rna1241, rna1241 (mRNA) Nannochloropsis gaditana

Overview
Namerna1241
Unique Namerna1241
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length883
Alignment locationCM002457.1:124983..126310 -

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Properties
Property NameValue
Productcell division topological specificity factor
Orig transcript idgnl|cribi|Naga_100305g2.5916.mrna
Orig protein idgnl|cribi|Naga_100305g2.5916
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:124983..126310 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100305g2gene1195Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1241rna1241-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29430.1cds1240Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1241 ID=rna1241|Name=rna1241|organism=Nannochloropsis gaditana|type=mRNA|length=883bp
AATGCACAGGTGGAAGTGGCTTTGTTGGATTGACACGATGGCGGACGCAA
TTAACGAGGGGAACGGGCTGGGGCCTGCACGTATGCCCCTTCTATCCCTC
GGACCCTCCCGACGCTTCACGCTCGCAGACCTCACTGCGGTTGCAACAGG
CACTGCCCACCTGGAGTTGGAAGCCTCGGTCTTGGAATCGCTCCCGGTCG
CCTCCTTCTTTGCGACGTCTGTCTCCGCCACTCTCATCGACTCGGCCTTT
TCATCGCTTCCTGCCGCACCTCTCACGTGCTCCGCAAACTTTTGGACGGT
AGCCGAAACTCGGGCCATTTTGGTAGCTCGCCTCGCCTCCCTGGTACAAG
GCCGTGCCTTCGTGCGCCGCGAAATCCTCGAACGTATGCTCGTCCTCCTC
AATGATGCCTCAACTTTTCCCCCCTTCCGCAAGGGTCACGAAGTCGAGGA
TCTCCAGGCGCTCCTCCAACAACCTCACCCGGAGCCGTTGCAGCCCCCGT
TAAGCCACACAGAAGCCAACGCCTTGCGCACCGGCACCTATGCCAGCACA
GGCCCCGCAGCCCTGCACGCTTATGCCGTTCACAACCTGGTGTCGGCCGC
GGATATGGCGGCGGCTGTGGCCTGCGAAGTGACGCATGCGTCCATGGAGC
CCTTCCAGGCCCTGCATTTTGACATGCACAGGCCACACCGTGGTCAGATG
GCGACCGCGATGAATCTTCGCTTGCTGTTGGAAGGGTCGGCGATGGTTCG
GCCGGCAGTAGGGGCCAAGGGAGGGAGGGGCGGAGGGGGAGGAGGAGGGG
GAGGGGGAGGGGGAGGGGAGGGCGAAGGGGACAATGAGGTCTTACGATGC
GTACCGCAGGTAGGTGTACAGGGAGGGGGCTAG
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protein sequence of rna1241

>rna1241-protein ID=rna1241-protein|Name=rna1241|organism=Nannochloropsis gaditana|type=polypeptide|length=155bp
MHAAPRNSKEQIEAMRDLALRFARAFEGFGLSTSLQSPRNVAKERLSIIL
AHQRLSDVNIQQLQADVLACVQKYVKVRPEEAVSIKVKQDGGIDVFEMQI
ALAGAAANLSAGKQLDEKRTDRFLFTGRRSLASCSLSSMLSRTEPGLSRS
PGLTL
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mRNA from alignment at CM002457.1:124983..126310-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1241 ID=rna1241|Name=rna1241|organism=Nannochloropsis gaditana|type=mRNA|length=1328bp|location=Sequence derived from alignment at CM002457.1:124983..126310- (Nannochloropsis gaditana)
ATGCACGCTGCCCCACGTCAGTTGAGGTTACCCTTTGGGTCAGGGGTAGG
AGGGCAAGGGGCCCGACCAAATCTATCCCACCAGACCAAAACCCCAACAC
AATCAAAGAATGACCGTGTCCCACGCAAATGACCGTGTGGCAACGGCGAC
AAGCGCGGAGTACATGTCGGTGCCTTGCATGTTCGCCGTGGTGGTGATGG
CGGTGATTCATACGACTTTTGTCCCTTCCCTTTTTCCTGTCGCTGAAGAA
ACTTGAAAGGGCCCCGCCATCAGCGAGGCTTCTCTGCCCTGGAATATATT
ATCATCCTACCCGTGACACGACCCACATCCGCAACGACAGGGAACTCAAA
GGAGCAAATTGAAGCGATGAGAGATCTAGCGCTGCGTTTTGCGCGGGCAT
TCGAAGGTTTTGGACTTAGCACGAGTCTCCAATCGCCTCGGTGGGTCGAA
GAGGGAAAGTGGGTGGTCATTCACTACAGACCTTGTCCTAAGTTCTCGCC
CGTACAACACTCACTTTCCGCTCACACAACACTCCATCCTATCTAAAGCA
ATGTGGCGAAGGAGAGGTTGTCCATAATTCTTGCCCATCAACGCCTCTCT
GACGTGAACATTCAGCAGCTTCAGGTGGGTGCGCGCCTAGTCTACCCTCA
TGTTGCCACTTAGCAGAAGAAGGGGGGGGCGGGCTGGCAAACTGCATGGA
TTTGTGGAATCAAATGTTCAGACATGCTATCCAAACCCTGTGACAGGCGG
ATGTCCTTGCTTGTGTGCAAAAATATGTCAAAGTGAGACCTGAAGAAGCT
GTCTCCATAAAAGGTGAGGCAGGCAGGATTGATTGAGCATCCATGATGGC
GAATGCAGGCAGGATTGATTGAGCATCCATGATGGCGAATACGTAAACGT
AAATATTGCCGTGCTCTTTTCTAGTCTCAGTGGACAAAAGTAGAGTCTTT
CTCGCTGGCATTGTGGCCAGAATCGCACATATGTGAAAATTGATGCTCTC
CAGTCGTCCTCTCATTTTTATCGCGTGCACTTGCTCACATGTCCCCGTTG
CACCAAAATTCGCAGTAAAACAAGACGGGGGAATCGACGTGTTCGAAATG
CAAATTGCCTTGGCCGGGGCTGCTGCTAATTTATCGGCGGGAAAGCAGTA
AAGCTGAGGCTGGATGGGGGGAGATTACACACGTGTGACTGTGCGGGTCA
GGTTGGATGAGAAAAGGACGGATCGATTCTTATTTACGGGTCGGAGGAGC
CTAGCTTCTTGCTCTCTCAGTTCCATGTTGTCACGTACTGAGCCCGGGCT
TTCGAGGTCGCCGGGACTGACTCTGTGA
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Coding sequence (CDS) from alignment at CM002457.1:124983..126310-

>rna1241 ID=rna1241|Name=rna1241|organism=Nannochloropsis gaditana|type=CDS|length=2808bp|location=Sequence derived from alignment at CM002457.1:124983..126310- (Nannochloropsis gaditana)
GTTGGATGAGAAAAGGACGGATCGATTCTTATTTACGGGTCGGAGGAGCC
TAGCTTCTTGCTCTCTCAGTTCCATGTTGTCACGTACTGAGCCCGGGCTT
TCGAGGTCGCCGGGACTGACTCTGTGATAAAACAAGACGGGGGAATCGAC
GTGTTCGAAATGCAAATTGCCTTGGCCGGGGCTGCTGCTAATTTATCGGC
GGGAAAGCAGCGGATGTCCTTGCTTGTGTGCAAAAATATGTCAAAGTGAG
ACCTGAAGAAGCTGTCTCCATAAAAGCAATGTGGCGAAGGAGAGGTTGTC
CATAATTCTTGCCCATCAACGCCTCTCTGACGTGAACATTCAGCAGCTTC
AGGGAACTCAAAGGAGCAAATTGAAGCGATGAGAGATCTAGCGCTGCGTT
TTGCGCGGGCATTCGAAGGTTTTGGACTTAGCACGAGTCTCCAATCGCCT
CGATGCACGCTGCCCCACGTTGGATGAGAAAAGGACGGATCGATTCTTAT
TTACGGGTCGGAGGAGCCTAGCTTCTTGCTCTCTCAGTTCCATGTTGTCA
CGTACTGAGCCCGGGCTTTCGAGGTCGCCGGGACTGACTCTGTGATAAAA
CAAGACGGGGGAATCGACGTGTTCGAAATGCAAATTGCCTTGGCCGGGGC
TGCTGCTAATTTATCGGCGGGAAAGCAGCGGATGTCCTTGCTTGTGTGCA
AAAATATGTCAAAGTGAGACCTGAAGAAGCTGTCTCCATAAAAGCAATGT
GGCGAAGGAGAGGTTGTCCATAATTCTTGCCCATCAACGCCTCTCTGACG
TGAACATTCAGCAGCTTCAGGGAACTCAAAGGAGCAAATTGAAGCGATGA
GAGATCTAGCGCTGCGTTTTGCGCGGGCATTCGAAGGTTTTGGACTTAGC
ACGAGTCTCCAATCGCCTCGATGCACGCTGCCCCACGTTGGATGAGAAAA
GGACGGATCGATTCTTATTTACGGGTCGGAGGAGCCTAGCTTCTTGCTCT
CTCAGTTCCATGTTGTCACGTACTGAGCCCGGGCTTTCGAGGTCGCCGGG
ACTGACTCTGTGATAAAACAAGACGGGGGAATCGACGTGTTCGAAATGCA
AATTGCCTTGGCCGGGGCTGCTGCTAATTTATCGGCGGGAAAGCAGCGGA
TGTCCTTGCTTGTGTGCAAAAATATGTCAAAGTGAGACCTGAAGAAGCTG
TCTCCATAAAAGCAATGTGGCGAAGGAGAGGTTGTCCATAATTCTTGCCC
ATCAACGCCTCTCTGACGTGAACATTCAGCAGCTTCAGGGAACTCAAAGG
AGCAAATTGAAGCGATGAGAGATCTAGCGCTGCGTTTTGCGCGGGCATTC
GAAGGTTTTGGACTTAGCACGAGTCTCCAATCGCCTCGATGCACGCTGCC
CCACGTTGGATGAGAAAAGGACGGATCGATTCTTATTTACGGGTCGGAGG
AGCCTAGCTTCTTGCTCTCTCAGTTCCATGTTGTCACGTACTGAGCCCGG
GCTTTCGAGGTCGCCGGGACTGACTCTGTGATAAAACAAGACGGGGGAAT
CGACGTGTTCGAAATGCAAATTGCCTTGGCCGGGGCTGCTGCTAATTTAT
CGGCGGGAAAGCAGCGGATGTCCTTGCTTGTGTGCAAAAATATGTCAAAG
TGAGACCTGAAGAAGCTGTCTCCATAAAAGCAATGTGGCGAAGGAGAGGT
TGTCCATAATTCTTGCCCATCAACGCCTCTCTGACGTGAACATTCAGCAG
CTTCAGGGAACTCAAAGGAGCAAATTGAAGCGATGAGAGATCTAGCGCTG
CGTTTTGCGCGGGCATTCGAAGGTTTTGGACTTAGCACGAGTCTCCAATC
GCCTCGATGCACGCTGCCCCACGTTGGATGAGAAAAGGACGGATCGATTC
TTATTTACGGGTCGGAGGAGCCTAGCTTCTTGCTCTCTCAGTTCCATGTT
GTCACGTACTGAGCCCGGGCTTTCGAGGTCGCCGGGACTGACTCTGTGAT
AAAACAAGACGGGGGAATCGACGTGTTCGAAATGCAAATTGCCTTGGCCG
GGGCTGCTGCTAATTTATCGGCGGGAAAGCAGCGGATGTCCTTGCTTGTG
TGCAAAAATATGTCAAAGTGAGACCTGAAGAAGCTGTCTCCATAAAAGCA
ATGTGGCGAAGGAGAGGTTGTCCATAATTCTTGCCCATCAACGCCTCTCT
GACGTGAACATTCAGCAGCTTCAGGGAACTCAAAGGAGCAAATTGAAGCG
ATGAGAGATCTAGCGCTGCGTTTTGCGCGGGCATTCGAAGGTTTTGGACT
TAGCACGAGTCTCCAATCGCCTCGATGCACGCTGCCCCACGTTGGATGAG
AAAAGGACGGATCGATTCTTATTTACGGGTCGGAGGAGCCTAGCTTCTTG
CTCTCTCAGTTCCATGTTGTCACGTACTGAGCCCGGGCTTTCGAGGTCGC
CGGGACTGACTCTGTGATAAAACAAGACGGGGGAATCGACGTGTTCGAAA
TGCAAATTGCCTTGGCCGGGGCTGCTGCTAATTTATCGGCGGGAAAGCAG
CGGATGTCCTTGCTTGTGTGCAAAAATATGTCAAAGTGAGACCTGAAGAA
GCTGTCTCCATAAAAGCAATGTGGCGAAGGAGAGGTTGTCCATAATTCTT
GCCCATCAACGCCTCTCTGACGTGAACATTCAGCAGCTTCAGGGAACTCA
AAGGAGCAAATTGAAGCGATGAGAGATCTAGCGCTGCGTTTTGCGCGGGC
ATTCGAAGGTTTTGGACTTAGCACGAGTCTCCAATCGCCTCGATGCACGC
TGCCCCAC
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Synonyms
Publications