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Properties
| Property Name | Value |
|---|
| Product | myb-like dna-binding protein |
| Orig transcript id | gnl|cribi|Naga_100033g47.8432.mrna |
| Orig protein id | gnl|cribi|Naga_100033g47.8432 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:318584..320983 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna121 ID=rna121|Name=rna121|organism=Nannochloropsis gaditana|type=mRNA|length=489bp
ATGCGTAGTTTTATACATGTGCTGGCGTTGGGCGGCTCGGATCGTCTGAT
GCCTGTGGTCAAATGCGTGTTCACTGCACGATTGATCGTGGAGGATGCGC
TCACGAAAGAAAAAGGCGGGACAGCAGGCACTTTGTTCCAGCCTGAAAGA
ATCCGCGTGTCGTTCTCCAAAAGGACAGGACGGAAAGGAAGGCGGGATCC
GGGAGAAGATATTTACAATGCAACCAGAGGTGGTGGATATCCTCTGGATC
GCCCATATACAGAGGCTGCATGTCAAGGACGTGTGGCGAGAGGCATGCGT
GTGGTTGCGAAGGTGTCTTTGAGCCCTTGTATGCCGAGAAAAGAGACCAA
ATCCGCGGAAATTAGAGGAAGAAGAATGAAAAACGGAAGGACGAGGCAGA
TAGCCGACGCGGGCCCTTGTTTGCTGGACAGGATTGATCGTGAAGCAACC
GATAATGGAAACAACATTGGAAGCGAGGAAGACTTCTAA back to topprotein sequence of rna121 >rna121-protein ID=rna121-protein|Name=rna121|organism=Nannochloropsis gaditana|type=polypeptide|length=640bp
MTQSDSETRSYNTFDDQRDNLPSISTAAPSTHYNPSSSVHHASRAPRDSA
PEGSWQTGREDIDSVKSDRSSTLVLSTAQKPHEKHRSSWLPFGADNLDSE
GGSSHTSSLTHDGTMVQQTSEVQDYDEAEGASPVHAGAAEAANKGFKKRA
WTPSEDGILRESVSSNGAKDWNYISSLLTERSAKQCCERWHNYLKPDIRR
DAWRPEEDKVILEFHRAFCNKWSKIAELLPGRTGNSVKNRYYCLLRRDKR
NASVSKGRSLQDAEGDRAAAQVQRDQMYLPRDRGPPHEIFSHQQGGCLPP
SPKAVQSLQMQAQQQHGYFGLSNSAFPAQDVARSLQSLGGRDSGRTPGGL
STSESLASFSAPHSSQQHPPFPTRQYHAENKAGGIEEGFPSGHAWDPSWG
QSTAAPSLDVSRSQQSHHQPIPAPGHYNLSNAQGHGGNAASFQNQAYYSS
TGQGLGPMPNVLPPFPPGPQAMLNFSAASRPRGGYQGAQGHTGSEEGKVP
STSMYAMHSAGSGMGVHGGYHQGTGAITDIRCPSSGGAQRPPLPGGSNAG
GEQHPSFLFQSMHSASMASPALHGCNESEGGHEIPRQWEGLRQEERMGSH
VDEMQDTLYGSNRGQSISNAQAGEGPGRDPPGGTDGYTVV back to topmRNA from alignment at CM002455.1:318584..320983- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna121 ID=rna121|Name=rna121|organism=Nannochloropsis gaditana|type=mRNA|length=2400bp|location=Sequence derived from alignment at CM002455.1:318584..320983- (Nannochloropsis gaditana)
ATGACCCAGAGCGACAGCGAGACAAGAAGTTACAACACGTTCGACGATCA
ACGCGACAACTTGCCGTCAATTTCTACTGCAGCCCCTTCCACCCACTACA
ATCCCTCCTCTAGCGTGCATCATGCCTCACGTGCTCCCCGCGACAGCGCT
CCCGAAGGCTCCTGGCAGACAGGGCGCGAAGATATCGACGTAAGCATCAT
GACCCTCAGAGGCGAAAGAGGGTGCAGGGCAAAGTATCTCGTGGCTCCTC
TTAGCATTACTTTTCCTGTCATTGATGTTTTTCAATTTCTACGGTCCGAG
GCCTAAGCGGTGTGTAATGCCAATCTCACACCTGTCTCCCGCACGTTCAA
CCACGTTTCAACAGAGCGTAAAGTCGGACCGTTCGAGTACACTTGTTCTG
TCCACGGCCCAAAAGCCGCACGAGAAGCATCGGTCTTCCTGGTTGCCGTT
TGGTGCGGACAACTTGGACAGCGAGGGAGGGAGCAGCCACACAAGCAGTC
TGACGCACGATGGGACGATGGTGCAACAGACTTCTGAAGTTCAGGTAGGT
CCACGCGTACAACTGGGTAAGAGGACGAATAGAGAGTGTTGCTGCTTCAT
GCGAGGGCGTGTGAGATGTCAAAGGGCGACGGCCTAACAAGGAGTGCTGT
AGCGACACCAGTCGCGGGAACCCTTCAGTGGCGCAATATTTTCTGTAGTC
TATGGATTGTTTTAAAAAAAAGCTTTCGATTGATTGTATAGGACATATAC
ATGTGTGAGCCAAGGTTGCAACTGCTTCTCTCAATTGTCTGAGCACCGTG
CTCCTTCCTCATACGCTGGCTCCTCCTGGGCGCCTCCCCTCTTTAGGACT
ACGACGAGGCCGAAGGCGCCAGTCCCGTCCACGCAGGCGCGGCGGAGGCA
GCGAACAAAGGGTTCAAGAAGCGAGCATGGACACCGAGCGAGGATGGGAT
TTTGCGGGAGTCGGTTTCAAGCAACGGCGCCAAGGATTGGAACTATATCT
CGTCTCTGTTGACAGAGCGGTCAGCCAAACAATGTTGTGAACGCTGGCAC
AACTACCTAAAGCCCGACATTCGAAGAGACGCCTGGCGGCCTGAGGAGGA
CAAAGTCATTCTGGAATTCCATCGCGCATTCTGCAACAAATGGAGCAAGA
TTGCCGAGCTTCTTCCGGGTCGGACAGGGAACTCGGTCAAGAACCGTTAC
TACTGTCTGCTGCGTCGGGACAAACGGAACGCGAGCGTGAGCAAAGGTCG
CTCCCTGCAGGATGCCGAAGGCGACCGAGCGGCCGCACAGGTGCAGCGGG
ACCAGATGTACTTGCCAAGAGACAGGGGCCCTCCCCATGAGATTTTCTCG
CATCAGCAGGGCGGCTGCCTCCCGCCCTCGCCAAAGGCCGTCCAGTCCCT
TCAAATGCAGGCCCAACAGCAGCATGGATATTTTGGCCTTTCCAACTCAG
CTTTCCCAGCGCAAGACGTGGCTCGATCGCTGCAATCGTTGGGAGGACGA
GACTCAGGTCGAACGCCGGGGGGCCTGTCCACGTCCGAGTCCTTAGCGTC
TTTCTCCGCGCCACATTCCTCGCAGCAACACCCTCCTTTCCCGACGAGGC
AATATCACGCCGAAAACAAGGCAGGGGGTATCGAGGAAGGTTTCCCAAGT
GGTCATGCCTGGGACCCGTCGTGGGGGCAGTCCACAGCCGCACCCTCTCT
CGACGTTAGCCGTTCACAGCAATCGCATCACCAGCCCATCCCCGCCCCGG
GACACTACAACCTGTCCAATGCTCAGGGTCATGGCGGCAACGCCGCCTCG
TTTCAGAACCAGGCCTACTACAGTAGCACGGGACAGGGCCTAGGCCCCAT
GCCCAACGTCCTGCCACCCTTCCCGCCGGGGCCCCAAGCCATGCTAAATT
TCAGTGCGGCCAGCAGGCCCAGGGGGGGGTACCAGGGTGCACAAGGACAC
ACGGGATCTGAGGAGGGAAAAGTGCCGAGCACATCCATGTACGCGATGCA
CTCGGCGGGGTCGGGCATGGGAGTGCACGGTGGCTATCACCAAGGCACAG
GAGCTATCACAGATATTCGGTGTCCCTCCAGCGGCGGTGCCCAAAGACCG
CCCCTTCCTGGGGGCAGCAACGCGGGAGGGGAGCAGCACCCGTCTTTTCT
TTTCCAATCTATGCATTCCGCGAGCATGGCGTCTCCGGCTCTACATGGCT
GCAACGAAAGCGAGGGCGGGCATGAGATACCGCGGCAATGGGAGGGCTTG
AGGCAGGAGGAACGGATGGGCAGCCACGTTGACGAGATGCAGGACACACT
GTACGGCAGCAACAGAGGTCAAAGCATCTCCAACGCCCAAGCCGGCGAGG
GGCCTGGCAGGGACCCCCCCGGTGGGACAGACGGGTACACGGTCGTCTAA
back to topCoding sequence (CDS) from alignment at CM002455.1:318584..320983- >rna121 ID=rna121|Name=rna121|organism=Nannochloropsis gaditana|type=CDS|length=5769bp|location=Sequence derived from alignment at CM002455.1:318584..320983- (Nannochloropsis gaditana)
GACTACGACGAGGCCGAAGGCGCCAGTCCCGTCCACGCAGGCGCGGCGGA
GGCAGCGAACAAAGGGTTCAAGAAGCGAGCATGGACACCGAGCGAGGATG
GGATTTTGCGGGAGTCGGTTTCAAGCAACGGCGCCAAGGATTGGAACTAT
ATCTCGTCTCTGTTGACAGAGCGGTCAGCCAAACAATGTTGTGAACGCTG
GCACAACTACCTAAAGCCCGACATTCGAAGAGACGCCTGGCGGCCTGAGG
AGGACAAAGTCATTCTGGAATTCCATCGCGCATTCTGCAACAAATGGAGC
AAGATTGCCGAGCTTCTTCCGGGTCGGACAGGGAACTCGGTCAAGAACCG
TTACTACTGTCTGCTGCGTCGGGACAAACGGAACGCGAGCGTGAGCAAAG
GTCGCTCCCTGCAGGATGCCGAAGGCGACCGAGCGGCCGCACAGGTGCAG
CGGGACCAGATGTACTTGCCAAGAGACAGGGGCCCTCCCCATGAGATTTT
CTCGCATCAGCAGGGCGGCTGCCTCCCGCCCTCGCCAAAGGCCGTCCAGT
CCCTTCAAATGCAGGCCCAACAGCAGCATGGATATTTTGGCCTTTCCAAC
TCAGCTTTCCCAGCGCAAGACGTGGCTCGATCGCTGCAATCGTTGGGAGG
ACGAGACTCAGGTCGAACGCCGGGGGGCCTGTCCACGTCCGAGTCCTTAG
CGTCTTTCTCCGCGCCACATTCCTCGCAGCAACACCCTCCTTTCCCGACG
AGGCAATATCACGCCGAAAACAAGGCAGGGGGTATCGAGGAAGGTTTCCC
AAGTGGTCATGCCTGGGACCCGTCGTGGGGGCAGTCCACAGCCGCACCCT
CTCTCGACGTTAGCCGTTCACAGCAATCGCATCACCAGCCCATCCCCGCC
CCGGGACACTACAACCTGTCCAATGCTCAGGGTCATGGCGGCAACGCCGC
CTCGTTTCAGAACCAGGCCTACTACAGTAGCACGGGACAGGGCCTAGGCC
CCATGCCCAACGTCCTGCCACCCTTCCCGCCGGGGCCCCAAGCCATGCTA
AATTTCAGTGCGGCCAGCAGGCCCAGGGGGGGGTACCAGGGTGCACAAGG
ACACACGGGATCTGAGGAGGGAAAAGTGCCGAGCACATCCATGTACGCGA
TGCACTCGGCGGGGTCGGGCATGGGAGTGCACGGTGGCTATCACCAAGGC
ACAGGAGCTATCACAGATATTCGGTGTCCCTCCAGCGGCGGTGCCCAAAG
ACCGCCCCTTCCTGGGGGCAGCAACGCGGGAGGGGAGCAGCACCCGTCTT
TTCTTTTCCAATCTATGCATTCCGCGAGCATGGCGTCTCCGGCTCTACAT
GGCTGCAACGAAAGCGAGGGCGGGCATGAGATACCGCGGCAATGGGAGGG
CTTGAGGCAGGAGGAACGGATGGGCAGCCACGTTGACGAGATGCAGGACA
CACTGTACGGCAGCAACAGAGGTCAAAGCATCTCCAACGCCCAAGCCGGC
GAGGGGCCTGGCAGGGACCCCCCCGGTGGGACAGACGGGTACACGGTCGT
CTAAAGCGTAAAGTCGGACCGTTCGAGTACACTTGTTCTGTCCACGGCCC
AAAAGCCGCACGAGAAGCATCGGTCTTCCTGGTTGCCGTTTGGTGCGGAC
AACTTGGACAGCGAGGGAGGGAGCAGCCACACAAGCAGTCTGACGCACGA
TGGGACGATGGTGCAACAGACTTCTGAAGTTCAGATGACCCAGAGCGACA
GCGAGACAAGAAGTTACAACACGTTCGACGATCAACGCGACAACTTGCCG
TCAATTTCTACTGCAGCCCCTTCCACCCACTACAATCCCTCCTCTAGCGT
GCATCATGCCTCACGTGCTCCCCGCGACAGCGCTCCCGAAGGCTCCTGGC
AGACAGGGCGCGAAGATATCGACGACTACGACGAGGCCGAAGGCGCCAGT
CCCGTCCACGCAGGCGCGGCGGAGGCAGCGAACAAAGGGTTCAAGAAGCG
AGCATGGACACCGAGCGAGGATGGGATTTTGCGGGAGTCGGTTTCAAGCA
ACGGCGCCAAGGATTGGAACTATATCTCGTCTCTGTTGACAGAGCGGTCA
GCCAAACAATGTTGTGAACGCTGGCACAACTACCTAAAGCCCGACATTCG
AAGAGACGCCTGGCGGCCTGAGGAGGACAAAGTCATTCTGGAATTCCATC
GCGCATTCTGCAACAAATGGAGCAAGATTGCCGAGCTTCTTCCGGGTCGG
ACAGGGAACTCGGTCAAGAACCGTTACTACTGTCTGCTGCGTCGGGACAA
ACGGAACGCGAGCGTGAGCAAAGGTCGCTCCCTGCAGGATGCCGAAGGCG
ACCGAGCGGCCGCACAGGTGCAGCGGGACCAGATGTACTTGCCAAGAGAC
AGGGGCCCTCCCCATGAGATTTTCTCGCATCAGCAGGGCGGCTGCCTCCC
GCCCTCGCCAAAGGCCGTCCAGTCCCTTCAAATGCAGGCCCAACAGCAGC
ATGGATATTTTGGCCTTTCCAACTCAGCTTTCCCAGCGCAAGACGTGGCT
CGATCGCTGCAATCGTTGGGAGGACGAGACTCAGGTCGAACGCCGGGGGG
CCTGTCCACGTCCGAGTCCTTAGCGTCTTTCTCCGCGCCACATTCCTCGC
AGCAACACCCTCCTTTCCCGACGAGGCAATATCACGCCGAAAACAAGGCA
GGGGGTATCGAGGAAGGTTTCCCAAGTGGTCATGCCTGGGACCCGTCGTG
GGGGCAGTCCACAGCCGCACCCTCTCTCGACGTTAGCCGTTCACAGCAAT
CGCATCACCAGCCCATCCCCGCCCCGGGACACTACAACCTGTCCAATGCT
CAGGGTCATGGCGGCAACGCCGCCTCGTTTCAGAACCAGGCCTACTACAG
TAGCACGGGACAGGGCCTAGGCCCCATGCCCAACGTCCTGCCACCCTTCC
CGCCGGGGCCCCAAGCCATGCTAAATTTCAGTGCGGCCAGCAGGCCCAGG
GGGGGGTACCAGGGTGCACAAGGACACACGGGATCTGAGGAGGGAAAAGT
GCCGAGCACATCCATGTACGCGATGCACTCGGCGGGGTCGGGCATGGGAG
TGCACGGTGGCTATCACCAAGGCACAGGAGCTATCACAGATATTCGGTGT
CCCTCCAGCGGCGGTGCCCAAAGACCGCCCCTTCCTGGGGGCAGCAACGC
GGGAGGGGAGCAGCACCCGTCTTTTCTTTTCCAATCTATGCATTCCGCGA
GCATGGCGTCTCCGGCTCTACATGGCTGCAACGAAAGCGAGGGCGGGCAT
GAGATACCGCGGCAATGGGAGGGCTTGAGGCAGGAGGAACGGATGGGCAG
CCACGTTGACGAGATGCAGGACACACTGTACGGCAGCAACAGAGGTCAAA
GCATCTCCAACGCCCAAGCCGGCGAGGGGCCTGGCAGGGACCCCCCCGGT
GGGACAGACGGGTACACGGTCGTCTAAAGCGTAAAGTCGGACCGTTCGAG
TACACTTGTTCTGTCCACGGCCCAAAAGCCGCACGAGAAGCATCGGTCTT
CCTGGTTGCCGTTTGGTGCGGACAACTTGGACAGCGAGGGAGGGAGCAGC
CACACAAGCAGTCTGACGCACGATGGGACGATGGTGCAACAGACTTCTGA
AGTTCAGATGACCCAGAGCGACAGCGAGACAAGAAGTTACAACACGTTCG
ACGATCAACGCGACAACTTGCCGTCAATTTCTACTGCAGCCCCTTCCACC
CACTACAATCCCTCCTCTAGCGTGCATCATGCCTCACGTGCTCCCCGCGA
CAGCGCTCCCGAAGGCTCCTGGCAGACAGGGCGCGAAGATATCGACGACT
ACGACGAGGCCGAAGGCGCCAGTCCCGTCCACGCAGGCGCGGCGGAGGCA
GCGAACAAAGGGTTCAAGAAGCGAGCATGGACACCGAGCGAGGATGGGAT
TTTGCGGGAGTCGGTTTCAAGCAACGGCGCCAAGGATTGGAACTATATCT
CGTCTCTGTTGACAGAGCGGTCAGCCAAACAATGTTGTGAACGCTGGCAC
AACTACCTAAAGCCCGACATTCGAAGAGACGCCTGGCGGCCTGAGGAGGA
CAAAGTCATTCTGGAATTCCATCGCGCATTCTGCAACAAATGGAGCAAGA
TTGCCGAGCTTCTTCCGGGTCGGACAGGGAACTCGGTCAAGAACCGTTAC
TACTGTCTGCTGCGTCGGGACAAACGGAACGCGAGCGTGAGCAAAGGTCG
CTCCCTGCAGGATGCCGAAGGCGACCGAGCGGCCGCACAGGTGCAGCGGG
ACCAGATGTACTTGCCAAGAGACAGGGGCCCTCCCCATGAGATTTTCTCG
CATCAGCAGGGCGGCTGCCTCCCGCCCTCGCCAAAGGCCGTCCAGTCCCT
TCAAATGCAGGCCCAACAGCAGCATGGATATTTTGGCCTTTCCAACTCAG
CTTTCCCAGCGCAAGACGTGGCTCGATCGCTGCAATCGTTGGGAGGACGA
GACTCAGGTCGAACGCCGGGGGGCCTGTCCACGTCCGAGTCCTTAGCGTC
TTTCTCCGCGCCACATTCCTCGCAGCAACACCCTCCTTTCCCGACGAGGC
AATATCACGCCGAAAACAAGGCAGGGGGTATCGAGGAAGGTTTCCCAAGT
GGTCATGCCTGGGACCCGTCGTGGGGGCAGTCCACAGCCGCACCCTCTCT
CGACGTTAGCCGTTCACAGCAATCGCATCACCAGCCCATCCCCGCCCCGG
GACACTACAACCTGTCCAATGCTCAGGGTCATGGCGGCAACGCCGCCTCG
TTTCAGAACCAGGCCTACTACAGTAGCACGGGACAGGGCCTAGGCCCCAT
GCCCAACGTCCTGCCACCCTTCCCGCCGGGGCCCCAAGCCATGCTAAATT
TCAGTGCGGCCAGCAGGCCCAGGGGGGGGTACCAGGGTGCACAAGGACAC
ACGGGATCTGAGGAGGGAAAAGTGCCGAGCACATCCATGTACGCGATGCA
CTCGGCGGGGTCGGGCATGGGAGTGCACGGTGGCTATCACCAAGGCACAG
GAGCTATCACAGATATTCGGTGTCCCTCCAGCGGCGGTGCCCAAAGACCG
CCCCTTCCTGGGGGCAGCAACGCGGGAGGGGAGCAGCACCCGTCTTTTCT
TTTCCAATCTATGCATTCCGCGAGCATGGCGTCTCCGGCTCTACATGGCT
GCAACGAAAGCGAGGGCGGGCATGAGATACCGCGGCAATGGGAGGGCTTG
AGGCAGGAGGAACGGATGGGCAGCCACGTTGACGAGATGCAGGACACACT
GTACGGCAGCAACAGAGGTCAAAGCATCTCCAACGCCCAAGCCGGCGAGG
GGCCTGGCAGGGACCCCCCCGGTGGGACAGACGGGTACACGGTCGTCTAA
AGCGTAAAGTCGGACCGTTCGAGTACACTTGTTCTGTCCACGGCCCAAAA
GCCGCACGAGAAGCATCGGTCTTCCTGGTTGCCGTTTGGTGCGGACAACT
TGGACAGCGAGGGAGGGAGCAGCCACACAAGCAGTCTGACGCACGATGGG
ACGATGGTGCAACAGACTTCTGAAGTTCAGATGACCCAGAGCGACAGCGA
GACAAGAAGTTACAACACGTTCGACGATCAACGCGACAACTTGCCGTCAA
TTTCTACTGCAGCCCCTTCCACCCACTACAATCCCTCCTCTAGCGTGCAT
CATGCCTCACGTGCTCCCCGCGACAGCGCTCCCGAAGGCTCCTGGCAGAC
AGGGCGCGAAGATATCGAC back to top
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