EWM30553.1, cds122 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|585113220|gb|EWM30553.1| (periplasmic protease [Nannochloropsis gaditana]) HSP 1 Score: 1541.17 bits (3989), Expect = 0.000e+0 Identity = 763/763 (100.00%), Postives = 763/763 (100.00%), Query Frame = 0
Query: 1 MAAQREARVPAIVRPKYGIRCPIWRCRLLQRTLVLLVFVLWQFSHISCANEVPSDDATEDSTALPGAAGVGNITDHSSPSPTDDVDALPPTLAPRTTPLEADNPGPVPRSGALDSFTSKDSHKDRGKDKDNQEEENEDDEEEEENEEEEEEEEEEEEEEEDGGDADQEEESDEEDEESEDDEDEPAYKRRERRPGHTYQVGPKQSLVARLAAKVLNQTSSSVSLPSTNATVVAPSLVRALKTLPRKQLFALGFKIVLVGGVLYSLRHLFTFKTTMQCLMIVSILAEIAGRLGLLKDLKLPSPPFPSSLSTPRALASIRGPPLFQFELINGRYQADRIRLSLLTGDTTGQALTAAAVSRKAALTAAVAAAMGNGSSSSGGSNQGPLWTEARHTQTYGMTGKEELREVGNASSSSSQPGAVSSAHSPLNRTAVNPNGTQGSTAAPLPALPTPRPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVSPAPDARRFPGSFFLPGQGGGGRGGGAPLGPTTAMAVLTSIREMVARRCVKRIGRVLVDEEEKAGVSVADRVLHSVASLLLGQKAPLIIC 763
MAAQREARVPAIVRPKYGIRCPIWRCRLLQRTLVLLVFVLWQFSHISCANEVPSDDATEDSTALPGAAGVGNITDHSSPSPTDDVDALPPTLAPRTTPLEADNPGPVPRSGALDSFTSKDSHKDRGKDKDNQEEENEDDEEEEENEEEEEEEEEEEEEEEDGGDADQEEESDEEDEESEDDEDEPAYKRRERRPGHTYQVGPKQSLVARLAAKVLNQTSSSVSLPSTNATVVAPSLVRALKTLPRKQLFALGFKIVLVGGVLYSLRHLFTFKTTMQCLMIVSILAEIAGRLGLLKDLKLPSPPFPSSLSTPRALASIRGPPLFQFELINGRYQADRIRLSLLTGDTTGQALTAAAVSRKAALTAAVAAAMGNGSSSSGGSNQGPLWTEARHTQTYGMTGKEELREVGNASSSSSQPGAVSSAHSPLNRTAVNPNGTQGSTAAPLPALPTPRPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVSPAPDARRFPGSFFLPGQGGGGRGGGAPLGPTTAMAVLTSIREMVARRCVKRIGRVLVDEEEKAGVSVADRVLHSVASLLLGQKAPLIIC
Sbjct: 1 MAAQREARVPAIVRPKYGIRCPIWRCRLLQRTLVLLVFVLWQFSHISCANEVPSDDATEDSTALPGAAGVGNITDHSSPSPTDDVDALPPTLAPRTTPLEADNPGPVPRSGALDSFTSKDSHKDRGKDKDNQEEENEDDEEEEENEEEEEEEEEEEEEEEDGGDADQEEESDEEDEESEDDEDEPAYKRRERRPGHTYQVGPKQSLVARLAAKVLNQTSSSVSLPSTNATVVAPSLVRALKTLPRKQLFALGFKIVLVGGVLYSLRHLFTFKTTMQCLMIVSILAEIAGRLGLLKDLKLPSPPFPSSLSTPRALASIRGPPLFQFELINGRYQADRIRLSLLTGDTTGQALTAAAVSRKAALTAAVAAAMGNGSSSSGGSNQGPLWTEARHTQTYGMTGKEELREVGNASSSSSQPGAVSSAHSPLNRTAVNPNGTQGSTAAPLPALPTPRPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVSPAPDARRFPGSFFLPGQGGGGRGGGAPLGPTTAMAVLTSIREMVARRCVKRIGRVLVDEEEKAGVSVADRVLHSVASLLLGQKAPLIIC 763
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|553189623|ref|XP_005855041.1| (periplasmic protease, partial [Nannochloropsis gaditana CCMP526] >gi|422294017|gb|EKU21317.1| periplasmic protease, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0 Identity = 324/328 (98.78%), Postives = 326/328 (99.39%), Query Frame = 0
Query: 243 LPRKQLFALGFKIVLVGGVLYSLRHLFTFKTTMQCLMIVSILAEIAGRLGLLKDLKLPSPPFPSSLSTPRALASIRGPPLFQFELINGRYQADRIRLSLLTGDTTGQALTAAAVSRKAALTAAVAAAMGNGSSSSGGSNQGPLWTEARHTQTYGMTGKEELREVGNASSSSSQPGAVSSAHSPLNRTAVNPNGTQGSTAAPLPALPTPRPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVAL 570
+PRKQLFALGFKIVLVGGVLYSLRHLFTFKTTMQCLMIVSILAEIAGRLGLLKDLKLPSPPFPSSLSTPRALAS+RGPPLFQFELINGRYQADRIRLSLLTGDTTGQALTAAAVSRKAALTAAVAAAMGNGSSSSGGSNQGPLWTEARHTQTYGMTGKEELREVGNASSSSSQPGAVSSAHSPLNRTAVNPNGTQGSTAAPLPALPTPRPRAYVVTLKGDM LSQGAYLTSVVSFLLE ARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVAL
Sbjct: 1 MPRKQLFALGFKIVLVGGVLYSLRHLFTFKTTMQCLMIVSILAEIAGRLGLLKDLKLPSPPFPSSLSTPRALASVRGPPLFQFELINGRYQADRIRLSLLTGDTTGQALTAAAVSRKAALTAAVAAAMGNGSSSSGGSNQGPLWTEARHTQTYGMTGKEELREVGNASSSSSQPGAVSSAHSPLNRTAVNPNGTQGSTAAPLPALPTPRPRAYVVTLKGDMFLSQGAYLTSVVSFLLETARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVAL 328
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|760086105|ref|WP_043768576.1| (protease SohB [Algiphilus aromaticivorans]) HSP 1 Score: 179.874 bits (455), Expect = 6.606e-47 Identity = 112/268 (41.79%), Postives = 151/268 (56.34%), Query Frame = 0
Query: 428 RTAVNPNGTQGSTAAPL----------PALPTPRPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVS---PAPDARRF 682
R AV P + S L PA RPR +V+ +GD+ S + L +S LL++A SG DE++L LES GG + YGL+A+QL R+R+ GIRLTV VDK+AASGGYM+A VAD ++AAPFA IGSIG +P N LK I + AG+HK + L + A K E+L H FK I +R +D+EAV +GE W G A LVDE+MTS++YL R+ +HD+ ++S P P +R
Sbjct: 60 RLAVTPATQRKSVIKALKRQRKDENKAPAGQKTRPRGFVLDFEGDIRASAVSSLREEISALLQVADSG---DEIILRLESPGGMVHSYGLAASQLARIRKRGIRLTVAVDKVAASGGYMMACVADRIIAAPFAVIGSIGVVMQLP--NFHRLLKNKEIDYELLTAGEHKRT----LTVFGENTDAARSKALEELEDTHALFKEFIHSYRPQLDLEAVASGEHWFGTRAAERQLVDELMTSDDYLLQRMGSHDLFRISLRQPKPLMQRL 318
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|1097547488|emb|SFR46062.1| (inner membrane peptidase. Serine peptidase. MEROPS family S49 [Marinobacter daqiaonensis]) HSP 1 Score: 179.874 bits (455), Expect = 1.003e-46 Identity = 99/224 (44.20%), Postives = 136/224 (60.71%), Query Frame = 0
Query: 451 RPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVS 674
RPR +VV GD+ S L ++ +L +A PG DE+V+ LESGGG + YGL+AAQL+R+R GIRLT CVDK+AASGGYM+A VAD +VA+PFA +GSIG +P N LK+ + + AG+HK + + KG ++ L EDL H FK ++ R +D++AV TG++W G A + L+DE+ TS+EYL DVV VS
Sbjct: 103 RPRTFVVDFDGDIKASDNETLRKAITTVLSVAE--PGRDEVVVRLESGGGLVHAYGLAAAQLDRVRSKGIRLTACVDKVAASGGYMMACVADRIVASPFAVLGSIGVVAQLP--NFHRVLKKHDVDYEILTAGEHKRTLTLFGENTEKGRKKFL----EDLEDTHHLFKDYVSERRPELDIDAVATGDIWFGTRALKMKLIDELKTSDEYLIEACDRSDVVTVS 318
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|654059929|ref|WP_027705682.1| (protease SohB [Zymobacter palmae]) HSP 1 Score: 179.104 bits (453), Expect = 1.718e-46 Identity = 100/223 (44.84%), Postives = 139/223 (62.33%), Query Frame = 0
Query: 442 APLPALPTPRPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWR 664
A L + +P +V+ GD+ S + ++ L+E A G DE+VL LESGGG + YGL+AAQL+RLR AG++LTVCVD++AASGGYM+A AD L+AAPFA IGSIG VP NV LK+ + + AG+HK + ML + +E K EDLA H FK H+ + R +D++ V G++W G++A ALGL+D++ TSE YL+ R
Sbjct: 83 ARLKEDVSEQPVIWVLDFDGDLQASGTDEMAEEITSLIEGAHKG---DEIVLRLESGGGLVHSYGLAAAQLDRLRDAGLKLTVCVDRVAASGGYMMACCADHLIAAPFAVIGSIGVVAQVP--NVHRLLKKHDVDVEILTAGEHKRTLTML----GENTEEGRRKFLEDLADTHALFKQHVRQRRPQLDIDQVADGDIWYGQQAVALGLIDDVQTSEGYLSQR 296
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|655259502|ref|WP_028669997.1| (protease SohB [Saccharospirillum impatiens]) HSP 1 Score: 178.718 bits (452), Expect = 1.957e-46 Identity = 104/244 (42.62%), Postives = 152/244 (62.30%), Query Frame = 0
Query: 453 RAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVSPAPDA---RRFPGSFFLPGQGG 693
+ +V+ KGDM SQ L V+ ++++A + DE+V++LES GGA YGL+A+QL R++ AG+ LTVCVDK+AASGGYM+A +AD ++AAPFA +GSIG VP N+ L+R + + AGKHK M L+G+ +E KL +DL +HE FK +GR+R +D+ AV G+ W +A+ LGLVD++ TS+ YL ++ T+DVV V+ P +R +F QG
Sbjct: 91 QVWVLRFKGDMHASQVDNLRREVTAIIQVANAT---DEVVVVLESPGGAVSGYGLAASQLVRVKEAGLSLTVCVDKVAASGGYMMACIADRIIAAPFAVVGSIGVLAQVP--NIHKLLQRHQVDVEVLTAGKHKAP--MTLMGEKT--EEGRQKLLDDLKAIHERFKELVGRYRPQLDLAAVTEGDFWLAEDARELGLVDQLETSDAYLLGKVKTNDVVSVTWVPQVGVDQRLKKAFSSSVQGA 325
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|499826502|ref|WP_011507236.1| (protease SohB [Chromohalobacter salexigens] >gi|91797151|gb|ABE59290.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Chromohalobacter salexigens DSM 3043]) HSP 1 Score: 177.563 bits (449), Expect = 5.809e-46 Identity = 105/233 (45.06%), Postives = 142/233 (60.94%), Query Frame = 0
Query: 446 ALPTPRPRAYVVTLKGDMLLSQGAYLTSVVSFLL-EIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVSPAP 677
A RPR +V+ GD+ S+ L VS LL E+ DE+V+ L SGGG + YGL++AQL+RLR AG+RLTVCVDK+AASGGYM+A A L+AAPFA IGSIG VP NV LK+ I + AG++K + +L + +E K EDL + H+ FK ++G R +D+E V TGE+W GR+A GL+DE+ TS+ YLA R+ V++V P
Sbjct: 92 AQEAARPRVWVLDFDGDLKASRTPQLAEQVSLLLGEL----QDDDEVVVRLTSGGGLVHAYGLASAQLDRLRDAGVRLTVCVDKVAASGGYMMACCAHRLIAAPFAVIGSIGVVAQVP--NVHRLLKKHDIDVELLTAGRYKRTLTVL----GENTEEGRAKFLEDLRETHDLFKRYVGERRPALDIEKVATGEIWYGRQALDDGLIDEVNTSDGYLAARMEQARVLQVVLEP 314
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|917440125|ref|WP_052046543.1| (protease SohB [Chromohalobacter israelensis]) HSP 1 Score: 176.022 bits (445), Expect = 1.694e-45 Identity = 105/233 (45.06%), Postives = 141/233 (60.52%), Query Frame = 0
Query: 446 ALPTPRPRAYVVTLKGDMLLSQGAYLTSVVSFLL-EIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVSPAP 677
A RPR +V+ GD+ S+ L VS LL E+ DE+V+ L SGGG + YGL++AQL+RLR AG RLTVCVDK+AASGGYM+A A L+AAPFA IGSIG VP NV LK+ I + AG++K + +L + +E K EDL + H+ FK ++G R +D+E V TGE+W GR+A GL+DE+ TS+ YLA R+ V++V P
Sbjct: 92 AQEAARPRVWVLDFDGDLKASRTPQLAEQVSLLLGEL----QDDDEVVVRLTSGGGLVHAYGLASAQLDRLRDAGARLTVCVDKVAASGGYMMACCAHRLIAAPFAVIGSIGVVAQVP--NVHRLLKKHDIDVELLTAGRYKRTLTVL----GENTEEGRAKFLEDLRETHDLFKRYVGERRPALDIEKVATGEIWYGRQALDDGLIDEVNTSDGYLAARMEQARVLQVVLEP 314
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|1199199274|gb|OUR67785.1| (protease SohB [Bermanella sp. 47_1433_sub80_T6]) HSP 1 Score: 176.022 bits (445), Expect = 1.781e-45 Identity = 105/252 (41.67%), Postives = 150/252 (59.52%), Query Frame = 0
Query: 451 RPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVSPAPDARRFPGSFFLPGQGGGGRGGGAPL 702
+ + YV+ GD+ +Q + +S LL + G G E+V+ +ESGGG ++YG +A+QLER++++GI LTVCVDK+AASGGYM+AVVAD ++AAPFA +GSIG +P N LK+ I AG++K + + L G+ +A K R+DLA VH FK + R +VDV V G+VW G++A + LVDEI TS+EYL R + DV +S + + L Q G G+G A L
Sbjct: 85 KDKVYVLNFNGDIKAAQSEQMKDEISALLSL---GGGIAEIVVKVESGGGMVHQYGFAASQLERIKQSGIPLTVCVDKVAASGGYMMAVVADKIIAAPFAILGSIGVIAQLP--NFNRLLKKNDIDFEVHTAGEYKRT--LTLFGE--NTDKARDKFRDDLADVHTLFKDFVSERRSVVDVTKVANGDVWYGQKALEVNLVDEIQTSDEYLQKRCESADVYLLS-SEKKKNVMERLGLAAQAGVGKGIEAAL 326
BLAST of EWM30553.1 vs. NCBI_GenBank
Match: gi|1094260461|emb|SEI74122.1| (serine protease SohB [Pseudospirillum japonicum]) HSP 1 Score: 176.022 bits (445), Expect = 1.867e-45 Identity = 101/230 (43.91%), Postives = 139/230 (60.43%), Query Frame = 0
Query: 451 RPRAYVVTLKGDMLLSQGAYLTSVVSFLLEIARSGPGGDELVLLLESGGGAAYEYGLSAAQLERLRRAGIRLTVCVDKIAASGGYMLAVVADTLVAAPFATIGSIGATTSVPVLNVGVALKRLGIHAYSIKAGKHKGSGGMLLVGDAKGDQEALGKLREDLAKVHEAFKAHIGRWRKMVDVEAVGTGEVWQGREAKALGLVDEIMTSEEYLAWRLLTHDVVKVS---PAP 677
+ R +V+ GDM S +L +++ L R DE+V+ LESGGG + YGL+AAQLERLR+ ++LTVCVD +AASGGYM+A VADT+ AAPFA IGS+G VP N LK+ + + AG+HK + + L G+ E K EDL K HE FK + + R V+++ + TGEVW G+EA LGL+D + TS++YL R +V K+S P P
Sbjct: 89 KARVFVLEFDGDMQASGSEHLADLLTILSARIREQ---DEVVVCLESGGGYVHRYGLAAAQLERLRQQQVKLTVCVDAVAASGGYMMAAVADTIYAAPFALIGSVGVVAHVP--NFHRLLKKHEVDFEVLTAGEHKRT--LTLFGE--NTPEGRDKFIEDLQKTHELFKQFVQQKRPQVEIKKIATGEVWYGQEALNLGLIDGLQTSQQYLQTRCQEANVYKISLEKPQP 309 The following BLAST results are available for this feature:
BLAST of EWM30553.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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