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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100033g41.8413.mrna |
| Orig protein id | gnl|cribi|Naga_100033g41.8413 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:306558..308041 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna115 ID=rna115|Name=rna115|organism=Nannochloropsis gaditana|type=mRNA|length=1275bp
AGGCTTCCCCTTGGTAGCTATAAATTGAAGCCTCGAAGCTTTCGCATGTG
TATGTTCGTATTATCTCATGGGATTCTCCCATCCATTCTCTTTCTATCAC
CTTTTTTTCCAGCCAGGCTTGGGAATCACAGCATGAATTCACCTTACCCT
TTCCGTTGGCTCAGCGCCCTTATAAAAATGCGAAGGAGGTTGTGTGTAAA
GTATGGATCCGTTGTTTTAATCACCGCGATTACGATGGGTCTCCTATGGA
ACTATCATGCGACCCTTGCATATCGTACCATGAGCTTCTCAGCAGCCGAC
GGCCGAAACTACCGCTCCTGGAATGGGACCTTCCAATTTCTGCGGCCTCA
ATGGCAGACCTTCGCAGGATTTATCGACCGCTGCGCGGAGTTTGATGGCT
CGGAACACGATCCGAACGAAAAGGTGCGGGTAAAACGAATATACTCCATC
TTCGCCTCTCCCGGGCCCTCCTTTGACGCTGCAACAACAGCCCTGAATGA
CTACGCGCACGTGGCGGAGGAAAACCGTGAGCAGCCGCCAAATCGACGCG
CCACATTCTCTTGCCTTCCATGGATACATGCTGATGCGCCCGTGTTAATG
CATGGACCTCCCCGGATCGCCATTGCCACCTTGTCAACCGCAGACTACGT
CAACAATAGTGCGGTGTCCTTATCACTCATAGACAAGAAAAAATACTGCG
ACCATCACGGGTACGACCTCCACATCATTCGAAAGACGAGTACAAAACGC
GCGGCCGCGTGGTCCAAGTTGCCGGGTATCCTTTCCCTGCTGGATCAATA
CGATTGGGTCGTTAGCTTGGACGCAGACACGGTCATATACGACCATAGCA
TCAGGCTCGAGGAGTTTCTCGACCCCCACCACGACTTGATCGTCGGGCTT
GATGGCAACGGTGTCAACAGTGGCGTGTTCTTCCTGCGCAATTCCACGTG
GAGCAAGGTACTGCTCACGGAAGCGTGGACGATCACAAACGAGAAAATGA
GTAACATCTGGTGGGAGCAAGCGGCAATAATGCGCCTTCTACAGAGCGAG
GGCATACGGAATCACGTCAAATACTCTCCACAGATGCACTTCAATTCGTA
CGTCACATCTCAGGGCCACGTGAAAATGGACGAGAATGGTGGTCGTGGTC
CCTTCATTGTGCATTTTGCTGGATTGGGTCCGGCGAAGTGGGATATGCTC
CTAGATGTGTACGCGCAACGGAGGAATGTAGAAAACCAAGATATGACCAA
AGAATAAAGTAACGCCTTTCAGCAA back to topprotein sequence of rna115 >rna115-protein ID=rna115-protein|Name=rna115|organism=Nannochloropsis gaditana|type=polypeptide|length=384bp
MGHNRYSGACARIQQLTARNTALAVCIIGLMALVVRVHHQRSGKSMSIAN
WSSMSAGPSSLGSSASCYRDVKPLPFVENRDAIGRVLEEEGMAVGIELGV
QRGLYTEKTLSRWTKCKHMTLVDVWAQLPNYSDQANKPDEVQAQLLREAH
GRLDKFAARGTTLEFLQMLTKDAAPTIPNSSVDFVYVDARHDFCGVMEDI
ELYWPKLRRRDHGWARLLNQFAAKHELQVVVPPFDETWKSWMIRKPSVHC
PGTTPVSAVTRRLIAVDNIRVFACSLSRQMSKRSAGRDLIDASNRYELSH
FRCPPSQHVSPQLYLRVVPHVEGNESARHCIFDRGEGRRGREIFGLSSAA
HAFAVFFQCRLFALYIAILSGGSDTASFCTERAT back to topmRNA from alignment at CM002455.1:306558..308041- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna115 ID=rna115|Name=rna115|organism=Nannochloropsis gaditana|type=mRNA|length=1484bp|location=Sequence derived from alignment at CM002455.1:306558..308041- (Nannochloropsis gaditana)
ATGGGGCACAATCGATACTCTGGAGCCTGCGCGAGGATACAGCAGCTCAC
CGCGCGCAACACGGCCCTGGCAGTTTGTATCATTGGCCTGATGGCGCTGG
TCGTCCGGGTCCACCATCAGCGGAGCGGCAAGTCTATGAGCATTGCCAAC
TGGTCGTCGATGTCTGCTGGCCCCTCCTCCTTGGGATCTTCGGCCTCCTG
CTATCGTGACGTGAAGCCCCTGCCCTTCGTCGAAAATCGCGACGCCATAG
GGCGCGTGCTGGAGGAGGAGGGAATGGCGGTAGGAATCGAGCTTGGGGTG
CAGCGTGGGTTGTACACCGAGAAGACGTTGAGCCGTTGGACAAAATGCAA
GCATATGACGCTTGTGGATGTTTGGGCGCAGTTGCCAAACTACAGCGATC
AGGCTAATAAGCCCGATGAGGTGCAGGCGCAGCTCCTGCGGTAAGGATAC
GGCGCGTTCGCGATTTTATGCACAGAGCTCGCCACACCAAGCGGCCCGTT
ATATTGATATTTACTCATCTTTCTTCCCACTTTGTGGACACAGCGAGGCC
CATGGCCGCTTGGACAAATTTGCAGCCCGGGGCACCACGCTCGAGTTCCT
GCAGATGCTGACCAAGGATGCCGCCCCCACGATCCCCAACAGCTCCGTCG
ACTTCGTCTACGTCGATGCCCGTCACGACTTTTGCGGGGTAATGGAGGAC
ATTGAACTGTATTGGCCCAAGCTCAGAAGGCGGGATCATGGCTGGGCACG
ACTACGTACGTGAAGAGACATGGAAGAACTCCGGGCAGGATTGGGCACTG
TGCGAGGATGGGAGCCGCAACCCGCTTGCGGTCCTGGGAGCAGTGAATCA
ATTCGCGGCGAAGCACGAACTGCAGGTGGGCACAAAACCAGGCATCGGTC
ACGTTCAGGAATTTTGTTGAGAGCTTTCATCATACCCTTCTTCTGTATCT
CCTTCCTTTCCCGCTCAACAGGTGGTCGTCCCTCCTTTTGATGAGACATG
GAAAAGTTGGATGATCCGCAAACCATCTGTACACTGCCCTGGGACCACAC
CTGTATCCGCAGTCACTCGTCGGCTTAGTCTGTGGACCTAATTTTATTGC
TGAGGGACAAAGCAATGAGTTGCCGTGGACAACATACGTGTCTTTGCCTG
TTCACTTTCTAGACAAATGAGCAAAAGATCGGCCGGACGAGACCTCATAG
ACGCAAGTAATCGCTACGAACTGTCGCACTTCCGCTGTCCGCCTTCTCAG
CACGTCAGTCCACAATTGTATCTTCGGGTGGTGCCCCATGTAGAGGGTAA
TGAGAGCGCAAGACACTGCATTTTCGACAGGGGCGAAGGGAGAAGAGGGA
GGGAGATATTCGGCCTAAGTTCAGCAGCTCATGCATTCGCAGTCTTTTTC
CAATGTCGTCTTTTCGCACTATATATCGCAATACTCTCAGGGGGATCAGA
CACTGCTTCTTTTTGTACCGAGCGGGCAACATAG back to topCoding sequence (CDS) from alignment at CM002455.1:306558..308041- >rna115 ID=rna115|Name=rna115|organism=Nannochloropsis gaditana|type=CDS|length=5775bp|location=Sequence derived from alignment at CM002455.1:306558..308041- (Nannochloropsis gaditana)
TTGCCGTGGACAACATACGTGTCTTTGCCTGTTCACTTTCTAGACAAATG
AGCAAAAGATCGGCCGGACGAGACCTCATAGACGCAAGTAATCGCTACGA
ACTGTCGCACTTCCGCTGTCCGCCTTCTCAGCACGTCAGTCCACAATTGT
ATCTTCGGGTGGTGCCCCATGTAGAGGGTAATGAGAGCGCAAGACACTGC
ATTTTCGACAGGGGCGAAGGGAGAAGAGGGAGGGAGATATTCGGCCTAAG
TTCAGCAGCTCATGCATTCGCAGTCTTTTTCCAATGTCGTCTTTTCGCAC
TATATATCGCAATACTCTCAGGGGGATCAGACACTGCTTCTTTTTGTACC
GAGCGGGCAACATAGGTGGTCGTCCCTCCTTTTGATGAGACATGGAAAAG
TTGGATGATCCGCAAACCATCTGTACACTGCCCTGGGACCACACCTGTAT
CCGCAGTCACTCGTCGGCTTATGAATCAATTCGCGGCGAAGCACGAACTG
CAGCGAGGCCCATGGCCGCTTGGACAAATTTGCAGCCCGGGGCACCACGC
TCGAGTTCCTGCAGATGCTGACCAAGGATGCCGCCCCCACGATCCCCAAC
AGCTCCGTCGACTTCGTCTACGTCGATGCCCGTCACGACTTTTGCGGGGT
AATGGAGGACATTGAACTGTATTGGCCCAAGCTCAGAAGGCGGGATCATG
GCTGGGCACGACTACATGGGGCACAATCGATACTCTGGAGCCTGCGCGAG
GATACAGCAGCTCACCGCGCGCAACACGGCCCTGGCAGTTTGTATCATTG
GCCTGATGGCGCTGGTCGTCCGGGTCCACCATCAGCGGAGCGGCAAGTCT
ATGAGCATTGCCAACTGGTCGTCGATGTCTGCTGGCCCCTCCTCCTTGGG
ATCTTCGGCCTCCTGCTATCGTGACGTGAAGCCCCTGCCCTTCGTCGAAA
ATCGCGACGCCATAGGGCGCGTGCTGGAGGAGGAGGGAATGGCGGTAGGA
ATCGAGCTTGGGGTGCAGCGTGGGTTGTACACCGAGAAGACGTTGAGCCG
TTGGACAAAATGCAAGCATATGACGCTTGTGGATGTTTGGGCGCAGTTGC
CAAACTACAGCGATCAGGCTAATAAGCCCGATGAGGTGCAGGCGCAGCTC
CTGCGTTGCCGTGGACAACATACGTGTCTTTGCCTGTTCACTTTCTAGAC
AAATGAGCAAAAGATCGGCCGGACGAGACCTCATAGACGCAAGTAATCGC
TACGAACTGTCGCACTTCCGCTGTCCGCCTTCTCAGCACGTCAGTCCACA
ATTGTATCTTCGGGTGGTGCCCCATGTAGAGGGTAATGAGAGCGCAAGAC
ACTGCATTTTCGACAGGGGCGAAGGGAGAAGAGGGAGGGAGATATTCGGC
CTAAGTTCAGCAGCTCATGCATTCGCAGTCTTTTTCCAATGTCGTCTTTT
CGCACTATATATCGCAATACTCTCAGGGGGATCAGACACTGCTTCTTTTT
GTACCGAGCGGGCAACATAGGTGGTCGTCCCTCCTTTTGATGAGACATGG
AAAAGTTGGATGATCCGCAAACCATCTGTACACTGCCCTGGGACCACACC
TGTATCCGCAGTCACTCGTCGGCTTATGAATCAATTCGCGGCGAAGCACG
AACTGCAGCGAGGCCCATGGCCGCTTGGACAAATTTGCAGCCCGGGGCAC
CACGCTCGAGTTCCTGCAGATGCTGACCAAGGATGCCGCCCCCACGATCC
CCAACAGCTCCGTCGACTTCGTCTACGTCGATGCCCGTCACGACTTTTGC
GGGGTAATGGAGGACATTGAACTGTATTGGCCCAAGCTCAGAAGGCGGGA
TCATGGCTGGGCACGACTACATGGGGCACAATCGATACTCTGGAGCCTGC
GCGAGGATACAGCAGCTCACCGCGCGCAACACGGCCCTGGCAGTTTGTAT
CATTGGCCTGATGGCGCTGGTCGTCCGGGTCCACCATCAGCGGAGCGGCA
AGTCTATGAGCATTGCCAACTGGTCGTCGATGTCTGCTGGCCCCTCCTCC
TTGGGATCTTCGGCCTCCTGCTATCGTGACGTGAAGCCCCTGCCCTTCGT
CGAAAATCGCGACGCCATAGGGCGCGTGCTGGAGGAGGAGGGAATGGCGG
TAGGAATCGAGCTTGGGGTGCAGCGTGGGTTGTACACCGAGAAGACGTTG
AGCCGTTGGACAAAATGCAAGCATATGACGCTTGTGGATGTTTGGGCGCA
GTTGCCAAACTACAGCGATCAGGCTAATAAGCCCGATGAGGTGCAGGCGC
AGCTCCTGCGTTGCCGTGGACAACATACGTGTCTTTGCCTGTTCACTTTC
TAGACAAATGAGCAAAAGATCGGCCGGACGAGACCTCATAGACGCAAGTA
ATCGCTACGAACTGTCGCACTTCCGCTGTCCGCCTTCTCAGCACGTCAGT
CCACAATTGTATCTTCGGGTGGTGCCCCATGTAGAGGGTAATGAGAGCGC
AAGACACTGCATTTTCGACAGGGGCGAAGGGAGAAGAGGGAGGGAGATAT
TCGGCCTAAGTTCAGCAGCTCATGCATTCGCAGTCTTTTTCCAATGTCGT
CTTTTCGCACTATATATCGCAATACTCTCAGGGGGATCAGACACTGCTTC
TTTTTGTACCGAGCGGGCAACATAGGTGGTCGTCCCTCCTTTTGATGAGA
CATGGAAAAGTTGGATGATCCGCAAACCATCTGTACACTGCCCTGGGACC
ACACCTGTATCCGCAGTCACTCGTCGGCTTATGAATCAATTCGCGGCGAA
GCACGAACTGCAGCGAGGCCCATGGCCGCTTGGACAAATTTGCAGCCCGG
GGCACCACGCTCGAGTTCCTGCAGATGCTGACCAAGGATGCCGCCCCCAC
GATCCCCAACAGCTCCGTCGACTTCGTCTACGTCGATGCCCGTCACGACT
TTTGCGGGGTAATGGAGGACATTGAACTGTATTGGCCCAAGCTCAGAAGG
CGGGATCATGGCTGGGCACGACTACATGGGGCACAATCGATACTCTGGAG
CCTGCGCGAGGATACAGCAGCTCACCGCGCGCAACACGGCCCTGGCAGTT
TGTATCATTGGCCTGATGGCGCTGGTCGTCCGGGTCCACCATCAGCGGAG
CGGCAAGTCTATGAGCATTGCCAACTGGTCGTCGATGTCTGCTGGCCCCT
CCTCCTTGGGATCTTCGGCCTCCTGCTATCGTGACGTGAAGCCCCTGCCC
TTCGTCGAAAATCGCGACGCCATAGGGCGCGTGCTGGAGGAGGAGGGAAT
GGCGGTAGGAATCGAGCTTGGGGTGCAGCGTGGGTTGTACACCGAGAAGA
CGTTGAGCCGTTGGACAAAATGCAAGCATATGACGCTTGTGGATGTTTGG
GCGCAGTTGCCAAACTACAGCGATCAGGCTAATAAGCCCGATGAGGTGCA
GGCGCAGCTCCTGCGTTGCCGTGGACAACATACGTGTCTTTGCCTGTTCA
CTTTCTAGACAAATGAGCAAAAGATCGGCCGGACGAGACCTCATAGACGC
AAGTAATCGCTACGAACTGTCGCACTTCCGCTGTCCGCCTTCTCAGCACG
TCAGTCCACAATTGTATCTTCGGGTGGTGCCCCATGTAGAGGGTAATGAG
AGCGCAAGACACTGCATTTTCGACAGGGGCGAAGGGAGAAGAGGGAGGGA
GATATTCGGCCTAAGTTCAGCAGCTCATGCATTCGCAGTCTTTTTCCAAT
GTCGTCTTTTCGCACTATATATCGCAATACTCTCAGGGGGATCAGACACT
GCTTCTTTTTGTACCGAGCGGGCAACATAGGTGGTCGTCCCTCCTTTTGA
TGAGACATGGAAAAGTTGGATGATCCGCAAACCATCTGTACACTGCCCTG
GGACCACACCTGTATCCGCAGTCACTCGTCGGCTTATGAATCAATTCGCG
GCGAAGCACGAACTGCAGCGAGGCCCATGGCCGCTTGGACAAATTTGCAG
CCCGGGGCACCACGCTCGAGTTCCTGCAGATGCTGACCAAGGATGCCGCC
CCCACGATCCCCAACAGCTCCGTCGACTTCGTCTACGTCGATGCCCGTCA
CGACTTTTGCGGGGTAATGGAGGACATTGAACTGTATTGGCCCAAGCTCA
GAAGGCGGGATCATGGCTGGGCACGACTACATGGGGCACAATCGATACTC
TGGAGCCTGCGCGAGGATACAGCAGCTCACCGCGCGCAACACGGCCCTGG
CAGTTTGTATCATTGGCCTGATGGCGCTGGTCGTCCGGGTCCACCATCAG
CGGAGCGGCAAGTCTATGAGCATTGCCAACTGGTCGTCGATGTCTGCTGG
CCCCTCCTCCTTGGGATCTTCGGCCTCCTGCTATCGTGACGTGAAGCCCC
TGCCCTTCGTCGAAAATCGCGACGCCATAGGGCGCGTGCTGGAGGAGGAG
GGAATGGCGGTAGGAATCGAGCTTGGGGTGCAGCGTGGGTTGTACACCGA
GAAGACGTTGAGCCGTTGGACAAAATGCAAGCATATGACGCTTGTGGATG
TTTGGGCGCAGTTGCCAAACTACAGCGATCAGGCTAATAAGCCCGATGAG
GTGCAGGCGCAGCTCCTGCGTTGCCGTGGACAACATACGTGTCTTTGCCT
GTTCACTTTCTAGACAAATGAGCAAAAGATCGGCCGGACGAGACCTCATA
GACGCAAGTAATCGCTACGAACTGTCGCACTTCCGCTGTCCGCCTTCTCA
GCACGTCAGTCCACAATTGTATCTTCGGGTGGTGCCCCATGTAGAGGGTA
ATGAGAGCGCAAGACACTGCATTTTCGACAGGGGCGAAGGGAGAAGAGGG
AGGGAGATATTCGGCCTAAGTTCAGCAGCTCATGCATTCGCAGTCTTTTT
CCAATGTCGTCTTTTCGCACTATATATCGCAATACTCTCAGGGGGATCAG
ACACTGCTTCTTTTTGTACCGAGCGGGCAACATAGGTGGTCGTCCCTCCT
TTTGATGAGACATGGAAAAGTTGGATGATCCGCAAACCATCTGTACACTG
CCCTGGGACCACACCTGTATCCGCAGTCACTCGTCGGCTTATGAATCAAT
TCGCGGCGAAGCACGAACTGCAGCGAGGCCCATGGCCGCTTGGACAAATT
TGCAGCCCGGGGCACCACGCTCGAGTTCCTGCAGATGCTGACCAAGGATG
CCGCCCCCACGATCCCCAACAGCTCCGTCGACTTCGTCTACGTCGATGCC
CGTCACGACTTTTGCGGGGTAATGGAGGACATTGAACTGTATTGGCCCAA
GCTCAGAAGGCGGGATCATGGCTGGGCACGACTACATGGGGCACAATCGA
TACTCTGGAGCCTGCGCGAGGATACAGCAGCTCACCGCGCGCAACACGGC
CCTGGCAGTTTGTATCATTGGCCTGATGGCGCTGGTCGTCCGGGTCCACC
ATCAGCGGAGCGGCAAGTCTATGAGCATTGCCAACTGGTCGTCGATGTCT
GCTGGCCCCTCCTCCTTGGGATCTTCGGCCTCCTGCTATCGTGACGTGAA
GCCCCTGCCCTTCGTCGAAAATCGCGACGCCATAGGGCGCGTGCTGGAGG
AGGAGGGAATGGCGGTAGGAATCGAGCTTGGGGTGCAGCGTGGGTTGTAC
ACCGAGAAGACGTTGAGCCGTTGGACAAAATGCAAGCATATGACGCTTGT
GGATGTTTGGGCGCAGTTGCCAAACTACAGCGATCAGGCTAATAAGCCCG
ATGAGGTGCAGGCGCAGCTCCTGCG back to top
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