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Properties
| Property Name | Value |
|---|
| Product | BCP1 family |
| Orig transcript id | gnl|cribi|Naga_100042g32.5647.mrna |
| Orig protein id | gnl|cribi|Naga_100042g32.5647 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:178383..179993 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1263 ID=rna1263|Name=rna1263|organism=Nannochloropsis gaditana|type=mRNA|length=3467bp
TGCCTCCGTTCCATCTGGGGCCGGCTCCGCATCCTTGTGCGGCCGCTTTC
CGCACCCTTTCGGTGTCGAAGAGGTGCTCTTCGTCTTTTTCTTCATAGAG
TCAGCTGTAAATACGTTCGAGTATGTTTAATGAGGGAGGGACTGAAAGAG
ATATGTGGCAGGACGGAGCGCTCGTAGTATGGCGAGGCACATCGCCATCG
CAATCCGGAGTGTTCCAGCTGTAGAGGAAAATTGCAAACTACACAGCGAA
TGTGTCTGAAAGTGCTGCTCGAATCCTCCTTTGTAGATGATAAAAGATGT
CAGCAGTGCTTGATTGTGCGTCCATTCCAACGGAACTAATTTTATACCAA
CAAATTGCAACCTGTGCGTGTAGAGAGGGTTGCACGCGATATGCGACGAA
CGCCGGAATCAGTGCAGCCAGGAAAGTGAGACAAATCCGACACACAATTC
CGGGTTGCGGGCGTGATCATACTGCCTTTTCAAGCTCATGAGCAACAACG
GGGCCAATCATGGGCATTCTGTGGGAGTGGGCATCAAGGACGGCGGGGGT
TCCGGGGGGGGGGCGGCATGGGGGGGATTCGGAAAGGAGGAAACAGGGCT
GCGGGCAACAGCAACAATACAGGCAGCAGCAACATTGTACAGAATCTCAT
CAATAACAGCCGTCCGTCGGTACCTCCTCGTGACAACACCCCCCTGCTTG
GCATTGGGGCCACGGAGGCCTCTCTGAAATCGGACGGGAGCGGAGGAGGA
CACGGGAGTGGAGAGATAGCCCGGACCAATGGGGTGGGCTGGCGGGTGCA
TTTGAAGGGCACCGCCTGGCTCGTAGGCGTGGCGGTGGTGGTGGCCTTGG
GTCTTTTTGGCGTGCTGGCCTTGCGGCGATCGCGCGGCCACGACCCTGTG
CCTTTTGCCCACGTCTCCCATCCTTTGCAGCCTACGGCCCTGTGGGGTGC
GGTGCGAAAACCTTATCCGACAGGGGCCTGGTGGACGAACTTGGTTTTGA
ACAAGGGCGACAACAACGTGGCGGTCCTCCCGTACGCGGTCAAAGCCACA
GACACGGAGGGCCTTCAGGTGTCCTACTCCGCCTTCCGGCATCTGTCCAC
CGCCATGGTCATTGCGGATTTGTTCGCCCCGGACATGTCCCTGGCCACGG
TCGAAAACGCCACGACGCACTACGTGGAATCCTACGACCCTTTGAGCGTG
GGGCTGGTCTTTCCCACTGTCCTGCATTTGCAAGGGAATCGGCCGTCGTA
CTATCGTACCCACTTGGTCCGAGGGTGCCCCTATGTGACCGTGGAGTACT
ACGGGTGCCGACCTCGGGTCAAGGCGCCGAACATGATCACCGTCATCAAC
GGCTTGCTCTTCCGGGAAAACGCCACCTTCCAAGCCGCTGCTTTGACCGG
CTCGGTCTTCGATATCACCGTCATCAGCGGCCAGCACTGGATGCTCTTCG
CCGAGCCCCCCATCACCTTGGTCTGGACGATCGACGGCTCCCTTACCGCC
GTGGAGCCCTACACCGGCTTCCTGCGCGTGGCCGTGGCGCCGGTGGAGAA
AGTGAAGCCAGTCTTGGTCAAACACTGGCACACGTATCCCACAGGGGGGG
AGGTTTCTTTGGAGTACCCCGGGAGGGGGGGAGTGACCGGGGGGCGGGGA
AGCAGTGACAGTGACTTGATGATCACCTACCGGTGGCGACGGCGGGGGGA
AGGGCAGCTCTTGATGCTGGCCTTGCCCCATCATGTGGAGATTCTGCAGG
ACGCGGCTTTCTTGACGAATGCCACGGATGTTTTTCAGACCTTGAAAGGC
AGTATGACGGGGGTGGTGGGAGACAGATGGTACATGAAGGAAGGATTGCC
ACGTCCGTTGGATGCGAGCGATCCCACGAAGAAGAAGAAGAAGGTCACCC
GGAGTCATGCGGGGAGGGAACACATGTACGGCTTCCACGCGCCGAGGGGC
ATCCAGGACGAGAAGGCGTTGAAGGCCGTGCAGGGGGCGGTCTCGGAGGA
TTTGGCCGCCATCAAGAAGGGCGGCACGGAGCGATGGAACAAAACGGACA
AGAGCGACGCGTATTGGGCGGGGAAACGCATGGCCATGTACGCGCGCTTG
GCCCTGGTGGCGGAGGAGGTTGGGATGGAGAAGGAACGGAAAGAGGCCGT
CGCGCTGGCGGCCGCAGCCCTTGAACCTTGGTTAAAGGGCTCGAACAAGA
ACCCCCTCGTCTACGACACCACCTGGGGGGGCCTGGTGTTGCAGAGTGGG
TTGAGCGACCCCTACGTGAATTTCGGGAATACCTACTATAACGACCATCA
CTTCCAATACGGGTACTTTTGTTACTGCGCGGCCGTGCTGGCCCGTTTCG
ACCCGGCGTTCGTCAAGCGTCATAAAGGGGCTTTGCGGGCCCTGGTCGCC
GACATTGCCAACGACGACGACACCTCTCCTTCCTTTCCCCTTGCCCGGCA
CAAGGATTTCTTCGACGGGCATTCCTGGGCGAGCGGTCTCTTTGAGCAAA
ACAATGGCAAGTCGCAGGAGTCCTCCTCGGAAGCGATCAACGCCTATTAC
GGTGCACATTTGTACGGTCGGGCAACGGGCGATGTGAAGCTGGAAAATTT
TGCCAAGTTGCTCCTGGCCATGGAAATCCGCTCCACGCGTTGGTATTGGC
ACATGCAAAACAACACCAAAATCTACGACCCCATCTTTGCAGCGAATCGG
ATGGCGGGCGTGGTGGGGGGGCTGGACGCTACCTGCCACACCTGGTTCGG
GGCCAGCTTGGAATACGTGCATGGGATCAACATGATGCCCTTCACGCCGG
TGACGGAGGCCGTGTTGGACGCCAGTTTTGTCCGAGAAGAATACCCGGTC
CTGGCCAGCGTCTTGTCCCGGTCGGACGATCCCGTGGAGGAGGAATGGAA
AGGCTTCATTTACATGGACCACGCCGTCATCGATCCGGCTGCCGCCTGGA
CGGAAGTTGAGAGTTTGAAGCGGTATGATACCGGGAACAGTAAGAGCAAC
ACGCTATGGTGGGTGGCGACCCGTCCGGGCGCTGGAGGTGGGGACTCCAA
GTAGGGAAGGGGAAGAGCATGGGACGTTTATTACTCGTAGATGGAAGAAA
GCAGTCATGATTGAAAAAGTAAAACCTGTCGCCAGCCATTCAGTTGGACT
GGGGGGGGGGGACAAGGTTAGGTCACAGGGGCCAATGCGAAAAGGTGGAG
GGAAAGCAGTAGTCAACAGATGGAGTGTAGAGCAAAGACGAAGGGGCGTC
GAGCATGCGGTGGGGAAAAGGAGGAAGGCCAAGGACCACCCGTTCGTGTA
GGTTTCTGGATTGGGTGGTCGCGTGGGCGGAATTGAAGGGGAAAATGAGG
CTGTCGAGATAGTCAGAGAGGGATTCCTTTCTCAAAATGATGCATCTGTC
TTTCCCAGTAGGCCATCTCTTGGATCGACAAAAATGAAAAAAGGGCAACG
AAAACGAACCAATCAGA back to topprotein sequence of rna1263 >rna1263-protein ID=rna1263-protein|Name=rna1263|organism=Nannochloropsis gaditana|type=polypeptide|length=390bp
MKKKTKSTSSTPKGCGKRPHKDAEPAPDGTEAAELSLASSSSSSDDDYTE
DEIKLYGTGEVGSGSSSSSSSDEEDPKNSTTGGANSTISKNYKEKERSIK
EHEIKEENGKEVQVSFDVSDPEENFVFGIRSLLQWLEPEGVNVTSLADLI
VEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPP
TLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDA
TFPAIKNLITLSPCSVDLGRGNNKNGSSLPYAPNEAIYDRFEDELLVQAA
EMNYCFARAPPQEAKKKEKEPNSKHELMKDGESDVKVAVEVLKKRKRSSK
VGAKNDREGGESVAGQGVVISLIETKKLSECLRQMKEMVG back to topmRNA from alignment at CM002457.1:178383..179993+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1263 ID=rna1263|Name=rna1263|organism=Nannochloropsis gaditana|type=mRNA|length=1611bp|location=Sequence derived from alignment at CM002457.1:178383..179993+ (Nannochloropsis gaditana)
atgaagaaaaagacgaagaGCACCTCTTCGACACCGAAAGGGTGCGGAAA
GCGGCCGCACAAGGATGCGGAGCCGGCCCCAGATGGAACGGAGGCAGCAG
GTAAGGATGAGAAAACACAAGCCAACCCCCTGCGAATTCGCGCAAAGCTT
CGAGAATTGAAGTATTCACATTTTTTCACATTGTACATCCTTGAACAGAG
CTTTCATtggcctcttcttcttcttcctccgacgACGACTACACGGAGGA
CGAAATCAAGCTCTACGGGACAGGGGAGGTCGGTAGCGggagtagcagca
gcagtagtaGCGATGAAGAAGACCCAAAAAACTCCACTACTGGTGGCGCA
AATTCTACAATTTCTAAAAACTacaaagagaaggagaggtcgATAAAGGA
GCACGagatcaaggaggaaaacggcAAGGAAGTGCAAGTGAGCTTCGATG
TTTCCGACCCAGAGGAAAACTTCGTCTTTGGGATTCGCTCCCTGTTGCAG
TGGCTAGAGCCGGAGGTAAATGATAGACAAGGCGATTAATCCTTATGATA
CGCCCGAAAAAGGGTAAAAGAGTATAAGCTTGAAAGGATGGGATCCCATT
GTCGCGATGACCCATgctgcccccctcctgcgtccttttcccttttttcc
gcgCCATCATGCACTCCTCACATAGGGCGTGAATGTAACCTCGCTGGCAG
ACCTAATAGTCGAAGAGAAAGGGTTGGGAAGCATTATCCATTGTACGGCT
GAGACGGACGTCTTCGCCTTTGCCACCACTCTCAGCCTGGCCGCGCATCA
AAAGAATGAGGGGATACACAGCCTCTGCGACAAATTGTTGCGTCCCCGCT
GTCCACCTACATTGAAAAAGGCCTTGGAGCATGCCTTGGGGAGCCCGGAA
ACCTTTGTGTTCTTGCACGCCCGCTTCGTCAACCTACCTCTACCCTTGGT
GCCCGTCCTTCACTCGTCCAGCGAAGAGGACCGGGCGTGGGCACAATCCA
ATGATgtacggggaggggatgaggtcTCGTTGCTAGTTGAAATGGGTGTG
CGTGGCGcgtcttcctgtcctcctcgtccttctcgtctgTCCGCTCATAT
TTTTCGCTACACTGTCACAGGCAACGTTCCCAGCTATCAAGAACCTGATC
ACCCTAAGCCCTTGCTCAGTGGATCTGGGACGTGGAAACAATAAGAACGG
GTCCTCATTACCCTATGCACCGAATGAAGCAATATATGATCGCTTCGAAG
ACGAATTATTGGTGCAGGCCGCAGAGATGAATTACTGTTTCGCCCGTGCA
CCGCCTCAGGaggcgaaaaagaaagaaaaagaaccAAACAGCAAACACGA
ATTGATGAAAGATGGGGAGAGTGATGTGAAAGTGGCTGTTGAAGTGctca
aaaaaagaaagagaagtaGCAAGGTCGGCGCGAAAAATGATAGAGAGGGT
GGTGAAAGCGTGGCCGGTCAAGGGGTGGTGATTAGTCTCATTGAGACCAA
GAAACTATCGGAATGTCTTCGACAAATGAAAGAAATGGTGGGATAGGGAA
GCAAAACGTCATTCAAGGAACGGATGAAACTAAATAAAGCCCGATGCACC
GTCCATGCTGC back to topCoding sequence (CDS) from alignment at CM002457.1:178383..179993+ >rna1263 ID=rna1263|Name=rna1263|organism=Nannochloropsis gaditana|type=CDS|length=4692bp|location=Sequence derived from alignment at CM002457.1:178383..179993+ (Nannochloropsis gaditana)
atgaagaaaaagacgaagaGCACCTCTTCGACACCGAAAGGGTGCGGAAA
GCGGCCGCACAAGGATGCGGAGCCGGCCCCAGATGGAACGGAGGCAGCAG
AGCTTTCATtggcctcttcttcttcttcctccgacgACGACTACACGGAG
GACGAAATCAAGCTCTACGGGACAGGGGAGGTCGGTAGCGggagtagcag
cagcagtagtaGCGATGAAGAAGACCCAAAAAACTCCACTACTGGTGGCG
CAAATTCTACAATTTCTAAAAACTacaaagagaaggagaggtcgATAAAG
GAGCACGagatcaaggaggaaaacggcAAGGAAGTGCAAGTGAGCTTCGA
TGTTTCCGACCCAGAGGAAAACTTCGTCTTTGGGATTCGCTCCCTGTTGC
AGTGGCTAGAGCCGGAGGGCGTGAATGTAACCTCGCTGGCAGACCTAATA
GTCGAAGAGAAAGGGTTGGGAAGCATTATCCATTGTACGGCTGAGACGGA
CGTCTTCGCCTTTGCCACCACTCTCAGCCTGGCCGCGCATCAAAAGAATG
AGGGGATACACAGCCTCTGCGACAAATTGTTGCGTCCCCGCTGTCCACCT
ACATTGAAAAAGGCCTTGGAGCATGCCTTGGGGAGCCCGGAAACCTTTGT
GTTCTTGCACGCCCGCTTCGTCAACCTACCTCTACCCTTGGTGCCCGTCC
TTCACTCGTCCAGCGAAGAGGACCGGGCGTGGGCACAATCCAATGATGCA
ACGTTCCCAGCTATCAAGAACCTGATCACCCTAAGCCCTTGCTCAGTGGA
TCTGGGACGTGGAAACAATAAGAACGGGTCCTCATTACCCTATGCACCGA
ATGAAGCAATATATGATCGCTTCGAAGACGAATTATTGGTGCAGGCCGCA
GAGATGAATTACTGTTTCGCCCGTGCACCGCCTCAGGaggcgaaaaagaa
agaaaaagaaccAAACAGCAAACACGAATTGATGAAAGATGGGGAGAGTG
ATGTGAAAGTGGCTGTTGAAGTGctcaaaaaaagaaagagaagtaGCAAG
GTCGGCGCGAAAAATGATAGAGAGGGTGGTGAAAGCGTGGCCGGTCAAGG
GGTGGTGATTAGTCTCATTGAGACCAAGAAACTATCGGAATGTCTTCGAC
AAATGAAAGAAATGGTGGGATAGatgaagaaaaagacgaagaGCACCTCT
TCGACACCGAAAGGGTGCGGAAAGCGGCCGCACAAGGATGCGGAGCCGGC
CCCAGATGGAACGGAGGCAGCAGAGCTTTCATtggcctcttcttcttctt
cctccgacgACGACTACACGGAGGACGAAATCAAGCTCTACGGGACAGGG
GAGGTCGGTAGCGggagtagcagcagcagtagtaGCGATGAAGAAGACCC
AAAAAACTCCACTACTGGTGGCGCAAATTCTACAATTTCTAAAAACTaca
aagagaaggagaggtcgATAAAGGAGCACGagatcaaggaggaaaacggc
AAGGAAGTGCAAGTGAGCTTCGATGTTTCCGACCCAGAGGAAAACTTCGT
CTTTGGGATTCGCTCCCTGTTGCAGTGGCTAGAGCCGGAGGGCGTGAATG
TAACCTCGCTGGCAGACCTAATAGTCGAAGAGAAAGGGTTGGGAAGCATT
ATCCATTGTACGGCTGAGACGGACGTCTTCGCCTTTGCCACCACTCTCAG
CCTGGCCGCGCATCAAAAGAATGAGGGGATACACAGCCTCTGCGACAAAT
TGTTGCGTCCCCGCTGTCCACCTACATTGAAAAAGGCCTTGGAGCATGCC
TTGGGGAGCCCGGAAACCTTTGTGTTCTTGCACGCCCGCTTCGTCAACCT
ACCTCTACCCTTGGTGCCCGTCCTTCACTCGTCCAGCGAAGAGGACCGGG
CGTGGGCACAATCCAATGATGCAACGTTCCCAGCTATCAAGAACCTGATC
ACCCTAAGCCCTTGCTCAGTGGATCTGGGACGTGGAAACAATAAGAACGG
GTCCTCATTACCCTATGCACCGAATGAAGCAATATATGATCGCTTCGAAG
ACGAATTATTGGTGCAGGCCGCAGAGATGAATTACTGTTTCGCCCGTGCA
CCGCCTCAGGaggcgaaaaagaaagaaaaagaaccAAACAGCAAACACGA
ATTGATGAAAGATGGGGAGAGTGATGTGAAAGTGGCTGTTGAAGTGctca
aaaaaagaaagagaagtaGCAAGGTCGGCGCGAAAAATGATAGAGAGGGT
GGTGAAAGCGTGGCCGGTCAAGGGGTGGTGATTAGTCTCATTGAGACCAA
GAAACTATCGGAATGTCTTCGACAAATGAAAGAAATGGTGGGATAGatga
agaaaaagacgaagaGCACCTCTTCGACACCGAAAGGGTGCGGAAAGCGG
CCGCACAAGGATGCGGAGCCGGCCCCAGATGGAACGGAGGCAGCAGAGCT
TTCATtggcctcttcttcttcttcctccgacgACGACTACACGGAGGACG
AAATCAAGCTCTACGGGACAGGGGAGGTCGGTAGCGggagtagcagcagc
agtagtaGCGATGAAGAAGACCCAAAAAACTCCACTACTGGTGGCGCAAA
TTCTACAATTTCTAAAAACTacaaagagaaggagaggtcgATAAAGGAGC
ACGagatcaaggaggaaaacggcAAGGAAGTGCAAGTGAGCTTCGATGTT
TCCGACCCAGAGGAAAACTTCGTCTTTGGGATTCGCTCCCTGTTGCAGTG
GCTAGAGCCGGAGGGCGTGAATGTAACCTCGCTGGCAGACCTAATAGTCG
AAGAGAAAGGGTTGGGAAGCATTATCCATTGTACGGCTGAGACGGACGTC
TTCGCCTTTGCCACCACTCTCAGCCTGGCCGCGCATCAAAAGAATGAGGG
GATACACAGCCTCTGCGACAAATTGTTGCGTCCCCGCTGTCCACCTACAT
TGAAAAAGGCCTTGGAGCATGCCTTGGGGAGCCCGGAAACCTTTGTGTTC
TTGCACGCCCGCTTCGTCAACCTACCTCTACCCTTGGTGCCCGTCCTTCA
CTCGTCCAGCGAAGAGGACCGGGCGTGGGCACAATCCAATGATGCAACGT
TCCCAGCTATCAAGAACCTGATCACCCTAAGCCCTTGCTCAGTGGATCTG
GGACGTGGAAACAATAAGAACGGGTCCTCATTACCCTATGCACCGAATGA
AGCAATATATGATCGCTTCGAAGACGAATTATTGGTGCAGGCCGCAGAGA
TGAATTACTGTTTCGCCCGTGCACCGCCTCAGGaggcgaaaaagaaagaa
aaagaaccAAACAGCAAACACGAATTGATGAAAGATGGGGAGAGTGATGT
GAAAGTGGCTGTTGAAGTGctcaaaaaaagaaagagaagtaGCAAGGTCG
GCGCGAAAAATGATAGAGAGGGTGGTGAAAGCGTGGCCGGTCAAGGGGTG
GTGATTAGTCTCATTGAGACCAAGAAACTATCGGAATGTCTTCGACAAAT
GAAAGAAATGGTGGGATAGatgaagaaaaagacgaagaGCACCTCTTCGA
CACCGAAAGGGTGCGGAAAGCGGCCGCACAAGGATGCGGAGCCGGCCCCA
GATGGAACGGAGGCAGCAGAGCTTTCATtggcctcttcttcttcttcctc
cgacgACGACTACACGGAGGACGAAATCAAGCTCTACGGGACAGGGGAGG
TCGGTAGCGggagtagcagcagcagtagtaGCGATGAAGAAGACCCAAAA
AACTCCACTACTGGTGGCGCAAATTCTACAATTTCTAAAAACTacaaaga
gaaggagaggtcgATAAAGGAGCACGagatcaaggaggaaaacggcAAGG
AAGTGCAAGTGAGCTTCGATGTTTCCGACCCAGAGGAAAACTTCGTCTTT
GGGATTCGCTCCCTGTTGCAGTGGCTAGAGCCGGAGGGCGTGAATGTAAC
CTCGCTGGCAGACCTAATAGTCGAAGAGAAAGGGTTGGGAAGCATTATCC
ATTGTACGGCTGAGACGGACGTCTTCGCCTTTGCCACCACTCTCAGCCTG
GCCGCGCATCAAAAGAATGAGGGGATACACAGCCTCTGCGACAAATTGTT
GCGTCCCCGCTGTCCACCTACATTGAAAAAGGCCTTGGAGCATGCCTTGG
GGAGCCCGGAAACCTTTGTGTTCTTGCACGCCCGCTTCGTCAACCTACCT
CTACCCTTGGTGCCCGTCCTTCACTCGTCCAGCGAAGAGGACCGGGCGTG
GGCACAATCCAATGATGCAACGTTCCCAGCTATCAAGAACCTGATCACCC
TAAGCCCTTGCTCAGTGGATCTGGGACGTGGAAACAATAAGAACGGGTCC
TCATTACCCTATGCACCGAATGAAGCAATATATGATCGCTTCGAAGACGA
ATTATTGGTGCAGGCCGCAGAGATGAATTACTGTTTCGCCCGTGCACCGC
CTCAGGaggcgaaaaagaaagaaaaagaaccAAACAGCAAACACGAATTG
ATGAAAGATGGGGAGAGTGATGTGAAAGTGGCTGTTGAAGTGctcaaaaa
aagaaagagaagtaGCAAGGTCGGCGCGAAAAATGATAGAGAGGGTGGTG
AAAGCGTGGCCGGTCAAGGGGTGGTGATTAGTCTCATTGAGACCAAGAAA
CTATCGGAATGTCTTCGACAAATGAAAGAAATGGTGGGATAG back to top
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