTCGTCTCCATAGCCGAGGAGACCGAACGTTTGGAGTTCCTCCCAGCG
GTCAGCGCCTTGCTGGAGTTGAACTACACGGTGCTGTGCACGCCCGGTAC
CGGTGAATTCTACGAGAGTCGGGGCTTGGAGGTGAAGATATTAAGCAAGA
AGGCGGGGGACAAGAAACACCCGTACGTGATCGACGCGATCAAGGACAAC
CAGGTCGACGTGGTGATCAACGTGCCGGAGGGAACGAAGAAAGACGAGGA
GGTGACGATTGGGTACGCCATGCGACGGTCCGCGGTGGATTTCGGGGTGC
CCCTGGTCACCAACATAAAGTGCGCGAATTTGCTCGTGGAAGCGCTGGCA
AGGCACAAGGGCATTAAAGTCCAGTCCGTCGAGTCCTTCTACCGCATCCC
AACAGTGGGATGGCAGAGGGAGAATGAGATCATGTAGAGAGATGGGCGGC
TGTGGTCGGTTGAAGCTGGCAGCGAGGGGTGTCCGAGCCATGGAAAGGCG
CGAAGGGCGTCAAAAGGACCGTGCGAAGGCGGGCGAGGATACTGGACACG
TGAGCATGCCAATCGTTGCTTTCGCGGGGGTATTGGATGGGCGATGCGAA
TCCGGAAATGGGTCCTTCTGGCGTTGAGGTGCGGAGGTGAATGGGCAAGA
CGAGCATTTTGCATGTATAGAACCTTTCCAAAAACCCGGGATGAGGATCA
ACAGCCCTCTGGCAAGGAGGATGCCGTCGTGCATGCCCGATATGAAATCA
AGTTTTTGCTGCGCACGTAGCTCTTGAGGGTTTCATCCATAGAGATTAGT
TGTTTTCTTGACCGGTGACGAGTGAGTCGGTGGGAAGAAAGCAAGAGAGC
AGAGATAGTGCCCTCGCTAAACAGTTTGCGTAAGAAGTGCATTGAATTAC
AAGAGGGAAAAGAACTACCCAGCACTTGGAATTGAGGTGGGAAAAGGAGC
CATTGATGAGGACCCAACCAACGCGGATAATTTTTTGGAACCGTTCCATG
TATGCTCCTCTTCCTTATCGCTTTGTCACTCATGGTCTCCGACTTCAGCC
TGCGGATAAACTTATGGCCCGATTTCTGTACAAAACAATTCAG back to topprotein sequence of rna1268 >rna1268-protein ID=rna1268-protein|Name=rna1268|organism=Nannochloropsis gaditana|type=polypeptide|length=221bp
MAPVGTETSSTITTSPAGSAKELRDIGHEAVWSLSTAKPGNGVEQIRDDD
MDTYWQSDGAQPHLINVQFHKKMTILEVSLYLDYSLDESYTPKKISIKAG
TTFHDLVEIQTVNLKEPQGWVKVPVRNPYADRPSGVDTVGDATAGDPVGG
VLRAFFLQISIIAMHQNGRDTHVRQVKVYGPRYSQASFCSHSRVEGIASL
DTYGTMPEFTSAELAQFSTVR back to topmRNA from alignment at CM002457.1:195606..197089- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1268 ID=rna1268|Name=rna1268|organism=Nannochloropsis gaditana|type=mRNA|length=1484bp|location=Sequence derived from alignment at CM002457.1:195606..197089- (Nannochloropsis gaditana)
GTGTTTGCAAGCTAGTAGCTGGCTTAGCGTGGCCTGATAATAACTCTCAC
CTGGTGCCTTACAATCCGTCAACAAGTGGTGAGCAGCCAGTTCTCGATGC
GATATGGCACCCGTCGGGACGGAAACCTCGTCGACCATAACGACGAGTCC
AGCTGGATCAGCAAAAGAATTACGCGACATCGGGCACGAGGCGGTGTGGT
CTCTCTCAACCGCAAAACCCGGCAATGGAGTCGAGCAAATCAGGGACGAC
GACATGGACACCTATTGGCAATCGGACGGGGCACAACCTCATTTAATCAA
CGTGCAATTTCACAAGAAAATGACCATCCTGGAGGTGTCTCTGTATCTTG
ATTATAGCTTGGACGAGTCGTACACACCGAAAAAAATAAGCATCAAAGCA
GGTACAACTTTCCATGACCTAGTGGAGATACAGACAGTGAATTTGAAGGA
ACCTCAGGGTTGGGTAAAAGTGCCGGTGCGCAATCCATACGCTGACAGAC
CGTCAGGGGTGGACACGGTTGGAGATGCGACTGCGGGCGATCCCGTGGGG
GGGGTGCTTCGGGCCTTCTTTTTGCAAATTAGTATCATTGCCATGCATCA
AAATGGCCGGGACACGCATGTCCGCCAAGTCAAAGTCTATGGTCCCCGGT
ACTCTCAGGCATCATTTTGTAGCCACAGTCGGGTAGAAGGCATCGCCAGC
CTGGATACATACGGTACAATGCCCGAATTTACCTCTGCAGAACTAGCGCA
ATTTTCGACTGTAAGATAAGCAAAGCTAGGTGAGCATAAAAGTGTTCGCA
AGTAGACAGGTCCATGGGCGGGAAAAAGACGACGCGTCCCATTTTTGTAG
GACCCGCTTCTTGTTTCCACAAAGGTTGTCCATGCGCTTGTGCTGCCGAG
CTCGAGCGCGCAATCTTGAAGGAAGATGAGGGCAAAGGGCTTTTCGGCTC
CACGTCTCTTCGGAAGAAGACTGGGGCTGTTCGCTCTCGAGCTCCGGAGC
TGTGGGACTCAAGAGATTCTTGACGTGATAGGAACCTCTTTTGCCCGAAC
TGTGCTCGACTGTCGTTCGAATCAAATCAATTATCGGGGTACACACGGAT
TTTTACGGCCCTCCCCCCCCTCTCTCCACCCGCGCGGGGAAGAAGATATG
ATCAGTGTCACAATAACTGTGGGGAGTTCGGTCGTCGTATTAGCATACTG
AATTGTTTTGTACAGAAATCGGGCCATAAGTTTATCCGCAGGCTGAAGTC
GGAGACCATGAGTGACAAAGCGATAAGGAAGAGGAGCATACATGGAACGG
TTCCAAAAAATTATCCGCGTTGGTTGGGTCCTCATCAATGGCTCCTTTTC
CCACCTCAATTCCAAGTGCTGGGTAGTTCTTTTCCCTCTTGTAATTCAAT
GCACTTCTTACGCAAACTGTTTAGCGAGGGCACTATCTCTGCTCTCTTGC
TTTCTTCCCACCGACTCACTCGTCACCGGTCAAG back to topCoding sequence (CDS) from alignment at CM002457.1:195606..197089- >rna1268 ID=rna1268|Name=rna1268|organism=Nannochloropsis gaditana|type=CDS|length=666bp|location=Sequence derived from alignment at CM002457.1:195606..197089- (Nannochloropsis gaditana)
ATGGCACCCGTCGGGACGGAAACCTCGTCGACCATAACGACGAGTCCAGC
TGGATCAGCAAAAGAATTACGCGACATCGGGCACGAGGCGGTGTGGTCTC
TCTCAACCGCAAAACCCGGCAATGGAGTCGAGCAAATCAGGGACGACGAC
ATGGACACCTATTGGCAATCGGACGGGGCACAACCTCATTTAATCAACGT
GCAATTTCACAAGAAAATGACCATCCTGGAGGTGTCTCTGTATCTTGATT
ATAGCTTGGACGAGTCGTACACACCGAAAAAAATAAGCATCAAAGCAGGT
ACAACTTTCCATGACCTAGTGGAGATACAGACAGTGAATTTGAAGGAACC
TCAGGGTTGGGTAAAAGTGCCGGTGCGCAATCCATACGCTGACAGACCGT
CAGGGGTGGACACGGTTGGAGATGCGACTGCGGGCGATCCCGTGGGGGGG
GTGCTTCGGGCCTTCTTTTTGCAAATTAGTATCATTGCCATGCATCAAAA
TGGCCGGGACACGCATGTCCGCCAAGTCAAAGTCTATGGTCCCCGGTACT
CTCAGGCATCATTTTGTAGCCACAGTCGGGTAGAAGGCATCGCCAGCCTG
GATACATACGGTACAATGCCCGAATTTACCTCTGCAGAACTAGCGCAATT
TTCGACTGTAAGATAA back to top
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