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Properties
| Property Name | Value |
|---|
| Product | histidyl-trna synthetase |
| Orig transcript id | gnl|cribi|Naga_102318g1.4409.mrna |
| Orig protein id | gnl|cribi|Naga_102318g1.4409 |
| Gene | HAL |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:121372..122056 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1239 ID=rna1239|Name=rna1239|organism=Nannochloropsis gaditana|type=mRNA|length=402bp
ATGTTCTCAGTCAGTGGCACTCAGACGCCCTGCGTGGGCGTGAGCATCGG
CGTGGAACGTGTGTTGACCATCATGGAAGCCAGGAGCCAGCAAGCCCGGG
CCGCAAGGGAGGGCGGGGGGGAGGGCGGGGGGGAGGGCGGGCTCCCTCCC
CGCCGACGCCGTTCCCCCTTTGTGGAGGTTCTGGTGGCCACCATCGGTGC
CAACATGCTGCCGCACCGGATGAGACTGGCCCGGCTGTTATGGGCCGCCG
GGATTCCCGCCGAGTACCTCCCTCAGGAGAACCCGAAGCTGAAGAAGCAG
ATGGAGTATGCTCACGAACAGGGGATCCCTTTCCTGGTGATTGTGGGGGG
CGACGAACGGAAGCGGGGCACGGTGAAGAGGAGGAGATGGCGCAGAAGCT
GA back to topprotein sequence of rna1239 >rna1239-protein ID=rna1239-protein|Name=rna1239|organism=Nannochloropsis gaditana|type=polypeptide|length=79bp
MARGRFREFYQCDFDIAGTYPTMVPDAEVLTVAVEILRALPIGPFAIKLN
HRKILDSVFEISRQGELGSSEEGDDRGER back to topmRNA from alignment at CM002457.1:121372..122056- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1239 ID=rna1239|Name=rna1239|organism=Nannochloropsis gaditana|type=mRNA|length=685bp|location=Sequence derived from alignment at CM002457.1:121372..122056- (Nannochloropsis gaditana)
ATGGCCCGCGGCCGGTTTCGGGAATTCTATCAGTGCGACTTTGACATTGC
AGGTGAGCATCGACCGTTGCCTCCCTCCCTCCCTCTCTCCCGTCCTCCTT
CCCCTCTTCCCTGCTTCCTCCCCTTGGTCCTCCTCTAGCCCATCTCCTTC
TCCCTGGCCCGACGGGCTCGTTTCGAATGCGCCCTCTCTCATGTTGCCCT
CCCCCTTCTTCCCTCCCTCCTCCCCTCCCTCCCTCACTCCCTCCCTCCCT
CCTCAGGCACTTACCCGACCATGGTCCCGGACGCTGAGGTCTTGACGGTG
GCGGTGGAGATCCTTCGCGCTCTCCCCATCGGCCCTTTCGCCATCAAGCT
CAACCACCGCAAAATCCTGGACAGGTACCGAGGGAGGGCGGGACGGAGGG
AGGGCGGAAGGGAGGGAGGGACGGAGGGAAGGAAGGACGGGGGAGGAAGG
ACCCAGGCACCCCGTAGCTTCCTGGGACGGTCCCTCAGGCGCTCCAATCA
TTGCCTTGTCCCCCCTTCACTTTTGCTGTTTTAGTAATTGAATTTGATTA
TTTCCTCCCGTCCAGCGTGTTCGAGATCTGTGGGGTGCCCCCGGAGAAAT
TTCGCAGCATCTGCTCGGCCGTGGACAAGCTCGACAAGGAGAGCTGGGAA
GCAGTGAAGAAGGAGATGACCGAGGAGAAAGGTAG back to topCoding sequence (CDS) from alignment at CM002457.1:121372..122056- >rna1239 ID=rna1239|Name=rna1239|organism=Nannochloropsis gaditana|type=CDS|length=960bp|location=Sequence derived from alignment at CM002457.1:121372..122056- (Nannochloropsis gaditana)
CTCGACAAGGAGAGCTGGGAAGCAGTGAAGAAGGAGATGACCGAGGAGAA
AGGTAGCGTGTTCGAGATCTGCACTTACCCGACCATGGTCCCGGACGCTG
AGGTCTTGACGGTGGCGGTGGAGATCCTTCGCGCTCTCCCCATCGGCCCT
TTCGCCATCAAGCTCAACCACCGCAAAATCCTGGACAGATGGCCCGCGGC
CGGTTTCGGGAATTCTATCAGTGCGACTTTGACATTGCAGCTCGACAAGG
AGAGCTGGGAAGCAGTGAAGAAGGAGATGACCGAGGAGAAAGGTAGCGTG
TTCGAGATCTGCACTTACCCGACCATGGTCCCGGACGCTGAGGTCTTGAC
GGTGGCGGTGGAGATCCTTCGCGCTCTCCCCATCGGCCCTTTCGCCATCA
AGCTCAACCACCGCAAAATCCTGGACAGATGGCCCGCGGCCGGTTTCGGG
AATTCTATCAGTGCGACTTTGACATTGCAGCTCGACAAGGAGAGCTGGGA
AGCAGTGAAGAAGGAGATGACCGAGGAGAAAGGTAGCGTGTTCGAGATCT
GCACTTACCCGACCATGGTCCCGGACGCTGAGGTCTTGACGGTGGCGGTG
GAGATCCTTCGCGCTCTCCCCATCGGCCCTTTCGCCATCAAGCTCAACCA
CCGCAAAATCCTGGACAGATGGCCCGCGGCCGGTTTCGGGAATTCTATCA
GTGCGACTTTGACATTGCAGCTCGACAAGGAGAGCTGGGAAGCAGTGAAG
AAGGAGATGACCGAGGAGAAAGGTAGCGTGTTCGAGATCTGCACTTACCC
GACCATGGTCCCGGACGCTGAGGTCTTGACGGTGGCGGTGGAGATCCTTC
GCGCTCTCCCCATCGGCCCTTTCGCCATCAAGCTCAACCACCGCAAAATC
CTGGACAGATGGCCCGCGGCCGGTTTCGGGAATTCTATCAGTGCGACTTT
GACATTGCAG back to top
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