EWM29403.1, cds1256 (CDS) Nannochloropsis gaditana

Overview
NameEWM29403.1
Unique Namecds1256
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:168390..168572 -
Alignment locationCM002457.1:167745..168317 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29403.1
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100042g38.5650.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:168390..168572 -
CM002457.1supercontigCM002457.1:167745..168317 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR013978MEKHLA
Homology
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|585111932|gb|EWM29403.1| (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 517.694 bits (1332), Expect = 0.000e+0
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
Query:    1 MRVRGLEPGSFFQGLVLLSAASQAGRPFAQSPICPLSREKSHFPAFCSPYSSQSCPWIITQRGGAVNHDNDTREGLLLPTPAFKAAEETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTLSGQASENAFK 251
            MRVRGLEPGSFFQGLVLLSAASQAGRPFAQSPICPLSREKSHFPAFCSPYSSQSCPWIITQRGGAVNHDNDTREGLLLPTPAFKAAEETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTLSGQASENAFK
Sbjct:    1 MRVRGLEPGSFFQGLVLLSAASQAGRPFAQSPICPLSREKSHFPAFCSPYSSQSCPWIITQRGGAVNHDNDTREGLLLPTPAFKAAEETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTLSGQASENAFK 251          
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|1099562789|emb|SFI68712.1| (MEKHLA domain-containing protein [Planctomicrobium piriforme])

HSP 1 Score: 176.407 bits (446), Expect = 2.383e-52
Identity = 91/160 (56.88%), Postives = 110/160 (68.75%), Query Frame = 0
Query:   86 AEETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTLSGQA 245
            +++ W+TPQ +  TQLLL S+ +   + L+   +T    EQAR LF S  VIVSH TQ DPVL YGN+ AL LWEMDL TLTS+PSRYTAEP+ R+ER RLL+     GY+DDY G+RISSTG RF I +AIVW + D  G  RGQAATFS W  L   A
Sbjct:    2 SDQPWQTPQCISHTQLLLKSYRRWLKTDLIPRTET--PLEQARLLFESPFVIVSHGTQPDPVLNYGNQTALMLWEMDLPTLTSTPSRYTAEPLHRDERARLLERTTRDGYVDDYSGIRISSTGKRFRIAQAIVWNLVDDAGEYRGQAATFSSWEPLPPTA 159          
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|493576442|ref|WP_006529571.1| (MEKHLA domain-containing protein [Gloeocapsa sp. PCC 73106] >gi|442787880|gb|ELR97590.1| MEKHLA domain-containing protein [Gloeocapsa sp. PCC 73106])

HSP 1 Score: 167.548 bits (423), Expect = 6.390e-49
Identity = 81/155 (52.26%), Postives = 106/155 (68.39%), Query Frame = 0
Query:   87 EETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTL 241
            E  WK PQ +QW+Q LL+S+EK  G  L+      D   +A  LF++  V+VSH +  DP+L YGN+ AL LWEMD E  T +PSRYTAEPV +EERQR+L     +G+ID+++GVRIS TG RF + KAI+W + DT G   GQAATFS+W+ L
Sbjct:    3 EVIWKQPQVIQWSQCLLNSYEKYLGKELIVRNG--DPVAEAEFLFYAPFVLVSHNSDTDPILNYGNQVALELWEMDWEEFTQTPSRYTAEPVNQEERQRMLSLATQQGFIDNFQGVRISRTGKRFVLEKAIIWNIVDTEGQACGQAATFSDWKML 155          
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|1094439365|emb|SEM72824.1| (MEKHLA domain-containing protein [Nitrosomonas marina])

HSP 1 Score: 166.007 bits (419), Expect = 2.713e-48
Identity = 83/157 (52.87%), Postives = 106/157 (67.52%), Query Frame = 0
Query:   85 AAEETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTL 241
            + +  WK+PQ ++W Q LLDS+   TG  L+  + T    EQA  LF  S V+VSHQ ++DP+L YGN+ AL LWEMD    T +PSR TAEPV REER R+L + R+ GYI DYRGVRISSTG RF + +AIVW + ++ G+  GQ ATFS W  L
Sbjct:    2 STQTDWKSPQMLRWCQYLLDSYAYWTGKELIPRKGT--TYEQASYLFNCSFVVVSHQAREDPILNYGNQTALNLWEMDWCQFTKTPSRMTAEPVNREERARVLQQARTHGYIADYRGVRISSTGKRFLVDQAIVWNILNSDGITIGQGATFSIWHFL 156          
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|1094452145|emb|SET08875.1| (MEKHLA domain-containing protein [Nitrosomonas marina])

HSP 1 Score: 163.696 bits (413), Expect = 2.255e-47
Identity = 84/157 (53.50%), Postives = 106/157 (67.52%), Query Frame = 0
Query:   85 AAEETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTL 241
            + +  WK+PQ ++W Q LLDS+   T   L+  + T    EQA  LF  S V+VSHQT++DPVL YGN+ AL LWEMD    T +PSR TAEPV REER R+L + R++GYI DYRGVRISSTG RF + +A+VW + +  G   GQ ATFS WR L
Sbjct:    2 STQTDWKSPQMLRWCQYLLDSYAYWTRQELIPRKGT--TYEQASYLFNCSFVVVSHQTREDPVLNYGNQAALNLWEMDWRQFTRTPSRMTAEPVNREERARVLQQARTQGYIADYRGVRISSTGKRFLVDQAVVWNILNPDGNTIGQGATFSVWRFL 156          
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|1064039337|gb|ODT43574.1| (MEKHLA domain-containing protein [Nitrospira sp. SCN 59-13])

HSP 1 Score: 159.458 bits (402), Expect = 7.878e-46
Identity = 80/154 (51.95%), Postives = 104/154 (67.53%), Query Frame = 0
Query:   88 ETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTL 241
            + W+ P+ V+W+Q LLDS+    G  L+      +A  QA+ALF +  V+VSH TQ DP+L YG++ AL LWEM  E L  +PSR TAEPV R ER+ +L+  R +GYID+YRG+RIS++G RF I  AIVW V D  G R+GQAATFS W  L
Sbjct:    2 QVWQRPEVVEWSQWLLDSYRHCVGRELMERVGGGEA--QAQALFTAPMVVVSHGTQDDPILNYGSQLALTLWEMTWEQLVQTPSRLTAEPVNRTERESMLERARVQGYIDNYRGIRISNSGRRFLIEHAIVWNVVDRAGYRQGQAATFSRWTFL 153          
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|1085509376|gb|OGW69605.1| (MEKHLA domain-containing protein [Nitrospirae bacterium RIFCSPLOWO2_01_FULL_62_17])

HSP 1 Score: 158.688 bits (400), Expect = 1.764e-45
Identity = 79/154 (51.30%), Postives = 105/154 (68.18%), Query Frame = 0
Query:   88 ETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTL 241
            E W  P  +QW+QLLL SF +  G  L+  + + +  EQA+AL+ +  V+VSH  + DP+L YGN+ AL LWE+D E LT +PSR TAEP+ + ER R+L + + KG+IDDY+GVRIS TG RF + +AIVW V  T G + GQAATFS W  L
Sbjct:    7 ERWADPAVIQWSQLLLGSFRRWLGRDLIERKGSPE--EQAKALYLAPVVVVSHGMEADPILNYGNKIALDLWELDWEKLTKTPSRLTAEPMNQAERARMLTQAQEKGFIDDYKGVRISGTGKRFLVEQAIVWNVVGTEGEQIGQAATFSRWTFL 158          
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|941172195|ref|WP_055076437.1| (MEKHLA domain-containing protein [Pseudanabaena sp. 'Roaring Creek'])

HSP 1 Score: 158.688 bits (400), Expect = 2.379e-45
Identity = 78/155 (50.32%), Postives = 105/155 (67.74%), Query Frame = 0
Query:   88 ETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTLS 242
            E W   + +   QLLL SF   TG+ L+   D     E A +LF ++ V+VSH TQ DP+L YGN+KAL LW+MD +TLTS+PSRYTAEP+ R ER++LL + +S+GYI +YRG+RI+S G RF I +AI+W V D      GQAATF+ W  ++
Sbjct:    7 EPWLQTELLAHIQLLLYSFHHWTGNDLIPIADRQSPLEIANSLFNANFVVVSHGTQADPILNYGNQKALDLWKMDWQTLTSTPSRYTAEPIERSEREQLLAQAKSQGYISNYRGIRIASNGDRFYIDRAIIWNVVDKNNKLWGQAATFANWEAIA 161          
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|1121288642|ref|WP_073601244.1| (MEKHLA domain-containing protein [Hydrococcus rivularis] >gi|1115255763|gb|OKH20153.1| MEKHLA domain-containing protein [Hydrococcus rivularis NIES-593])

HSP 1 Score: 158.303 bits (399), Expect = 2.752e-45
Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 0
Query:   86 AEETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTL 241
            +++ W+ P+ + W+Q+LL+S+EK     L+  +   D  EQA+ALF +  V+VSH T+ DP+L YGN+ AL LWEM  +   ++PSR TAEP+ REER+R+L     +G+IDDYRG+RIS TG RF I  AIVW + D      GQAATFS+W  L
Sbjct:    4 SKDVWQQPEIISWSQILLNSYEKLLKKPLIERKG--DRLEQAKALFLAPFVVVSHGTESDPILNYGNQMALTLWEMSWQDFIATPSRLTAEPINREERERMLALAAQQGFIDDYRGIRISKTGRRFLIEGAIVWNLTDFQNCVAGQAATFSQWSFL 157          
BLAST of EWM29403.1 vs. NCBI_GenBank
Match: gi|493554104|ref|WP_006507660.1| (MEKHLA domain-containing protein [Xenococcus sp. PCC 7305] >gi|442795914|gb|ELS05251.1| MEKHLA domain-containing protein [Xenococcus sp. PCC 7305])

HSP 1 Score: 157.918 bits (398), Expect = 3.414e-45
Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0
Query:   90 WKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTL 241
            W   Q + W+Q+LLDSF    G  L+S   T +  +QA+ LF S  V+VSH TQ+DP+L YGN+ AL LW M  E LT +PSR TAEPV RE R+ +L +   +GYID+Y GVRISSTG+RF I KAI+W + ++ G + GQAATF+ W  L
Sbjct:    6 WMQSQIIDWSQILLDSFNHFLGYQLISRDATKE--DQAQVLFESPFVVVSHGTQEDPILNYGNQIALELWSMTWEELTQTPSRITAEPVNRETRKAMLQQAAQQGYIDNYTGVRISSTGTRFAIEKAIIWNLVNSSGHKCGQAATFAHWTVL 155          
The following BLAST results are available for this feature:
BLAST of EWM29403.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111932|gb|EWM29403.1|0.000e+0100.00conserved unknown protein [Nannochloropsis gaditan... [more]
gi|1099562789|emb|SFI68712.1|2.383e-5256.88MEKHLA domain-containing protein [Planctomicrobium... [more]
gi|493576442|ref|WP_006529571.1|6.390e-4952.26MEKHLA domain-containing protein [Gloeocapsa sp. P... [more]
gi|1094439365|emb|SEM72824.1|2.713e-4852.87MEKHLA domain-containing protein [Nitrosomonas mar... [more]
gi|1094452145|emb|SET08875.1|2.255e-4753.50MEKHLA domain-containing protein [Nitrosomonas mar... [more]
gi|1064039337|gb|ODT43574.1|7.878e-4651.95MEKHLA domain-containing protein [Nitrospira sp. S... [more]
gi|1085509376|gb|OGW69605.1|1.764e-4551.30MEKHLA domain-containing protein [Nitrospirae bact... [more]
gi|941172195|ref|WP_055076437.1|2.379e-4550.32MEKHLA domain-containing protein [Pseudanabaena sp... [more]
gi|1121288642|ref|WP_073601244.1|2.752e-4548.72MEKHLA domain-containing protein [Hydrococcus rivu... [more]
gi|493554104|ref|WP_006507660.1|3.414e-4551.97MEKHLA domain-containing protein [Xenococcus sp. P... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1258rna1258Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications