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Properties
| Property Name | Value |
|---|
| Product | periplasmic protease |
| Orig transcript id | gnl|cribi|Naga_100033g48.8392.mrna |
| Orig protein id | gnl|cribi|Naga_100033g48.8392 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:321528..324768 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna122 ID=rna122|Name=rna122|organism=Nannochloropsis gaditana|type=mRNA|length=1923bp
ATGACCCAGAGCGACAGCGAGACAAGAAGTTACAACACGTTCGACGATCA
ACGCGACAACTTGCCGTCAATTTCTACTGCAGCCCCTTCCACCCACTACA
ATCCCTCCTCTAGCGTGCATCATGCCTCACGTGCTCCCCGCGACAGCGCT
CCCGAAGGCTCCTGGCAGACAGGGCGCGAAGATATCGACAGCGTAAAGTC
GGACCGTTCGAGTACACTTGTTCTGTCCACGGCCCAAAAGCCGCACGAGA
AGCATCGGTCTTCCTGGTTGCCGTTTGGTGCGGACAACTTGGACAGCGAG
GGAGGGAGCAGCCACACAAGCAGTCTGACGCACGATGGGACGATGGTGCA
ACAGACTTCTGAAGTTCAGGACTACGACGAGGCCGAAGGCGCCAGTCCCG
TCCACGCAGGCGCGGCGGAGGCAGCGAACAAAGGGTTCAAGAAGCGAGCA
TGGACACCGAGCGAGGATGGGATTTTGCGGGAGTCGGTTTCAAGCAACGG
CGCCAAGGATTGGAACTATATCTCGTCTCTGTTGACAGAGCGGTCAGCCA
AACAATGTTGTGAACGCTGGCACAACTACCTAAAGCCCGACATTCGAAGA
GACGCCTGGCGGCCTGAGGAGGACAAAGTCATTCTGGAATTCCATCGCGC
ATTCTGCAACAAATGGAGCAAGATTGCCGAGCTTCTTCCGGGTCGGACAG
GGAACTCGGTCAAGAACCGTTACTACTGTCTGCTGCGTCGGGACAAACGG
AACGCGAGCGTGAGCAAAGGTCGCTCCCTGCAGGATGCCGAAGGCGACCG
AGCGGCCGCACAGGTGCAGCGGGACCAGATGTACTTGCCAAGAGACAGGG
GCCCTCCCCATGAGATTTTCTCGCATCAGCAGGGCGGCTGCCTCCCGCCC
TCGCCAAAGGCCGTCCAGTCCCTTCAAATGCAGGCCCAACAGCAGCATGG
ATATTTTGGCCTTTCCAACTCAGCTTTCCCAGCGCAAGACGTGGCTCGAT
CGCTGCAATCGTTGGGAGGACGAGACTCAGGTCGAACGCCGGGGGGCCTG
TCCACGTCCGAGTCCTTAGCGTCTTTCTCCGCGCCACATTCCTCGCAGCA
ACACCCTCCTTTCCCGACGAGGCAATATCACGCCGAAAACAAGGCAGGGG
GTATCGAGGAAGGTTTCCCAAGTGGTCATGCCTGGGACCCGTCGTGGGGG
CAGTCCACAGCCGCACCCTCTCTCGACGTTAGCCGTTCACAGCAATCGCA
TCACCAGCCCATCCCCGCCCCGGGACACTACAACCTGTCCAATGCTCAGG
GTCATGGCGGCAACGCCGCCTCGTTTCAGAACCAGGCCTACTACAGTAGC
ACGGGACAGGGCCTAGGCCCCATGCCCAACGTCCTGCCACCCTTCCCGCC
GGGGCCCCAAGCCATGCTAAATTTCAGTGCGGCCAGCAGGCCCAGGGGGG
GGTACCAGGGTGCACAAGGACACACGGGATCTGAGGAGGGAAAAGTGCCG
AGCACATCCATGTACGCGATGCACTCGGCGGGGTCGGGCATGGGAGTGCA
CGGTGGCTATCACCAAGGCACAGGAGCTATCACAGATATTCGGTGTCCCT
CCAGCGGCGGTGCCCAAAGACCGCCCCTTCCTGGGGGCAGCAACGCGGGA
GGGGAGCAGCACCCGTCTTTTCTTTTCCAATCTATGCATTCCGCGAGCAT
GGCGTCTCCGGCTCTACATGGCTGCAACGAAAGCGAGGGCGGGCATGAGA
TACCGCGGCAATGGGAGGGCTTGAGGCAGGAGGAACGGATGGGCAGCCAC
GTTGACGAGATGCAGGACACACTGTACGGCAGCAACAGAGGTCAAAGCAT
CTCCAACGCCCAAGCCGGCGAGGGGCCTGGCAGGGACCCCCCCGGTGGGA
CAGACGGGTACACGGTCGTCTAA back to topprotein sequence of rna122 >rna122-protein ID=rna122-protein|Name=rna122|organism=Nannochloropsis gaditana|type=polypeptide|length=763bp
MAAQREARVPAIVRPKYGIRCPIWRCRLLQRTLVLLVFVLWQFSHISCAN
EVPSDDATEDSTALPGAAGVGNITDHSSPSPTDDVDALPPTLAPRTTPLE
ADNPGPVPRSGALDSFTSKDSHKDRGKDKDNQEEENEDDEEEEENEEEEE
EEEEEEEEEEDGGDADQEEESDEEDEESEDDEDEPAYKRRERRPGHTYQV
GPKQSLVARLAAKVLNQTSSSVSLPSTNATVVAPSLVRALKTLPRKQLFA
LGFKIVLVGGVLYSLRHLFTFKTTMQCLMIVSILAEIAGRLGLLKDLKLP
SPPFPSSLSTPRALASIRGPPLFQFELINGRYQADRIRLSLLTGDTTGQA
LTAAAVSRKAALTAAVAAAMGNGSSSSGGSNQGPLWTEARHTQTYGMTGK
EELREVGNASSSSSQPGAVSSAHSPLNRTAVNPNGTQGSTAAPLPALPTP
RPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGG
AAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFA
TIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGD
QEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGL
VDEIMTSEEYLAWRLLTHDVVKVSPAPDARRFPGSFFLPGQGGGGRGGGA
PLGPTTAMAVLTSIREMVARRCVKRIGRVLVDEEEKAGVSVADRVLHSVA
SLLLGQKAPLIIC back to topmRNA from alignment at CM002455.1:321528..324768+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna122 ID=rna122|Name=rna122|organism=Nannochloropsis gaditana|type=mRNA|length=3241bp|location=Sequence derived from alignment at CM002455.1:321528..324768+ (Nannochloropsis gaditana)
GCGTGTTCTCGTTCACTTGTGGTGCTCTACATGCCGATGGTGTTTGCGGC
ACGCACTCCCGAACCTCAACTCCGAAGACATAAGGTAGGAGGCATTGCCA
CGCCTCTCCTCGCGTGAATCCGGTCTTGAGCCTTCGCTCAtaactctcct
cctcgcgctttccctccttagGTCTGTGCTTGTGGGGTTTCCCAAAATCT
CGTACCTGTGGAAGCTTACTTGCCACTGTACCATTTGCTTATGAATGCAA
GAAGATAGCAAGATCGAATTTACATGAAGCTCAAGGAAATGCCTCAGGGA
CCGAAATCTCGTCATATGAACATgggtacgagaaacatcgTAAACATCAG
CGCTCAGGCGCCTTTTCTCTAGCTCGAGCAGCAAGAGGCCTGTTCGAGCA
CAAAGGAGATGAAAATTGCCAATATCTGAGTACACTTGTGAGTGTACGTG
AATTAACGATATCGGTGAGCATTTGCATGGTAACAAGAGGCATCCAGGct
ggagaaaagaaaaggagataggcagggggagcaagCACAGCTGTCCTATC
CTCCGCTCGCTTGCCTCAGCCGCAGAGAACAAAATTGAGGCGAAGGAGAC
ACTCGAAATAAGGCCTGCCTTCAGCGATGTTATCAATGCCCAAATAATTT
CGTCCGTCACATTTAAATGTTTCGGGAAAATTATAATAATTTGCTCGCAC
ACGGGACAACAGGAGGCTGGGATGGCTGCACAAAGAGAAGCGCGGGTTCC
TGCGATTGTGCGACCAAAGTACGGTATCAGATGTCCTATCTGGAGATGCC
GATTGCTTCAAAGGACACTAGTCCTGCTCGTCTTCGTTCTTTGGCAATTT
TCTCACATTTCCTGCGCCAATGAGGTTCCATCGGACGATGCAACAGAGGA
CAGTACTGCCTTGCCCGGTGCAGCAGGAGTAGGGAATATCACTGACCACT
CGAGTCCTAGCCCTACTGATGATGTGGACGCACTCCCTCCGACCCTTGCA
CCACGCACGACTCCTCTAGAAGCAGACAATCCTGGTCCTGTTCCTAGGTC
CGGTGCGCTGGATTCTTTCACATCGAAAGACAGTCACAAGGATCGTGGAA
AGGACAAAGATaaccaagaggaggagaacgaggacgatgaggaagaagag
gagaacgaggaggaggaggaggaagaggaggaggaagaggaggaggagga
ggacgggggagacgcagaccaggaggaggaaagtgacgaggaggacgagg
agagcgaaGACGATGAAGACGAACCGGCATACAAGCGCCGGGAGAGGCGG
CCTGGGCACACCTACCAGGTAGGACCGAAGCAGTCTCTTGTGGCTCGCCT
CGCTGCCAAGGTCTTAAATcaaacctcctcctccgtctccctcccttcga
cAAATGCAACCGTCGTAGCACCATCGCTGGTAAGAGCACTGAAGACTTTG
CCACGGAAGCAACTTTTCGCCCTGGGCTTCAAGATTGTGCTTGTGGGAGG
AGTTTTGTATTCGCTGCGACACTTGTTCACGTTCAAGACCACGATGCAAT
GCCTCATGATAGTCTCAATTCTGGCAGAAATTGCCGGCCGCCTCGGGCTC
TTGAAGGACTTGaaactcccctcccctcccttcccgagctccctctccac
gccccgGGCCCTAGCATCCATTCGTggtccccccctcttccaatTTGAGC
TCATCAACGGGCGGTACCAAGCGGACCGTATCCGCCTCAGCCTCTTGACG
GGCGACACAACGGGCCAAGCCCTGACGGCCGCAGCAGTCTCGCGAAAGGC
AGCCCTCACTGCGGCCGTAGCGGCGGCGATGGGCAacggaagcagcagca
gcggcggcagcaacCAAGGCCCCCTGTGGACCGAGGCGCGGCATACCCAA
ACGTACGGGATGactggcaaggaggagctccgggaggtgggaaacgcctc
gtcttcgtcttcacaGCCCGGGGCCGTGTCGTCTGCCCACAGCCCCCTCA
ACAGGACCGCCGTCAATCCCAACGGGACCCAAGGGTCGACTGcggccccc
ttgcccgccctGCCGACCCCGCGGCCGCGCGCCTACGTGGTGACGCTGAA
AGGCGAcatgctcctctcccaagGCGCTTATTTGACCTCCGTggtgtcct
tcctcctcgagaTCGCTCGGTCCggaccggggggggacgaaCTGGTGCTC
CTGCTCGAGTCTGGGGGCGGCGCGGCGTACGAGTACGGCCTAAGCGCTGC
CCAGTTGGAGAGGCTCCGCCGGGCCGGCATCCGTCTGACCGTGTGCGTGG
ACAAAATCGCGGCGAGCGGGGGTTACAtgctggcggtggtggcggacaCG
TTGGTGGCAGCCCCTTTCGCCACGATCGGGTCCATCGGGGCGACCACCTC
GGTGCCTGTCCTGAACGTGGGGGTGGCCTTGAAACGGCTGGGCATCCACG
CCTACTCGATCAAGGCGGGGAAACACAAGGGGAGCGGGGGCATGCTCCTG
GTGGGGGACGCGAAGGGGGACCAAGAGGCACTGGGCAAGCTCCGGGAGGA
CCTGGCGAAGGTCCACGAGGCCTTCAAAGCCCACATTGGCCGGTGGCGGA
AgatggtggacgtggaggcggtgggcacGGGCGAGGTCtggcaagggcgg
gaggccaaggccctggGTTTGGTGGACGAGATCATGACCTCAGAGGAGTA
TCTGGCCTGGCGGCTGTTGACGCACGACGTGGTAAAGGTCTCACCGGCCC
CGGACGCGAGGCGTTTCCCGGGCTCATTTTTCTTGCctgggcagggcggg
ggcgggaggggtggcGGGGCACCGTTGGGACCGACTACGGCCATGGCAGT
ACTGACCAGCATCAGGGAGATGGTTGCTCGTCGGTGTGTCAAGCGAATAG
GAAGAGTGcttgtggacgaggaggaaaaggcgggagTGTCGGTGGCAGAC
CGTGTCCTCCACAGCGTggcctccttgctgctgGGGCAGAAAGCTCCCCT
GATTATTTGCTAGGGGTAGCCAGTGTGGAAGTTGGCGATGGTAGGGGATG
CGCGTCTTGTGCACGCCTGTACATGATAGATCTAGACGCGGAGGGTGACT
GTTTCATGGGGGATTCTATATGCTGAAATGCTCGGTCTGAAACAAACCAC
AGCATCTGCCCCGCTGTTGTAAGCGATTTGCTATGGCAAACGCCATGTCA
CGTCATGGACCATTGAGAAAGTAAAAGTATTTTTGCGGATG back to topCoding sequence (CDS) from alignment at CM002455.1:321528..324768+ >rna122 ID=rna122|Name=rna122|organism=Nannochloropsis gaditana|type=CDS|length=2292bp|location=Sequence derived from alignment at CM002455.1:321528..324768+ (Nannochloropsis gaditana)
ATGGCTGCACAAAGAGAAGCGCGGGTTCCTGCGATTGTGCGACCAAAGTA
CGGTATCAGATGTCCTATCTGGAGATGCCGATTGCTTCAAAGGACACTAG
TCCTGCTCGTCTTCGTTCTTTGGCAATTTTCTCACATTTCCTGCGCCAAT
GAGGTTCCATCGGACGATGCAACAGAGGACAGTACTGCCTTGCCCGGTGC
AGCAGGAGTAGGGAATATCACTGACCACTCGAGTCCTAGCCCTACTGATG
ATGTGGACGCACTCCCTCCGACCCTTGCACCACGCACGACTCCTCTAGAA
GCAGACAATCCTGGTCCTGTTCCTAGGTCCGGTGCGCTGGATTCTTTCAC
ATCGAAAGACAGTCACAAGGATCGTGGAAAGGACAAAGATaaccaagagg
aggagaacgaggacgatgaggaagaagaggagaacgaggaggaggaggag
gaagaggaggaggaagaggaggaggaggaggacgggggagacgcagacca
ggaggaggaaagtgacgaggaggacgaggagagcgaaGACGATGAAGACG
AACCGGCATACAAGCGCCGGGAGAGGCGGCCTGGGCACACCTACCAGGTA
GGACCGAAGCAGTCTCTTGTGGCTCGCCTCGCTGCCAAGGTCTTAAATca
aacctcctcctccgtctccctcccttcgacAAATGCAACCGTCGTAGCAC
CATCGCTGGTAAGAGCACTGAAGACTTTGCCACGGAAGCAACTTTTCGCC
CTGGGCTTCAAGATTGTGCTTGTGGGAGGAGTTTTGTATTCGCTGCGACA
CTTGTTCACGTTCAAGACCACGATGCAATGCCTCATGATAGTCTCAATTC
TGGCAGAAATTGCCGGCCGCCTCGGGCTCTTGAAGGACTTGaaactcccc
tcccctcccttcccgagctccctctccacgccccgGGCCCTAGCATCCAT
TCGTggtccccccctcttccaatTTGAGCTCATCAACGGGCGGTACCAAG
CGGACCGTATCCGCCTCAGCCTCTTGACGGGCGACACAACGGGCCAAGCC
CTGACGGCCGCAGCAGTCTCGCGAAAGGCAGCCCTCACTGCGGCCGTAGC
GGCGGCGATGGGCAacggaagcagcagcagcggcggcagcaacCAAGGCC
CCCTGTGGACCGAGGCGCGGCATACCCAAACGTACGGGATGactggcaag
gaggagctccgggaggtgggaaacgcctcgtcttcgtcttcacaGCCCGG
GGCCGTGTCGTCTGCCCACAGCCCCCTCAACAGGACCGCCGTCAATCCCA
ACGGGACCCAAGGGTCGACTGcggcccccttgcccgccctGCCGACCCCG
CGGCCGCGCGCCTACGTGGTGACGCTGAAAGGCGAcatgctcctctccca
agGCGCTTATTTGACCTCCGTggtgtccttcctcctcgagaTCGCTCGGT
CCggaccggggggggacgaaCTGGTGCTCCTGCTCGAGTCTGGGGGCGGC
GCGGCGTACGAGTACGGCCTAAGCGCTGCCCAGTTGGAGAGGCTCCGCCG
GGCCGGCATCCGTCTGACCGTGTGCGTGGACAAAATCGCGGCGAGCGGGG
GTTACAtgctggcggtggtggcggacaCGTTGGTGGCAGCCCCTTTCGCC
ACGATCGGGTCCATCGGGGCGACCACCTCGGTGCCTGTCCTGAACGTGGG
GGTGGCCTTGAAACGGCTGGGCATCCACGCCTACTCGATCAAGGCGGGGA
AACACAAGGGGAGCGGGGGCATGCTCCTGGTGGGGGACGCGAAGGGGGAC
CAAGAGGCACTGGGCAAGCTCCGGGAGGACCTGGCGAAGGTCCACGAGGC
CTTCAAAGCCCACATTGGCCGGTGGCGGAAgatggtggacgtggaggcgg
tgggcacGGGCGAGGTCtggcaagggcgggaggccaaggccctggGTTTG
GTGGACGAGATCATGACCTCAGAGGAGTATCTGGCCTGGCGGCTGTTGAC
GCACGACGTGGTAAAGGTCTCACCGGCCCCGGACGCGAGGCGTTTCCCGG
GCTCATTTTTCTTGCctgggcagggcgggggcgggaggggtggcGGGGCA
CCGTTGGGACCGACTACGGCCATGGCAGTACTGACCAGCATCAGGGAGAT
GGTTGCTCGTCGGTGTGTCAAGCGAATAGGAAGAGTGcttgtggacgagg
aggaaaaggcgggagTGTCGGTGGCAGACCGTGTCCTCCACAGCGTggcc
tccttgctgctgGGGCAGAAAGCTCCCCTGATTATTTGCTAG back to top
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