EWM29617.1, cds1151 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|585112188|gb|EWM29617.1| (Bestrophin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1016.53 bits (2627), Expect = 0.000e+0 Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0
Query: 1 MALTEDYSAFLGLDRMDIAGNAPHDFLHQLHMRGAEHEKRISEVSLSPILPSLATKSTICCVRRRRRRAMSSVPPRGQVLVAAHLVFFCLVSCASSIALIFPFHAASSSFTRQHVMFRPHNCHSNPSVNHFVNHIGCRRAKSHVTALLDPPQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRYHARFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGLKAGFDVTFPLDENLLSPDDWKLAENGPQSALASSISTLSPIEDATSKRTGI 492
MALTEDYSAFLGLDRMDIAGNAPHDFLHQLHMRGAEHEKRISEVSLSPILPSLATKSTICCVRRRRRRAMSSVPPRGQVLVAAHLVFFCLVSCASSIALIFPFHAASSSFTRQHVMFRPHNCHSNPSVNHFVNHIGCRRAKSHVTALLDPPQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRYHARFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGLKAGFDVTFPLDENLLSPDDWKLAENGPQSALASSISTLSPIEDATSKRTGI
Sbjct: 1 MALTEDYSAFLGLDRMDIAGNAPHDFLHQLHMRGAEHEKRISEVSLSPILPSLATKSTICCVRRRRRRAMSSVPPRGQVLVAAHLVFFCLVSCASSIALIFPFHAASSSFTRQHVMFRPHNCHSNPSVNHFVNHIGCRRAKSHVTALLDPPQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRYHARFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGLKAGFDVTFPLDENLLSPDDWKLAENGPQSALASSISTLSPIEDATSKRTGI 492
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|873238098|emb|CEL96461.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 241.506 bits (615), Expect = 6.283e-71 Identity = 133/307 (43.32%), Postives = 184/307 (59.93%), Query Frame = 0
Query: 152 QRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRYHARFSMLIIAFAVTLRAHLQRNIVS-TELETLLPSWEADQVRMDTCPPALVCMKLTYLINEA--VSHNEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGL------KAGFDVTF 449
+RY S DW E L ++ SRI+KRI G LL TAW+ +T ++ P+ + + S +PH LMS A+GLLLVFRTNAAYDR+WE RK+WG V + CR LA L + R + LI +F ++ HLQ V E+ + +A+ +R PP L+C ++ +EA VS + ++ ++LE ++G L LG ERI+ TPVP SYSRHTSRFL+LY LTLP VLV L+ T PV+ +CWG +IEEIGH IE+PF ++ QLPL ETI D++ + + G +V F
Sbjct: 50 RRYSSEDWLECLTTVPLSRILKRIRGFLLVTTAWSVFITTLFAVAPKLSLFALSSSLPHSLMSGAMGLLLVFRTNAAYDRYWEGRKLWGKVISTCRELATASLFYLPIPFQYRLANLIRSFPFLMKQHLQGGEVDMAEVSRWITPNDAEALRQVRNPPLLICKLMSGTCHEAMEVSRDTKPTERQLIWLENIIGHLSEALGGCERIMKTPVPLSYSRHTSRFLTLYCLTLPVVLVQSLQWMTIPVVTFMCWGFKAIEEIGHFIEDPFDKASFQLPLKGFCETIQADIEDTMDIPYVPLTNHGMEVNF 356
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|299116819|emb|CBN74931.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 221.476 bits (563), Expect = 4.066e-65 Identity = 123/279 (44.09%), Postives = 167/279 (59.86%), Query Frame = 0
Query: 153 RYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSD--ISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIAL--DQRYHARFSMLIIAFAVTLRAHLQRNIVSTELE-TLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNEA-----------RSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPF 415
+ K +DW N+++L SR++ I HL +NTA+A V+ V+ PQ HI D +SP+PH +MS ALGLLLVFRTNAAY+RFWEAR++WG + N CRN+AR +AL D + + L+ HLQ E++ + LP +++ D PP C + ++ A S A S Y + +E+ + LV+ LG ERI+ TPVP YSRHTSRFL++Y TLP VLV E+FTAPV+ VCWGLFSIEEI + IE+PF
Sbjct: 3 KKKKNDWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQ-HIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARQIWGGLINQCRNIARLSTVALGPDSPEWLEMKEYLRLYPFLLKQHLQDERDDAEMDWSRLPEGTVARLQEDPNPPLYCCQIMMEILARACSEGGAAQSPGGRVPDYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPF 280
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|375332111|gb|AFA52595.1| (hypothetical protein [Vaucheria litorea]) HSP 1 Score: 220.32 bits (560), Expect = 2.195e-63 Identity = 124/298 (41.61%), Postives = 187/298 (62.75%), Query Frame = 0
Query: 154 YKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGS-DISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALD-QRYHARFSMLIIAFAVTLRAHLQRNIVSTELETL---LPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNEARSD---FYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGLKA 443
+ S+DW +N+++L S+I K I+ HL FNT WA +T ++ PQ +I IS VP LM++AL LLL+FR NAAYDRFWE+RKVWG++TN RNLAR G+I +D + + + + ++ L+ HLQ EL+ L LP +E + ++ + PP LV +++ ++ + S FY + +E+ + L +C+G+ ERIL TPVP SYSRHTSR L+++ LTLP VLV E T V+ ++ WG+ SIE I +LIE+PF A+ QLP+I+ + R+V ++ K+
Sbjct: 58 FASNDWLDNIKNLPASKINKDITSHLWFNTGWAVLITCIHMFTPQHYIDDFHISTVPQTLMASALSLLLIFRNNAAYDRFWESRKVWGAITNTVRNLARLGKITIDDEEVLSLYKDYLRSYPFLLKQHLQNTRNDEELDWLKARLPKYEFENIQSNPNPPLLVLQRMSQILGTLFPPSSKPSQAKVFYRIKIEECINLLSDCVGLCERILNTPVPRSYSRHTSRLLTVFLLTLPIVLVPHTEFGTPLVVLLMGWGMLSIEGIAYLIEQPFDATNNQLPMINYCNNLFRNVDFIVSEKS 355
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|545713600|ref|XP_005709103.1| (hypothetical protein Gasu_03530 [Galdieria sulphuraria] >gi|452825587|gb|EME32583.1| hypothetical protein Gasu_03530 [Galdieria sulphuraria]) HSP 1 Score: 189.504 bits (480), Expect = 4.546e-52 Identity = 120/334 (35.93%), Postives = 165/334 (49.40%), Query Frame = 0
Query: 136 GCRRAKSHVT----ALLDPPQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALD----QRYHARFSMLIIAFAVTLRAHLQRNIVSTELETLL---PSWE----------ADQVRMDTCPPALVCMKLTYLINEAVSHNEARSDFYA--LYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGLKAGFD 446
G R +SH+ L +RY SSDW+ L SL S I+ RI HL W V+ + + +P+PH L+ +A+GLLLVFRTNAAYDRFWEARK+ G + R + R + Q R ML+ F V H+Q ++ P + AD++ PP V +L+ I A SD+ +E + L+ L ERI+ TPVP YSRHTSRFLSL+ T P ++V + T PV VCW LF+IEEIGH+IE+PF T++LP+ SM ++ DV ++ L F
Sbjct: 32 GFRLLRSHLKLNLCCSLKRAERYTSSDWSRCLLSLPKSIILSRIRSHLF----WTCCVSFLVSLFDHFFKVPPFNPIPHTLLGSAMGLLLVFRTNAAYDRFWEARKLVGVLAVQSREMTRCIHSYFNEEKFQVIKIRLVMLLKLFLVAFLQHVQGTADVVSFRKMIRSNPEYSDSSSHFVDIFADEIVHSPNPPLFVLFQLSMQIKAAFRETTNVSDWVVQRAKMEWQLSSLMEVLSGCERIITTPVPLGYSRHTSRFLSLWCFTFPLLVVSHFKFLTVPVTAFVCWSLFAIEEIGHVIEDPFLEGTQKLPIKSMISSLLADVDYVNHLPVFFS 361
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|873240746|emb|CEL93106.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 190.66 bits (483), Expect = 5.596e-52 Identity = 125/358 (34.92%), Postives = 168/358 (46.93%), Query Frame = 0
Query: 111 TRQHVMFRPHNCHSNPSVNHFVNHIGCRRAKSHVTALLDPPQ---------------RYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRYHARFSMLIIAFAVTLRAHL---QRNIVST-ELETLLPSWEADQVRMDTC---PPALVCMKLTYLINEAVSH--NEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGLKAG 444
T P C +N GCR + PP RY+S+ W L SL S ++ RIS L+ A + + P G+ S H + TALGLLLVFRTN Y RFWE R +W V + R +A + + YH R + L+ AF L+ HL R ++ E + L E D VR+ T PP VC L+ + A EA +D LYLE L+G LV+ G RI+ PVP +YSRHTSRFLSL+T+TLP+ LV + PV+ + W +SIE IG IE PF Q+ L + ++I RDV +L +G
Sbjct: 11 TAHQAYIHPRQCWANGMTRSATFTRGCRHKAVRALQMTTPPSAAEFDYSDHHLLPESRYQSTYWRYTLESLPRSVMLGRISHRLVLVMCSAFLAACLNVAYPSIFAGASTSA--HSIAGTALGLLLVFRTNTGYSRFWEGRTLWTRVVTVIRRIAYFSSNYVPREYHVRLANLLCAFPYVLKQHLYSGMRGVLCVKEFQGFL---EGDDVRLLTRTQEPPVQVCKLLSACLRHAKEQHGGEAPNDRERLYLEGLIGQLVDLAGNCGRIVKVPVPLAYSRHTSRFLSLFTITLPYALVANCGFWVVPVVSGISWAFYSIESIGQYIENPFDVHASQIALNPLCQSITRDVAQILSPPSG 363
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|873219653|emb|CEM37137.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 185.652 bits (470), Expect = 1.559e-49 Identity = 113/297 (38.05%), Postives = 157/297 (52.86%), Query Frame = 0
Query: 152 QRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSD-----ISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRYHARFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWEADQVRMDTCPPALVCMKLTYLINEAV--SHNEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGL 441
+RY S DW E L +L SRI RI G L+F T + ++ H+ + + PH L ALGLLLVFRTNAAY RFWE RK WG++ R LA + Q++H L+ A+ + HLQ + E+ LL E Q++ PP + ++ ++ EA S ++ + + +G L LG ERI+ TPVP SYSRHTSRFL+LY TLPF L+ L PV+ ++ WG SI+EIGH IE+PF Q+P+ + ETI D+ L +
Sbjct: 131 RRYSSEDWLECLLTLPLSRIFVRIRGQLIFQVVLTTFIAALH------HLSRNPKFLTLPSTPHSLTGGALGLLLVFRTNAAYSRFWEGRKCWGTLVTTIRELAYEFSFYMPQKFHHHVLRLLKAYPRLFKQHLQGELNLNEVGHLLTEQERTQIQTVNNPPLYLLRRMCGILYEAYEESGGTKPTERKVVAVNAKLGKLCEMLGACERIIKTPVPVSYSRHTSRFLTLYCATLPFALLESLRWAVVPVVAVMTWGFLSIQEIGHFIEDPFDRIACQIPMEGLCETIEADITDLTSM 421
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|1189380947|gb|OSX68971.1| (hypothetical protein BU14_2020s0001 [Porphyra umbilicalis]) HSP 1 Score: 181.03 bits (458), Expect = 3.691e-48 Identity = 129/335 (38.51%), Postives = 176/335 (52.54%), Query Frame = 0
Query: 141 KSHVTALLDPPQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQ---WHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRYHARFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNE-----ARSDFYA-----------LYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGL--------KAGFDVT 448
K+ A + P+RY S+DW NL SL S +++RIS H+ FNT AT V +++ P WH+ SP+PH L+ TALGLLL +RT+AAYDRFWEARKV G + N RN+ R +L L IA+ HLQ + L + V+ T P + M L + + + E AR+ A +E+LV LV+ LGM ERI+LTP+P +YSRHTSRFLSL+T +L VLV F + + W LF +EE+GH+IE+P + LP I++ TI RD++ GL K G D T
Sbjct: 83 KTVTRAAIQRPERYSSADWWRNLVSLPQSVVLRRISSHVAFNTIVATLVVFLHQYTPDEKIWHL----SPLPHVLLGTALGLLLSYRTSAAYDRFWEARKVLGGMVNETRNIMRMAVTSLRPSSADAVCRLTIAWTFATMHHLQGTESEEGVTEYLTPEQMVTVKGVTNRPMAIAMLLATAVADGFTEKEEALVSARAGVGAGATTANLLAERQEMEKLVTLLVDYLGMCERIVLTPIPLNYSRHTSRFLSLWTASLTVVLVELQGPFLVLDMLFIAWALFGLEEVGHMIEDPLQLTKSSLPFINVCNTIRRDIEQ-QGLAVLAHRASKTGVDAT 412
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|1121279097|ref|WP_073592204.1| (hypothetical protein [Phormidium ambiguum] >gi|1115276809|gb|OKH40141.1| hypothetical protein NIES2119_04250 [Phormidium ambiguum IAM M-71]) HSP 1 Score: 166.777 bits (421), Expect = 5.352e-44 Identity = 96/261 (36.78%), Postives = 148/261 (56.70%), Query Frame = 0
Query: 188 GVTGVYESMPQWHIGSDISPVPHQLM-STALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRY------HARFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGL 441
G+ GV S+ + + P+ L+ + LGLLLVFRTN AY+RFWE RK+WG +TN RNLAR +++D++ L++AFAVT + HL+ +V+ ELE L+ + +++ PP V ++ + + N S + L+ L+ DLV+CLG ERIL TP+P +Y+ H + + LY L+LPF +V + FT ++ IV + L IEEIG IE PF LPL ++ + R+++ L+ L
Sbjct: 31 GLVGVLISVMHYFGWAVSWPILASLIPNIVLGLLLVFRTNTAYERFWEGRKIWGIITNTTRNLARQIWVSVDEKEVRDRDNKVATLKLLVAFAVTTKLHLRGELVNQELEGLITRKQYYKLKEMNNPPLQVAFWISDYLQKQYERNCLNS-YQLTALQALINDLVDCLGGCERILKTPIPLAYAIHLKQLILLYCLSLPFQMVEEFGFFTGIIVAIVSFTLLGIEEIGVEIENPFGYDANDLPLDTICTNMRRNIEDLISL 290
BLAST of EWM29617.1 vs. NCBI_GenBank
Match: gi|551660896|ref|XP_005833215.1| (hypothetical protein GUITHDRAFT_138346 [Guillardia theta CCMP2712] >gi|428177355|gb|EKX46235.1| hypothetical protein GUITHDRAFT_138346 [Guillardia theta CCMP2712]) HSP 1 Score: 169.859 bits (429), Expect = 6.356e-44 Identity = 108/323 (33.44%), Postives = 162/323 (50.15%), Query Frame = 0
Query: 153 RYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYE----SMPQWHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRYHA--RFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQ----LEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCAS---------------TKQLPLISMTETIARDVKHLLGLKAGFDVTFP 450
RY W+ NL ++F SR+ KRI L+ N +G+ +Y + P H + H + + LGLL+ FRTN Y+R+WEARK WG+V CR++A ++ + H R ++ A+ L+ HL+ EL +LP + Q+ P +CM L+ I+ ++ + + EQ + +L + + ER+ TPVP SYSRHTSRFLS++TLT P LV Q L + + P ++CW LF EE+GH+IEEPF T+ LPL+ E I RD++ + L T P
Sbjct: 92 RYADDYWSTNLLTIFRSRVFKRIFPRLVVNFLVCSGIAVLYALSPLTFPAAHGHA------HTITGSFLGLLIAFRTNTGYERYWEARKAWGAVHKRCRSMAVLLATSVTEVDHIVLRVFQILTAYPYALKQHLRGQHSMVELSKMLPKEDIKQLEKAQNMPLHLCMLLSSAISPLLNSPKVTMNLVWERAEQHIQELNKVITITERLATTPVPLSYSRHTSRFLSIWTLTAPIYLVPQCGPLLAVISHP---LICWALFGSEEVGHIIEEPFGTPGDSRFLKEGPGGIRFTENLPLLRYCEQIKRDIEAVERLWQSLPSTAP 405 The following BLAST results are available for this feature:
BLAST of EWM29617.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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