EWM29400.1, cds1261 (CDS) Nannochloropsis gaditana

Overview
NameEWM29400.1
Unique Namecds1261
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:178383..178482 +
Alignment locationCM002457.1:178581..178897 +
Alignment locationCM002457.1:179058..179387 +
Alignment locationCM002457.1:179503..179928 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29400.1
ProductBCP1 family
Orig transcript idgnl|cribi|Naga_100042g32.5647.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:178383..178482 +
CM002457.1supercontigCM002457.1:178581..178897 +
CM002457.1supercontigCM002457.1:179058..179387 +
CM002457.1supercontigCM002457.1:179503..179928 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR025602BCP1_family
Homology
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|585111929|gb|EWM29400.1| (BCP1 family [Nannochloropsis gaditana])

HSP 1 Score: 798.119 bits (2060), Expect = 0.000e+0
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0
Query:    1 MKKKTKSTSSTPKGCGKRPHKDAEPAPDGTEAAELSLASSSSSSDDDYTEDEIKLYGTGEVGSGSSSSSSSDEEDPKNSTTGGANSTISKNYKEKERSIKEHEIKEENGKEVQVSFDVSDPEENFVFGIRSLLQWLEPEGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIKNLITLSPCSVDLGRGNNKNGSSLPYAPNEAIYDRFEDELLVQAAEMNYCFARAPPQEAKKKEKEPNSKHELMKDGESDVKVAVEVLKKRKRSSKVGAKNDREGGESVAGQGVVISLIETKKLSECLRQMKEMVG 390
            MKKKTKSTSSTPKGCGKRPHKDAEPAPDGTEAAELSLASSSSSSDDDYTEDEIKLYGTGEVGSGSSSSSSSDEEDPKNSTTGGANSTISKNYKEKERSIKEHEIKEENGKEVQVSFDVSDPEENFVFGIRSLLQWLEPEGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIKNLITLSPCSVDLGRGNNKNGSSLPYAPNEAIYDRFEDELLVQAAEMNYCFARAPPQEAKKKEKEPNSKHELMKDGESDVKVAVEVLKKRKRSSKVGAKNDREGGESVAGQGVVISLIETKKLSECLRQMKEMVG
Sbjct:    1 MKKKTKSTSSTPKGCGKRPHKDAEPAPDGTEAAELSLASSSSSSDDDYTEDEIKLYGTGEVGSGSSSSSSSDEEDPKNSTTGGANSTISKNYKEKERSIKEHEIKEENGKEVQVSFDVSDPEENFVFGIRSLLQWLEPEGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIKNLITLSPCSVDLGRGNNKNGSSLPYAPNEAIYDRFEDELLVQAAEMNYCFARAPPQEAKKKEKEPNSKHELMKDGESDVKVAVEVLKKRKRSSKVGAKNDREGGESVAGQGVVISLIETKKLSECLRQMKEMVG 390          
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|950885878|ref|XP_014525940.1| (hypothetical protein JH06_4093 [Blastocystis sp. subtype 4] >gi|902860551|gb|KNB42497.1| hypothetical protein JH06_4093 [Blastocystis sp. subtype 4])

HSP 1 Score: 100.138 bits (248), Expect = 3.186e-20
Identity = 64/204 (31.37%), Postives = 107/204 (52.45%), Query Frame = 0
Query:  112 VQVSFDVSDPEENFVFGIRSLLQWL---EPEGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIK--NLITLSPCSVDLGRGNNKNGS-SLPYAPNEAIYDRFEDELLVQAAEMNYCFARA 309
            + V F+ SDP+E     IR+  ++L     + V+ + LAD +V++  +GS++  + E DV+AF T L+L  ++ N+ I  +   +LR  CP  LK + E  L  P T + L+ R  N P  ++P L  S  ED  WA  N +T  A +   L+ ++PC  +      K+    L   P+  ++  FEDEL+ + A +++ F  A
Sbjct:   63 INVEFEFSDPKEEHFKSIRNFSRYLFLGTAKDVDFSPLADAVVKQVEVGSMVQVSGEDDVYAFLTLLNLQYYKDNQSIKDILS-ILRKNCPSELKDSFESFLSKP-TGLLLNERMRNFPPEVMPHLFESLGEDVKWALENSSTKEAFQYEYLLVIAPCFYEKTEPKRKSKKPKLNAGPDTCLFFHFEDELIKKYAALSFSFDVA 264          
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|698778713|ref|XP_009822400.1| (hypothetical protein H257_01078 [Aphanomyces astaci] >gi|574122061|gb|ETV87537.1| hypothetical protein H257_01078 [Aphanomyces astaci])

HSP 1 Score: 96.6709 bits (239), Expect = 3.330e-19
Identity = 58/162 (35.80%), Postives = 88/162 (54.32%), Query Frame = 0
Query:  100 KEHEIKEENGKE---VQVSFDVSDPEENFVFGIRSLL--QWLEPEGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIK 256
            +E  + + NG +   V V F  +DP E     ++ L+   +L P  ++ ++LAD+IV++  +GS++ C  ETDVF F T LSL  ++    I  +   L+  +CP  LK  L   L S    + L+ R +NLP  LVP LHS+ ++D  WA  N    PAIK
Sbjct:   24 EEDIVLKSNGDQKENVDVDFVFTDPCEQNFHSVKQLISNNFLPPTALDTSNLADIIVKQVSIGSMVCCEGETDVFGFITALSLKTYENTPSIRQI-HSLVLEKCPKDLKPRLTSILSSKTVGLVLNRRIINLPYQLVPHLHSALQQDIDWAVENSID-PAIK 183          
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|673015000|ref|XP_008861461.1| (hypothetical protein H310_00439 [Aphanomyces invadans] >gi|574483059|gb|ETW10050.1| hypothetical protein H310_00439 [Aphanomyces invadans])

HSP 1 Score: 95.9005 bits (237), Expect = 7.140e-19
Identity = 67/216 (31.02%), Postives = 113/216 (52.31%), Query Frame = 0
Query:  104 IKEENGKE---VQVSFDVSDP-EENFVFGIRSLL--QWLEPEGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIKN------LITLSPCSVDLGRGNNKNGSSLPYA-PNEAI--YDRFEDELLVQAAEMNY 304
            + + NG +   V + F  +DP EENF   ++ L+   +L P  ++ ++LA++IV +  +GS++ C  ETDVF F T LSL  +     I  + + L+  +CP  LK  L   L +    + ++ R +NLP  LVP LHS+ ++D  WA  N    PA+K+       + L+   VD+       G     + P+ A+  +D FE+E L   A++++
Sbjct:   28 VLKSNGDQKETVDIDFVFTDPCEENF-HSVKQLISTNFLPPTALDTSNLANIIVSQVSIGSMVCCEGETDVFGFITALSLKRYANEPSIRQI-ESLVLDKCPKDLKSRLTSILSTKTVGLVMNRRMINLPYQLVPHLHSALQQDIDWAIENTED-PAMKSSFKFDYFLILAGVQVDISSLKKPAGKKAKGSYPDPAVKSFDNFEEEFLEAQADLHF 240          
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|568050233|gb|ETM47188.1| (hypothetical protein L914_08087 [Phytophthora parasitica])

HSP 1 Score: 90.8929 bits (224), Expect = 6.355e-17
Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = 0
Query:  112 VQVSFDVSDPEENFVFGIRS-LLQWLEP-EGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIKN------LITLSPCSVDL-GRGNNKNG--SSLPYAPNEAIYDRFEDELLVQAAEMNYCF 306
            V V F  SDP E     ++  LL +L P +  +V+ LA+ IV +   G+++    E DV+ F T L+L        I  +   + + +CP      L+  L +    V L+ R VNLP  LVP LHS+  ED  WA  N+ T   ++N       + L+ C+ +  G   +K G  S   Y      +  FEDE L Q AE+++ F
Sbjct:   75 VSVDFLFSDPREAHFHSVKQFLLAYLPPTQPFDVSGLANAIVGQVTAGTMVCVEGEDDVYGFITALNLKGFANETSIQQILQYVTK-KCPSAELPKLQQILNTKNVGVVLNERMVNLPYQLVPALHSALHEDIEWAIQNEDT-EELRNSFKMDYFLILATCTEEKSGSSGSKQGKKSKTAYEQTAKFFHNFEDEFLEQEAELSFSF 278          
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|813134060|ref|XP_012198028.1| (hypothetical protein SPRG_04048 [Saprolegnia parasitica CBS 223.65] >gi|641537580|gb|KDO31433.1| hypothetical protein SPRG_04048 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 89.7373 bits (221), Expect = 9.626e-17
Identity = 65/206 (31.55%), Postives = 101/206 (49.03%), Query Frame = 0
Query:  112 VQVSFDVSDP-EENFVFGIRSLLQWLEPEGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIKN------LITLSPCSVDLGRGNNKNGSSLPYA----PNEAIYDRFEDELLVQAAEMNYCF 306
            V+V F  +DP E NF    + L+Q+L    ++ ++LA++IV +  +G+I+    ETD F   T LSL  ++    I  L   L+  +CP   K  L+  L +    + +  R +NLP  LVP +H + ++D  WA  N+AT P +KN       + L+   V+        G     A    P    YD FEDE L Q A++ + F
Sbjct:   35 VEVDFVFTDPCEANFHSVKQHLIQFLPASKLDASNLANIIVGQVTVGTIVCNEGETDAFGLITALSLKRYEAEPSIQQLM-SLVISKCPDATKPRLDQILSTSNVGLVISRRMINLPYQLVPHMHDALQKDIDWAIENEAT-PELKNSYKFDYFLMLAGVQVEKQAKKAPAGKKAKAAAYTDPAIKTYDNFEDEFLEQEADVAFSF 238          
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|325179623|emb|CCA14021.1| (BCCIP family protein putative [Albugo laibachii Nc14])

HSP 1 Score: 90.1225 bits (222), Expect = 1.379e-16
Identity = 62/212 (29.25%), Postives = 102/212 (48.11%), Query Frame = 0
Query:  105 KEENGKE--VQVSFDVSDPEENFVFGIRSLLQWLEPEGV--NVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWA-----QSNDATFPAIKNLITLSPCSVDLGRGNNKNGSSLP-YAPNEAIYDRFEDELLVQAAEMNYCF 306
            K ++G E  V V F  SDP++     I+ L+       +  +   LAD+IV++  +G+++  + E D + F T L+L  +++ + I  L    +R  CP   K   E  L + +  +FL+ R  NLP  L+P LHS+  +D  WA     QS    F      + L+ CS++      K  +    +A    +Y +FEDE L   A++ Y F
Sbjct:   65 KADSGNEDLVNVEFVFSDPKQCHYQSIKQLMSSCLSASLSLDTAELADIIVDQVEIGTVVCVSDEPDAYGFITVLNLRHYEERKCIQQLL-SYVRKHCPLDQKDEFEEMLKTKDVGLFLNERLFNLPYQLIPALHSALHQDIEWAISNSEQSRHKKF-HFDYFLVLTTCSIEQVNVERKARTKADNHAVQTKLYQKFEDEFLESQAQLMYSF 274          
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|566024541|gb|ETI47452.1| (hypothetical protein F443_08369 [Phytophthora parasitica P1569])

HSP 1 Score: 89.7373 bits (221), Expect = 1.808e-16
Identity = 64/206 (31.07%), Postives = 98/206 (47.57%), Query Frame = 0
Query:  112 VQVSFDVSDPEENFVFGIRS-LLQWLEP-EGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIKN------LITLSPCSVDL-GRGNNKNG--SSLPYAPNEAIYDRFEDELLVQAAEMNYCF 306
            V V F  SDP E     ++  LL +L P +  +V+ LA+ IV +   G+++    E DV+ F T L+L        I  +   + + +CP      L+  L +    + L+ R VNLP  LVP LHS+  ED  WA  N+ T   ++N       + L+ C+ +  G   +K G  S   Y      +  FEDE L Q AE+++ F
Sbjct:   75 VSVDFLFSDPREAHFHSVKQFLLAYLPPTQPFDVSGLANAIVGQVTAGTMVCVEGEDDVYGFITALNLKGFANETSIQQILQYVTK-KCPSAELPKLQQILNTKNVGLVLNERMVNLPYQLVPALHSALHEDIEWAIQNEDT-EELRNSFKMDYFLILATCTEEKSGSSGSKQGKKSKTAYEQTAKFFHNFEDEFLEQEAELSFSF 278          
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|568019783|gb|ETL93924.1| (hypothetical protein L917_08023 [Phytophthora parasitica] >gi|570986172|gb|ETP45274.1| hypothetical protein F442_08311 [Phytophthora parasitica P10297])

HSP 1 Score: 89.7373 bits (221), Expect = 1.826e-16
Identity = 64/206 (31.07%), Postives = 98/206 (47.57%), Query Frame = 0
Query:  112 VQVSFDVSDPEENFVFGIRS-LLQWLEP-EGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIKN------LITLSPCSVDL-GRGNNKNG--SSLPYAPNEAIYDRFEDELLVQAAEMNYCF 306
            V V F  SDP E     ++  LL +L P +  +V+ LA+ IV +   G+++    E DV+ F T L+L        I  +   + + +CP      L+  L +    + L+ R VNLP  LVP LHS+  ED  WA  N+ T   ++N       + L+ C+ +  G   +K G  S   Y      +  FEDE L Q AE+++ F
Sbjct:   75 VSVDFLFSDPREAHFHSVKQFLLAYLPPTQPFDVSGLANAIVGQVTAGTMVCVEGEDDVYGFITALNLKGFANETSIQQILQYVTK-KCPSAELPKLQQILNTKNVGLVLNERMVNLPYQLVPALHSALHEDIEWAIQNEDT-EELRNSFKMDYFLILATCTEEKSGSSGSKQGKKSKTAYEQTAKFFHNFEDEFLEQEAELSFSF 278          
BLAST of EWM29400.1 vs. NCBI_GenBank
Match: gi|567961837|gb|ETK87374.1| (hypothetical protein L915_08201 [Phytophthora parasitica] >gi|567990563|gb|ETL40791.1| hypothetical protein L916_08125 [Phytophthora parasitica] >gi|570951977|gb|ETP17234.1| hypothetical protein F441_08354 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 89.7373 bits (221), Expect = 1.844e-16
Identity = 64/206 (31.07%), Postives = 98/206 (47.57%), Query Frame = 0
Query:  112 VQVSFDVSDPEENFVFGIRS-LLQWLEP-EGVNVTSLADLIVEEKGLGSIIHCTAETDVFAFATTLSLAAHQKNEGIHSLCDKLLRPRCPPTLKKALEHALGSPETFVFLHARFVNLPLPLVPVLHSSSEEDRAWAQSNDATFPAIKN------LITLSPCSVDL-GRGNNKNG--SSLPYAPNEAIYDRFEDELLVQAAEMNYCF 306
            V V F  SDP E     ++  LL +L P +  +V+ LA+ IV +   G+++    E DV+ F T L+L        I  +   + + +CP      L+  L +    + L+ R VNLP  LVP LHS+  ED  WA  N+ T   ++N       + L+ C+ +  G   +K G  S   Y      +  FEDE L Q AE+++ F
Sbjct:   75 VSVDFLFSDPREAHFHSVKQFLLAYLPPTQPFDVSGLANAIVGQVTAGTMVCVEGEDDVYGFITALNLKGFANETSIQQILQYVTK-KCPSAELPKLQQILNTKNVGLVLNERMVNLPYQLVPALHSALHEDIEWAIQNEDT-EELRNSFKMDYFLILATCTEEKSGSSGSKQGKKSKTAYEQTAKFFHNFEDEFLEQEAELSFSF 278          
The following BLAST results are available for this feature:
BLAST of EWM29400.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111929|gb|EWM29400.1|0.000e+0100.00BCP1 family [Nannochloropsis gaditana][more]
gi|950885878|ref|XP_014525940.1|3.186e-2031.37hypothetical protein JH06_4093 [Blastocystis sp. s... [more]
gi|698778713|ref|XP_009822400.1|3.330e-1935.80hypothetical protein H257_01078 [Aphanomyces astac... [more]
gi|673015000|ref|XP_008861461.1|7.140e-1931.02hypothetical protein H310_00439 [Aphanomyces invad... [more]
gi|568050233|gb|ETM47188.1|6.355e-1731.55hypothetical protein L914_08087 [Phytophthora para... [more]
gi|813134060|ref|XP_012198028.1|9.626e-1731.55hypothetical protein SPRG_04048 [Saprolegnia paras... [more]
gi|325179623|emb|CCA14021.1|1.379e-1629.25BCCIP family protein putative [Albugo laibachii Nc... [more]
gi|566024541|gb|ETI47452.1|1.808e-1631.07hypothetical protein F443_08369 [Phytophthora para... [more]
gi|568019783|gb|ETL93924.1|1.826e-1631.07hypothetical protein L917_08023 [Phytophthora para... [more]
gi|567961837|gb|ETK87374.1|1.844e-1631.07hypothetical protein L915_08201 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1263rna1263Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications