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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100042g38.5650.mrna |
| Orig protein id | gnl|cribi|Naga_100042g38.5650 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:167690..168701 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1258 ID=rna1258|Name=rna1258|organism=Nannochloropsis gaditana|type=mRNA|length=5732bp
TACACTTTTCTTGCCCTCTCTCGGGCGTGGCGATTGCTCAAACAGTTTTG
TAATCGTATGATTTACAGGAAGTCTTTTAAAGGGTGGTCTGAGCGACAAC
AATTAAACTTGCTTGGGGAAGCTCTTGCTAGCCACGATAGCGATGGCCAC
TCCAACGTCGACACGTACGGTTTTAGAAGCAGTCCGTAAACTAGCCGGAA
GCCTCCGCATAAATTCCAGCCTTGCAACAGCAGCTCATACGAGTGACTGC
TTGGACGCGGCGGAGTTCTTGATGCTTGCCGTGGGGTCACATGGTGATGA
ACATGCAGCAGGGCTCGTCCTACAGTGGGCTGTTGCCATGTTGACGGGAA
GAAATCGGCAGAAACGATCACTCGCACCGCAGCCCCAAACTCCAGATTCC
CCGACAGGGATTGAAAGCGATGGAAGAGCTTGGCGCCTGTGTGCAAATGC
CGTGTCTGTCCCTTTGTCGAAGTCCATCACCACTACGCTTTCGCAACACG
CATCGCTGGGATTGTTACAAGCCGCTGTTACCACAGTCTTTCGTCCTTCT
ACCCCAAGCTCTGCGGCCGTTGCGGCCGTCTCTTTAGTCAGTGCATTGCT
TGGACGAGGATTGCCCCAGGTGCCGGCAGACAAGGTGCTGGAATTGGCGG
CGGACATAGTTGAAAACTTATGCTTAATTTATCAACGGCAGCGACTCCAG
CATCACGCGCAAGACAACAAGAGCAGGCTTGAGCAACAACTTGTTGCCAA
CGACCTCATGTCAGCAAGGAATGCGTTGTGCGTCGTGGTCTTGCAGTACC
TGGTGGCGGTGCAAAGGCAGCAAGCCAGCCAAAGGAAAGCTTTTCAGATC
CTAGTAGGTCGGATGGTGCAGCCGTTACTCACTCTTCATTCCCACTTACG
AGGTGTTTCCCGGGGAGGCATCAGAAAGAGGGAAGATAAGGGTCAGAATG
ACGTGCGAAAGGGGGGATTTTCACTCCGCCAGGCCATCGACGCGGTGCTG
GGTGAACTCTTGTTCCATCGCGAGCATGTGGAGGCCCTCAGGGTACTGCT
TGCCTCCAGAATTACAACCAAGGCCGGTGCTAACACCGCCGGCGGGAGTA
AGAAACGACAGCGTGGATCGTCTCCGGCAAGTGCAGGTGGGGGAGAGGGG
AAAAATGAAGAAACAAGCGCCTGGATGTGCCAAGGAGCCGCGGCAGCAGG
ATCATGGACCGCATATCAGGGGATACTCCTGCAAGCACTGCATCGATGGG
CCAACGAGGAGGAAGACGAAAGCCTGAAGGAGAGCATTGTCCATTCGTTC
GAGCACTTGTTCCGTCTTTTTGTCTGGCGCCTGGTGGCCGTCAATGCGCT
CTCTGCGACGGCAGCGACCCAGCTCAGCGAGGCAGACGGAGGAGAAGGAG
CGGATGGAGGGACGGAGACGAGGGACATGAACGCTGTTGCCTCCATTCTG
GGGTCAAAACGGAAAGAAGAAGTGGTGGCTTCTGCTGCTACTTCCTCCCC
TCTTGTTTCACGCCCGTCCTTCATGTTTGGCGTAAAATTGTGGCTTGTTC
TAGTACCTATGGCTTCCCCCACGACCTCCGGGCTCCCACATGCTACTTCA
ATCCGCGAGGCAGGGCGATCAGCGGAAGCGCTGTCTCCAGAAACACGTTC
CTACCGACTTGTAGCCGGGAGGCGGGTTTTAGAAGCGATGCTCACGTTGA
ATGTGTATCACTACGAGGCAGATTGCTCGCCCGATGGTCAGTTTCAGATT
CTCAAATCCATGTTTTCAGCCCTGCTAGGGCGAGAGGAGGGACACGGGGA
GTCCAAGGATCGCAAAACGGAAAGCGCGGGCAACGGAGTGATGGTCAACA
TGCTTGTGGAAAATTTGCGGTGTTTGGCGACGATGCTCCGGATCGATCAC
CGTCTGGCGGAGGGTCAATTATCGGAGCTCGTCAGCTTGCTCACGCGGCT
TTATGCGGTTGCTTCCACGTCTGCAGTCTCCATCGATCGTCGAAAGATGT
CCGACGAGGTGATGGGGGGGAGCGAGGCCGACGAGCATGGATCCTTGCCT
GTGGAGGGGAGGATGGTGGGGGAAGCGGAGCAGGACAGAGTCTCGGCAAG
GAATGCCCTCCGCCAGGTCTGTGTACGCGTCATCGTCGAGACGATTGGGA
CATTCGCCCGACTTCGAAACGTCGACTTGCTAGTGCAAGCCGTGTTTTCG
ATGGAAGTAGCCCAGGACATGGCTGTGACGGCCCTAATCAGTTGTCCTGA
AGTAGCAAGTGCGGTAGGAAGCGCGTTGCGGGAGAGCCCCCCCCCCCCAG
TTGATCCCTCTCTGGGATTTGATATCGAAAAGATCTGCCCTTTTTTCTGC
CTCCGTCTTGAACTATGACTCCGAATTGGAGCGGAAGACAACTGCCGCGG
GGGAAGGAAAGGAGGCGCCGGAGATGGCCGTGTCCCTTCGTCTGGGACGG
CCCGGGGTCCGCTCTAAGCTATTGGGCCTTTTGTTGGAGAACATGCAGGT
GTCGGCGGCGAATGCTTTCGCACTAAAGGGTCGCATAAATGGAATACTGG
CCCATTTGAGGAGGTTGGTTCTTGACGAGCTGCGGGAGGGGACGTCGGGG
GAGCCGTCGCCTGGGACACTGAGGGGAAAAGGGCGGAGAGGGCCTCGGGA
TTCGGACGCGATCCCAGGTCCGTCTACGGTGAGGGTAGCTTTAACATTGT
ACGCCCATCTCTTGGAGCTGGATCTTTTGTGCGATTTTTGGGTCGAAAGC
TCTGACGACACAAGTCGCAGTAGCAGCAGTGACCGGGATACGGAGCCGTC
GTCCAGGACGTTCTCCACCCATGGTTCTTTCGTGAAAGCGGTCGTGAAGC
ATATTTCCTCCCTTGTTGGCTGCAGGAAAGTAGTGGACATGCTGGTTGTG
AGCAGGCTTTACCAGCTCTTGGTAGAAAAGGGGGGGCCGCCCGATGGTTG
GGGCAGGGAGAGCGCCTTAGCCCTTGGGGAGCACGTGGAGGACAAGGAGG
AGCGGGACCTTGTTGCATGTCTCTTCCAAGCCCAGCCAGGAAACGGGGAT
CAAACAATAGGAGATGACGGCAACGCCGGGAACAGGGACGGTTGGCAGCG
CAACTTGGCGATTCTGGGCCCCAGCTTGCCGTTGTGGGCGTGGTATTGCG
GGAAGGAGCATTTAGACACCTTCTGGCACAGCATTTTCTCCGACTCGTAC
AGTGCTACACGGAATTTAACGTCGTGTCACAGCCGTCCTTCCATCCGCTT
GTTGACAGATGCCAGCTTCTACGAGATTTCTCCGCTGGCTTGTCGGTGCA
TCCCCGCGTGGTCTTTTTATGTGTGGGAGTCACTTGCATCCATGCGACCG
GGATCAACACCAAAAAAAGGCTTGCAGCAATTGAAAGGGTGGATGGAGCG
GGGGGGCGTCACGTCTCTGGCGATGGCAACCGAGTACGCGTGTTTTTTGT
CAGCGCCGACCTCAGTAGGGAAGACAAAGCGTGCAACGAGTCCTGTGGAG
AAGGAGAGGAATCCTTTTGTCAAGGAGTGGGTAAAATATACGCAAGACGA
TTCCAACGAATCCCTTGCTAGAGCTGTGCACCTTTGTCGGCTTCTAAACA
GCTTGCCGTCCGAATACCTGCCCTCCGAGCAGGCCCCGTTGCGCTTTCTC
TTCTCTGTGTTTATTTCCTGCGGGATCACGCGCAATCCGACAAGTACTGG
CAGGCACATTTTGGCCTTAGCACTCGCTACGTCCGCCACCCAAGCCCTGC
AATCATCACCTCAGGAGATTTTTCCCTTGATTAACAACTCCACGCACATT
TTTGAGCAGTGGTTCCTGCCTGTTGTCCTCTCAAGGTCTGCACCATCCTT
GTCATCTTCCTCCGTTCCCTCCTCGGCCGGCGACGAGGTCGGTCTAAGCC
TTTTGAAGAACTACATCGCTTCTTTTCTTCTGAGGCCAGGCAACGTTCCA
ACAGAAGGAGGAATGCATGTAAACGGGGCAAAGGGGCAGGGGCAAGAGAA
AGCTATGACCCGGCTAGTAAGCTGCCTTCTCAAGGATAAGCTGTTGCCTT
TGTTGGAGAAGCATCCCGGCTCAAATGGGAGTGATGATGACAGCGACTTA
GCACATGCTTTGCGTCTGATCCAAGCGCTTCTTGCTCCCTATCTTAGCAA
GGAGGGGATGGACGCATCGATGGAGGGAATCGATGGTCGGGAAGACATAT
TGAACCTGGCGGCGAGCCGGCTTGGTCCTGCCGCGGCACGGCATTTGCCT
TTTTCTGCATCTTCGGAGGTTTTTTTAGTCCTGGCGGACCTCATGAAATT
GGTAGGGCAAAATACCTCCGAGGGCGATGCGTTGACTCCCGCCGGGGCGA
GACGACAGGGGTCCTTCAAGTTACCTTCTCACACAGTACTCCAGGTACTC
AAACCGGGCAAAACGGGGAATATGTGCACTCGAGCCTCGAGCCTCAAACT
CGTGGCGGCGTACTTACAATACGGTATGCGAGAAGAGGATTTTGCCCAAG
AAGGGGCCATATTGGAGGCGATGGTCGATTTCGCCATGCATGTTCCCTCT
GCCTCCAAGACTCCGGCCACGGCTTTTGAGGCCCGGCAAGCCCATTTTCT
GGCAACAGCCATCGAAAATACCCGTGGAGGCTCCTCCGTACAGGGACAGG
CATTGCATCGGCTCATTGATTGCATGTATGCAGCCCAGGAGGCATTCTTG
AGTCGACCAGCGGGCAGGTCTAGGGCAGCGGTCACGGACACGTTAAGGCG
CGCCTGTTGCTTTTTCGAGCGTCTGGTCGAAGCAGCGGATTCAAGAGAGG
GCCCCGCAGTAGAGGCAATACGTCTGGTTGCCCAAGACTTTCTGGGGCTT
GCGTCGTCGCTCGTAACGGTATTGATGACCCGCCTCCTCGACCGTGAAGC
GCCTCCGGCCTCTAACCTACTCTCACAGAGCGAGCTCGATGCCTGTCTCT
CCAAGGTCCTGGGCGTCTTGCGGCTCTTCGTGCGGAAACGCTGGCTCTTC
CCCTCGGGGTCAGGCATGCGTGTCGAGGACGTCGGTCGCATCCTCGCACC
GGTGTCGGCCCTCATCCCAGTCATGCACCGCGTCGGGGGAAAGACAGGGG
AGCAGCTCGACGAGGTGCCGCCTGCCGAGGGCCCTTTCGCAGGTATTTGC
AACCTTCTTTCAACACTGCTCAAACTGCATCCTCGGCTTGTGAGCCAGAG
TGCTCCTCCTTTCTTCCTGGTCGCACGCGCTCTGTTTCGTCTGCTCGTCG
TCAAAAAGACGTCTGGAAATGGTCCATATGGAGAGCTAGGGGCCGTCAAA
GCATGGGTGCGGCTCATTGAGCACATAGCAGGCCAAGCTACGCTTTTGCG
GAAGCATCTGATGATGTTGCTGGTGGATTATTTGTCGGTCTACCCTTACC
TAGGGGTGGAGGACAAGGAAGTTTTGCAGACCGGGGCATTCGCCCTGATT
GATGCGCTCAACTCGTCTGAGGTGCAGCACATGAATGCCGCTCTTTTGGA
CCCAGTAGGACAGGCCTTGCTGAAAAAGCTGTACAGTGAGTACCAACAGC
AGTATAAGTTCCGGGGGAAGGTATAGCTATAGTCGTGTACAAGACAGGAT
GAAAGCAAGTGTTGCGTCTTTTCTTTTCTGGCGGCTTTTATTCGACGATT
CTTTTAAAATGCGAGTTTCGAGTCATATTTTCTATAATCGTAGCAAAACA
GCTTACTCTGAAAAAGAATATTTAGCGTTGAT back to topprotein sequence of rna1258 >rna1258-protein ID=rna1258-protein|Name=rna1258|organism=Nannochloropsis gaditana|type=polypeptide|length=251bp
MRVRGLEPGSFFQGLVLLSAASQAGRPFAQSPICPLSREKSHFPAFCSPY
SSQSCPWIITQRGGAVNHDNDTREGLLLPTPAFKAAEETWKTPQGVQWTQ
LLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCY
GNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYR
GVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTLSGQASENAF
K back to topmRNA from alignment at CM002457.1:167690..168701- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1258 ID=rna1258|Name=rna1258|organism=Nannochloropsis gaditana|type=mRNA|length=1012bp|location=Sequence derived from alignment at CM002457.1:167690..168701- (Nannochloropsis gaditana)
TGTCCGAAAAAGGCAGCTGAAGAAACGCACACATTTCTCACTCTTCGGAA
GCGAGCATGCAATGATGCCCTCGGTCTATCAATACTCACTTGCTCAATAA
TTCTGACTGTTTTTTATCAACAGGCCACAATGAGGGTCAGAGGCCTCGAG
CCGGGTAGCTTTTTCCAAGGACTCGTCCTTCTCAGTGCCGCGAGTCAGGC
AGGCAGACCTTTTGCCCAATCGCCTATCTGCCCTCTATCCCGAGAAAAAT
CACATTTTCCTGCCTTTTGTTCACCTTACTCGTCGCAGTCATGTCCGTGG
ATCATCACTCAGGTATCAAGGTGGCAACTTTTGTACAAAATGTTCTTTAT
CAGCCGACTCTAATCCAGCTTTTGCCACATCCAGCGAGGTGGCGCCGTCA
ACCATGATAACGATACAAGAGAGGGATTGCTCCTTCCAACGCCTGCATTT
AAGGCAGCTGAAGAGACTTGGAAGACTCCGCAGGGAGTGCAGTGGACGCA
ACTCCTTCTCGATTCTTTCGAGAAAACCACTGGTTCATTCCTCCTTTCCA
ACCGCGACACGCTAGACGCAGCAGAGCAAGCGAGAGCGCTTTTCTTCTCC
TCCCGGGTCATTGTCTCGCATCAGACACAACAGGATCCAGTGTTGTGCTA
CGGTAATGAGAAAGCATTGGCGTTGTGGGAAATGGATTTGGAAACCTTGA
CCTCCTCTCCATCACGATACACGGCGGAGCCAGTTGCGCGAGAAGAACGG
CAGCGTCTGCTCGATGAAGTTAGGTCAAAAGGATACATAGACGACTATCG
TGGTGTACGAATATCATCCACGGGAAGCCGTTTCGAAATAGTGAAGGCGA
TAGTTTGGGAAGTGTATGATACACTGGGAGTAAGGAGGGGTCAAGCAGCG
ACTTTTTCTGAATGGAGGACTTTGTCAGGACAGGCCTCTGAGAACGCGTT
TAAATGAAACAAAGCCACTTTCGTTGATCAATGTCACATTGTTTATTTCT
TGCTTTGGTTCG back to topCoding sequence (CDS) from alignment at CM002457.1:167690..168701- >rna1258 ID=rna1258|Name=rna1258|organism=Nannochloropsis gaditana|type=CDS|length=1512bp|location=Sequence derived from alignment at CM002457.1:167690..168701- (Nannochloropsis gaditana)
CGAGGTGGCGCCGTCAACCATGATAACGATACAAGAGAGGGATTGCTCCT
TCCAACGCCTGCATTTAAGGCAGCTGAAGAGACTTGGAAGACTCCGCAGG
GAGTGCAGTGGACGCAACTCCTTCTCGATTCTTTCGAGAAAACCACTGGT
TCATTCCTCCTTTCCAACCGCGACACGCTAGACGCAGCAGAGCAAGCGAG
AGCGCTTTTCTTCTCCTCCCGGGTCATTGTCTCGCATCAGACACAACAGG
ATCCAGTGTTGTGCTACGGTAATGAGAAAGCATTGGCGTTGTGGGAAATG
GATTTGGAAACCTTGACCTCCTCTCCATCACGATACACGGCGGAGCCAGT
TGCGCGAGAAGAACGGCAGCGTCTGCTCGATGAAGTTAGGTCAAAAGGAT
ACATAGACGACTATCGTGGTGTACGAATATCATCCACGGGAAGCCGTTTC
GAAATAGTGAAGGCGATAGTTTGGGAAGTGTATGATACACTGGGAGTAAG
GAGGGGTCAAGCAGCGACTTTTTCTGAATGGAGGACTTTGTCAGGACAGG
CCTCTGAGAACGCGTTTAAATGAATGAGGGTCAGAGGCCTCGAGCCGGGT
AGCTTTTTCCAAGGACTCGTCCTTCTCAGTGCCGCGAGTCAGGCAGGCAG
ACCTTTTGCCCAATCGCCTATCTGCCCTCTATCCCGAGAAAAATCACATT
TTCCTGCCTTTTGTTCACCTTACTCGTCGCAGTCATGTCCGTGGATCATC
ACTCAGCGAGGTGGCGCCGTCAACCATGATAACGATACAAGAGAGGGATT
GCTCCTTCCAACGCCTGCATTTAAGGCAGCTGAAGAGACTTGGAAGACTC
CGCAGGGAGTGCAGTGGACGCAACTCCTTCTCGATTCTTTCGAGAAAACC
ACTGGTTCATTCCTCCTTTCCAACCGCGACACGCTAGACGCAGCAGAGCA
AGCGAGAGCGCTTTTCTTCTCCTCCCGGGTCATTGTCTCGCATCAGACAC
AACAGGATCCAGTGTTGTGCTACGGTAATGAGAAAGCATTGGCGTTGTGG
GAAATGGATTTGGAAACCTTGACCTCCTCTCCATCACGATACACGGCGGA
GCCAGTTGCGCGAGAAGAACGGCAGCGTCTGCTCGATGAAGTTAGGTCAA
AAGGATACATAGACGACTATCGTGGTGTACGAATATCATCCACGGGAAGC
CGTTTCGAAATAGTGAAGGCGATAGTTTGGGAAGTGTATGATACACTGGG
AGTAAGGAGGGGTCAAGCAGCGACTTTTTCTGAATGGAGGACTTTGTCAG
GACAGGCCTCTGAGAACGCGTTTAAATGAATGAGGGTCAGAGGCCTCGAG
CCGGGTAGCTTTTTCCAAGGACTCGTCCTTCTCAGTGCCGCGAGTCAGGC
AGGCAGACCTTTTGCCCAATCGCCTATCTGCCCTCTATCCCGAGAAAAAT
CACATTTTCCTGCCTTTTGTTCACCTTACTCGTCGCAGTCATGTCCGTGG
ATCATCACTCAG back to top
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