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Properties
| Property Name | Value |
|---|
| Product | Bestrophin-like protein |
| Orig transcript id | gnl|cribi|Naga_100006g16.8706.mrna |
| Orig protein id | gnl|cribi|Naga_100006g16.8706 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1314718..1316739 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1152 ID=rna1152|Name=rna1152|organism=Nannochloropsis gaditana|type=mRNA|length=258bp
ATGCATACAGTGGAGAAGAAACTTGATGCGAGGAGAGGAGAAAACAAGAT
ATTAGTTGTCTATGGCCATGTGAATCTTAATGAAATCCGTCTTATGCTTC
TGTTCCCTCAGAATTTCCTTTTGAAAGCAACCAGAGCGGCAAACCTGCAG
TATATTTTCGACCCAATAAGGGACATAGTAAAGAGTGTAGAACATTGTGA
AATGCTCGCAGCCAAGGAAGTCTTACCCGGAGAACAGAAAAGACTTCTAT
CAGCCTAA back to topprotein sequence of rna1152 >rna1152-protein ID=rna1152-protein|Name=rna1152|organism=Nannochloropsis gaditana|type=polypeptide|length=492bp
MALTEDYSAFLGLDRMDIAGNAPHDFLHQLHMRGAEHEKRISEVSLSPIL
PSLATKSTICCVRRRRRRAMSSVPPRGQVLVAAHLVFFCLVSCASSIALI
FPFHAASSSFTRQHVMFRPHNCHSNPSVNHFVNHIGCRRAKSHVTALLDP
PQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWH
IGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLA
RTGRIALDQRYHARFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWEADQ
VRMDTCPPALVCMKLTYLINEAVSHNEARSDFYALYLEQLVGDLVNCLGM
AERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWG
LFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGLKAGFDVTFP
LDENLLSPDDWKLAENGPQSALASSISTLSPIEDATSKRTGI back to topmRNA from alignment at CM002456.1:1314718..1316739- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1152 ID=rna1152|Name=rna1152|organism=Nannochloropsis gaditana|type=mRNA|length=2022bp|location=Sequence derived from alignment at CM002456.1:1314718..1316739- (Nannochloropsis gaditana)
ATGGCTTTGACTGAAGATTACTCAGCATTTCTCGGCCTTGACAGGATGGA
CATCGCAGGCAATGCACCGCACGACTTCCTGCATCAATTACACATGCGAG
GCGCCGAGCATGAAAAGCGTATCAGCGAGGTTTCTTTGTCACCAATACTT
CCCTCCTTGGCTACGAAGAGCACAATTTGTTGCGTGCGAAGAAGAAGAAG
AAGAGCAATGAGCAGCGTACCTCCCCGTGGCCAGGTCTTGGTCGCAGCTC
ACCTCGTATTTTTCTGCCTTGTCAGTTGCGCCTCCTCGATCGCATTGATA
TTTCCATTTCATGCAGCCAGCTCCTCCTTTACGCGTCAGCACGTAATGTT
CCGGCCTCATAATTGTCATTCCAATCCCTCTGTCAATCACTTTGTGAACC
ACATTGGCTGTCGACGTGCAAAGTCCCACGTTACGGCCCTCCTCGATCCG
CCCCAACGGTATAAATCGTCAGACTGGGCGGAGAACTTACGTTCCCTCTT
CGACTCCCGCATTGTGAAACGGATCTCTGGGCACTTACTCTTTAACACTG
CCTGGGCAACTGGAGTAACGGGAGTCTACGAGAGCATGCCCCAATGGCAC
ATCGGCTCCGACATATCTCCCGTTCCTCACCAACTCATGTCTACCGCCTT
AGGCCTCTTGCTTGTGTTTCGGACCAAGTAAGAAGCGCATCCGAAAGTTG
TCTGTGAAGGAGGGAAAATTGGTTCGGGTTTTGGAGATTGCTCCTTGCCC
TCCGGACTGTCCTTCATGTTCTCACCAGTCACTTTTGTCTCTCCTTCCTC
TTCCCCGATTCCACAGCGCCGCTTATGATCGTTTTTGGGAGGCGCGTAAG
GTATGGGGTAGCGTCACAAATATATGCCGAAATCTAGCCCGTACAGGGCG
CATTGCTTTGGATCAACGGTACCACGCCCGCTTTTCGATGCTGATTATTG
CCTTTGCAGTCACCTTGCGCGCCCATCTGCAACGCAACATAGTGTCCACC
GAGTTGGAAACCCTTTTACCTTCTTGGGAGGCGGATCAAGTTAGGATGGA
TACGTGTCCGCCTGCCCTGGTCTGTATGAAACTGACTTACTTGATTAATG
AAGCGGTCAGTCACAATGAGGCCCGGTCGGACTTCTATGCTTTGTATTTA
GAGCAGCTTGTTGGTGACCTCGTCAATTGCTTAGGTAAGTGCAAACAGAG
GAGCAGCCGGTGGGAGGACGAGCTGTCGACATCATTGATTTGCGTGAATA
GTCTAACCATCTTCTTCTTGTAGTTCATCCACCTCTCCTCCCCATGTTTA
TCTTTTTTGATGTTCTACAGGCATGGCCGAACGGATCCTCCTTACACCCG
TCCCTGCCTCCTATTCCCGCCACACTTCCCGTTTTTTGTCCCTCTACACG
CTCACACTCCCATTTGTCCTCGTCCATCAACTGGAAATTTTCACCGCGCC
AGTGCTAGGCATTGTCTGTTGGGGGCTCTTTTCTATGTACGCCACATGGG
GAGAGAAAAAAGGAGGGCATCATCCAAGTGGTTGAACCTTTGTGAAGCGG
GATATAGTTTAGAAAATGTCGGTTTTTTGCTTAAAGAGATTACTTGTATC
GATATGCCCGATTTCTTGAATATCTTTCGTGGGCTTGTGGAAATTGAAAT
GCATTCGAAGGCGCTTGGCGTAAAATTATGATTTTTGCAGATAATTGTAC
AATCTCGATTATCTAATATTATCATATCATTCTATTTTTTCTCCTAATAA
CCAGCGAGGAGATCGGACATCTGATTGAGGAGCCCTTTTGTGCAAGCACC
AAACAGTTGCCTTTAATTTCTATGACTGAGACGATCGCCCGCGATGTCAA
ACACCTCCTCGGATTAAAGGCGGGTTTTGATGTTACTTTTCCTTTGGATG
AGAATCTTTTGTCGCCGGATGACTGGAAGCTCGCAGAAAATGGGCCCCAG
TCCGCCTTGGCATCTTCCATTTCGACACTTTCGCCGATAGAAGACGCTAC
GTCAAAAAGAACAGGAATATAA back to topCoding sequence (CDS) from alignment at CM002456.1:1314718..1316739- >rna1152 ID=rna1152|Name=rna1152|organism=Nannochloropsis gaditana|type=CDS|length=5916bp|location=Sequence derived from alignment at CM002456.1:1314718..1316739- (Nannochloropsis gaditana)
CGAGGAGATCGGACATCTGATTGAGGAGCCCTTTTGTGCAAGCACCAAAC
AGTTGCCTTTAATTTCTATGACTGAGACGATCGCCCGCGATGTCAAACAC
CTCCTCGGATTAAAGGCGGGTTTTGATGTTACTTTTCCTTTGGATGAGAA
TCTTTTGTCGCCGGATGACTGGAAGCTCGCAGAAAATGGGCCCCAGTCCG
CCTTGGCATCTTCCATTTCGACACTTTCGCCGATAGAAGACGCTACGTCA
AAAAGAACAGGAATATAAGCATGGCCGAACGGATCCTCCTTACACCCGTC
CCTGCCTCCTATTCCCGCCACACTTCCCGTTTTTTGTCCCTCTACACGCT
CACACTCCCATTTGTCCTCGTCCATCAACTGGAAATTTTCACCGCGCCAG
TGCTAGGCATTGTCTGTTGGGGGCTCTTTTCTATCGCCGCTTATGATCGT
TTTTGGGAGGCGCGTAAGGTATGGGGTAGCGTCACAAATATATGCCGAAA
TCTAGCCCGTACAGGGCGCATTGCTTTGGATCAACGGTACCACGCCCGCT
TTTCGATGCTGATTATTGCCTTTGCAGTCACCTTGCGCGCCCATCTGCAA
CGCAACATAGTGTCCACCGAGTTGGAAACCCTTTTACCTTCTTGGGAGGC
GGATCAAGTTAGGATGGATACGTGTCCGCCTGCCCTGGTCTGTATGAAAC
TGACTTACTTGATTAATGAAGCGGTCAGTCACAATGAGGCCCGGTCGGAC
TTCTATGCTTTGTATTTAGAGCAGCTTGTTGGTGACCTCGTCAATTGCTT
AGATGGCTTTGACTGAAGATTACTCAGCATTTCTCGGCCTTGACAGGATG
GACATCGCAGGCAATGCACCGCACGACTTCCTGCATCAATTACACATGCG
AGGCGCCGAGCATGAAAAGCGTATCAGCGAGGTTTCTTTGTCACCAATAC
TTCCCTCCTTGGCTACGAAGAGCACAATTTGTTGCGTGCGAAGAAGAAGA
AGAAGAGCAATGAGCAGCGTACCTCCCCGTGGCCAGGTCTTGGTCGCAGC
TCACCTCGTATTTTTCTGCCTTGTCAGTTGCGCCTCCTCGATCGCATTGA
TATTTCCATTTCATGCAGCCAGCTCCTCCTTTACGCGTCAGCACGTAATG
TTCCGGCCTCATAATTGTCATTCCAATCCCTCTGTCAATCACTTTGTGAA
CCACATTGGCTGTCGACGTGCAAAGTCCCACGTTACGGCCCTCCTCGATC
CGCCCCAACGGTATAAATCGTCAGACTGGGCGGAGAACTTACGTTCCCTC
TTCGACTCCCGCATTGTGAAACGGATCTCTGGGCACTTACTCTTTAACAC
TGCCTGGGCAACTGGAGTAACGGGAGTCTACGAGAGCATGCCCCAATGGC
ACATCGGCTCCGACATATCTCCCGTTCCTCACCAACTCATGTCTACCGCC
TTAGGCCTCTTGCTTGTGTTTCGGACCAACGAGGAGATCGGACATCTGAT
TGAGGAGCCCTTTTGTGCAAGCACCAAACAGTTGCCTTTAATTTCTATGA
CTGAGACGATCGCCCGCGATGTCAAACACCTCCTCGGATTAAAGGCGGGT
TTTGATGTTACTTTTCCTTTGGATGAGAATCTTTTGTCGCCGGATGACTG
GAAGCTCGCAGAAAATGGGCCCCAGTCCGCCTTGGCATCTTCCATTTCGA
CACTTTCGCCGATAGAAGACGCTACGTCAAAAAGAACAGGAATATAAGCA
TGGCCGAACGGATCCTCCTTACACCCGTCCCTGCCTCCTATTCCCGCCAC
ACTTCCCGTTTTTTGTCCCTCTACACGCTCACACTCCCATTTGTCCTCGT
CCATCAACTGGAAATTTTCACCGCGCCAGTGCTAGGCATTGTCTGTTGGG
GGCTCTTTTCTATCGCCGCTTATGATCGTTTTTGGGAGGCGCGTAAGGTA
TGGGGTAGCGTCACAAATATATGCCGAAATCTAGCCCGTACAGGGCGCAT
TGCTTTGGATCAACGGTACCACGCCCGCTTTTCGATGCTGATTATTGCCT
TTGCAGTCACCTTGCGCGCCCATCTGCAACGCAACATAGTGTCCACCGAG
TTGGAAACCCTTTTACCTTCTTGGGAGGCGGATCAAGTTAGGATGGATAC
GTGTCCGCCTGCCCTGGTCTGTATGAAACTGACTTACTTGATTAATGAAG
CGGTCAGTCACAATGAGGCCCGGTCGGACTTCTATGCTTTGTATTTAGAG
CAGCTTGTTGGTGACCTCGTCAATTGCTTAGATGGCTTTGACTGAAGATT
ACTCAGCATTTCTCGGCCTTGACAGGATGGACATCGCAGGCAATGCACCG
CACGACTTCCTGCATCAATTACACATGCGAGGCGCCGAGCATGAAAAGCG
TATCAGCGAGGTTTCTTTGTCACCAATACTTCCCTCCTTGGCTACGAAGA
GCACAATTTGTTGCGTGCGAAGAAGAAGAAGAAGAGCAATGAGCAGCGTA
CCTCCCCGTGGCCAGGTCTTGGTCGCAGCTCACCTCGTATTTTTCTGCCT
TGTCAGTTGCGCCTCCTCGATCGCATTGATATTTCCATTTCATGCAGCCA
GCTCCTCCTTTACGCGTCAGCACGTAATGTTCCGGCCTCATAATTGTCAT
TCCAATCCCTCTGTCAATCACTTTGTGAACCACATTGGCTGTCGACGTGC
AAAGTCCCACGTTACGGCCCTCCTCGATCCGCCCCAACGGTATAAATCGT
CAGACTGGGCGGAGAACTTACGTTCCCTCTTCGACTCCCGCATTGTGAAA
CGGATCTCTGGGCACTTACTCTTTAACACTGCCTGGGCAACTGGAGTAAC
GGGAGTCTACGAGAGCATGCCCCAATGGCACATCGGCTCCGACATATCTC
CCGTTCCTCACCAACTCATGTCTACCGCCTTAGGCCTCTTGCTTGTGTTT
CGGACCAACGAGGAGATCGGACATCTGATTGAGGAGCCCTTTTGTGCAAG
CACCAAACAGTTGCCTTTAATTTCTATGACTGAGACGATCGCCCGCGATG
TCAAACACCTCCTCGGATTAAAGGCGGGTTTTGATGTTACTTTTCCTTTG
GATGAGAATCTTTTGTCGCCGGATGACTGGAAGCTCGCAGAAAATGGGCC
CCAGTCCGCCTTGGCATCTTCCATTTCGACACTTTCGCCGATAGAAGACG
CTACGTCAAAAAGAACAGGAATATAAGCATGGCCGAACGGATCCTCCTTA
CACCCGTCCCTGCCTCCTATTCCCGCCACACTTCCCGTTTTTTGTCCCTC
TACACGCTCACACTCCCATTTGTCCTCGTCCATCAACTGGAAATTTTCAC
CGCGCCAGTGCTAGGCATTGTCTGTTGGGGGCTCTTTTCTATCGCCGCTT
ATGATCGTTTTTGGGAGGCGCGTAAGGTATGGGGTAGCGTCACAAATATA
TGCCGAAATCTAGCCCGTACAGGGCGCATTGCTTTGGATCAACGGTACCA
CGCCCGCTTTTCGATGCTGATTATTGCCTTTGCAGTCACCTTGCGCGCCC
ATCTGCAACGCAACATAGTGTCCACCGAGTTGGAAACCCTTTTACCTTCT
TGGGAGGCGGATCAAGTTAGGATGGATACGTGTCCGCCTGCCCTGGTCTG
TATGAAACTGACTTACTTGATTAATGAAGCGGTCAGTCACAATGAGGCCC
GGTCGGACTTCTATGCTTTGTATTTAGAGCAGCTTGTTGGTGACCTCGTC
AATTGCTTAGATGGCTTTGACTGAAGATTACTCAGCATTTCTCGGCCTTG
ACAGGATGGACATCGCAGGCAATGCACCGCACGACTTCCTGCATCAATTA
CACATGCGAGGCGCCGAGCATGAAAAGCGTATCAGCGAGGTTTCTTTGTC
ACCAATACTTCCCTCCTTGGCTACGAAGAGCACAATTTGTTGCGTGCGAA
GAAGAAGAAGAAGAGCAATGAGCAGCGTACCTCCCCGTGGCCAGGTCTTG
GTCGCAGCTCACCTCGTATTTTTCTGCCTTGTCAGTTGCGCCTCCTCGAT
CGCATTGATATTTCCATTTCATGCAGCCAGCTCCTCCTTTACGCGTCAGC
ACGTAATGTTCCGGCCTCATAATTGTCATTCCAATCCCTCTGTCAATCAC
TTTGTGAACCACATTGGCTGTCGACGTGCAAAGTCCCACGTTACGGCCCT
CCTCGATCCGCCCCAACGGTATAAATCGTCAGACTGGGCGGAGAACTTAC
GTTCCCTCTTCGACTCCCGCATTGTGAAACGGATCTCTGGGCACTTACTC
TTTAACACTGCCTGGGCAACTGGAGTAACGGGAGTCTACGAGAGCATGCC
CCAATGGCACATCGGCTCCGACATATCTCCCGTTCCTCACCAACTCATGT
CTACCGCCTTAGGCCTCTTGCTTGTGTTTCGGACCAACGAGGAGATCGGA
CATCTGATTGAGGAGCCCTTTTGTGCAAGCACCAAACAGTTGCCTTTAAT
TTCTATGACTGAGACGATCGCCCGCGATGTCAAACACCTCCTCGGATTAA
AGGCGGGTTTTGATGTTACTTTTCCTTTGGATGAGAATCTTTTGTCGCCG
GATGACTGGAAGCTCGCAGAAAATGGGCCCCAGTCCGCCTTGGCATCTTC
CATTTCGACACTTTCGCCGATAGAAGACGCTACGTCAAAAAGAACAGGAA
TATAAGCATGGCCGAACGGATCCTCCTTACACCCGTCCCTGCCTCCTATT
CCCGCCACACTTCCCGTTTTTTGTCCCTCTACACGCTCACACTCCCATTT
GTCCTCGTCCATCAACTGGAAATTTTCACCGCGCCAGTGCTAGGCATTGT
CTGTTGGGGGCTCTTTTCTATCGCCGCTTATGATCGTTTTTGGGAGGCGC
GTAAGGTATGGGGTAGCGTCACAAATATATGCCGAAATCTAGCCCGTACA
GGGCGCATTGCTTTGGATCAACGGTACCACGCCCGCTTTTCGATGCTGAT
TATTGCCTTTGCAGTCACCTTGCGCGCCCATCTGCAACGCAACATAGTGT
CCACCGAGTTGGAAACCCTTTTACCTTCTTGGGAGGCGGATCAAGTTAGG
ATGGATACGTGTCCGCCTGCCCTGGTCTGTATGAAACTGACTTACTTGAT
TAATGAAGCGGTCAGTCACAATGAGGCCCGGTCGGACTTCTATGCTTTGT
ATTTAGAGCAGCTTGTTGGTGACCTCGTCAATTGCTTAGATGGCTTTGAC
TGAAGATTACTCAGCATTTCTCGGCCTTGACAGGATGGACATCGCAGGCA
ATGCACCGCACGACTTCCTGCATCAATTACACATGCGAGGCGCCGAGCAT
GAAAAGCGTATCAGCGAGGTTTCTTTGTCACCAATACTTCCCTCCTTGGC
TACGAAGAGCACAATTTGTTGCGTGCGAAGAAGAAGAAGAAGAGCAATGA
GCAGCGTACCTCCCCGTGGCCAGGTCTTGGTCGCAGCTCACCTCGTATTT
TTCTGCCTTGTCAGTTGCGCCTCCTCGATCGCATTGATATTTCCATTTCA
TGCAGCCAGCTCCTCCTTTACGCGTCAGCACGTAATGTTCCGGCCTCATA
ATTGTCATTCCAATCCCTCTGTCAATCACTTTGTGAACCACATTGGCTGT
CGACGTGCAAAGTCCCACGTTACGGCCCTCCTCGATCCGCCCCAACGGTA
TAAATCGTCAGACTGGGCGGAGAACTTACGTTCCCTCTTCGACTCCCGCA
TTGTGAAACGGATCTCTGGGCACTTACTCTTTAACACTGCCTGGGCAACT
GGAGTAACGGGAGTCTACGAGAGCATGCCCCAATGGCACATCGGCTCCGA
CATATCTCCCGTTCCTCACCAACTCATGTCTACCGCCTTAGGCCTCTTGC
TTGTGTTTCGGACCAA back to top
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