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Properties
| Property Name | Value |
|---|
| Product | galactosyl transferase gma12 mnn10 family protein |
| Orig transcript id | gnl|cribi|Naga_100033g40.8414.mrna |
| Orig protein id | gnl|cribi|Naga_100033g40.8414 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:305025..306506 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna114 ID=rna114|Name=rna114|organism=Nannochloropsis gaditana|type=mRNA|length=2292bp
ACAAGAATTTACAGAGGTTGACTGAATTTAAGAGCTAGCCAGTATTTGAA
AGCCATCCGTTCTGCCTCCTGTAGGACACCTGCCCTCTTCATGTCCCGTA
CTCCTTACCTCTCGGCGACGGCAGACGGCACTAATAATACAACCAACGCT
GTCGCAAACACCGCCAAATTGTCGGAGGAGAAGTCAACGCGTAGTATTGA
GCAGTCTTCCATTGGTACTGCCCATCGGAGGGGAACTTTGGACATCTTAC
AGCATGACAAATACGCCTTAGCCGCGTTCCTTTTCCGCACCTCTTTGGTC
CTCGCTATTGCCTGGTATCTCAACCCCGAGCGCATACCGTACTGCCAATG
TTTGGCGCGCATTCTCCTCTTGCAAATATGGGAATGGAGCGATGCAGAAT
TACCCGGCGCTGTAGCGCATTTCCTCGTGCTTTTCAAAGAAATATTACGG
AGCCTCTCCCTCTTCCTCTTGACCCTCAGTGCGACTTGCTTCTGCGCCGC
GTGTTATCAAAGTACTCGGGCAGACTCATCCTCTAAATTATTGGAGAATT
TGACAGATCCTCAGCGTCGTCTGTTGGGTTTGGAGAACGTACAGCCCAAG
ATTGATCAGAAAACCCCACGGGTGGAGGTCGCGGAGATGCCGACGCCTTT
GGAAAAAGGTTCTTTCACACCCCTTGTCTCCCCTTCGCATCCCCCTTCCT
CTGCTGGAAAAGGTCGTTTACCGCTAGTTGACACGACAGGCGGGCCAAGC
GTGGAATCGTCGTCCTCCCAGTACCTGACTCCGCCGCCATCGATGTACAG
GGCACGTGCCACCCCTACCAAAGTCGCGCTCTTCCCTTCGGGCGGGAGTG
GAGGGGACAAGGGCCGCCCGCCACGACGGAAGAGTGGAGGCGATGGGGCT
GTGAGCTTTGGAGAAAGTGCGGACGTGAAAATGAAAGGTTTGCTGGACGA
GATGCTTGTGGCAGCCGACGGGACACCCGTGTCAGGGCAACAGCTGACCC
CGCAAGGGAGAGGACTGAGCGCATCCAAGGGCGCACACCAATTTCTGAGC
AACGTTCCGATATCTCCCCTTACGAACGAGGTGGTGGGGCCGTACAGAGA
GTCGGCGCTGGGGGGGGCAGGCGGGGGCCTATTGGGGGGACCGAGCGGGT
CTCCGACTGAGCGGTGGGACGTCCGGGAGTGGCCACAGATACTGCAACAC
CGGATCGGGGGGGGCTTGGACGTGTACAAACTCTCAAATTACGTGGATAA
TCTGCGAGAGACGCTGTACACGGAAATCATCGACTTGCTCACGCGCTTTA
ACGCGGCCGTGGTGGCGCTGGAGCGTTGCGGGGTCCCTCTCGACTTATTG
CTGGGAGAAGTGAACAGCACGCCGTCAGGATTGGGCTTGGAGGACTACTT
GAACCAGGCTCGGGGCCAGTGGGAGAAGGAGGTGCAAGAATACACGGGCC
TGAAGCGCGTCTTGTCCGAGGGAGAGGGTTGGATGGACCGCTTCGGACAC
ATCTATCGACGTTTGGGGGCCATGGTCCAAGACTCCTACCTGAGCAGCTA
TGAATGGTCGCGAGGGGGCGTACTGAGGCATCGGAATGTGACGGTAGAAC
TGCCGACGGACGCGGATTTGATCATGCATGTCTTCCTATGGCGTTGCGAC
GCCATGGCCGAGCACCGTTTGCACGGGGGGGACCGCCCCTTTGTCAAGCA
GCATTTTTTGGAGGTCCCACCAGGCACCGAAGAGAGCAGCCGCAGTCTGC
GGGGGCGTAATTTGATCATGCGGCACGGGACAAGTCCCCCGTACTTCTCG
GTAGTGGAAAACGGGCTCGTGCACCGGATTCCAACAGGGAAGGACAACGC
GCTGGTGGCGATCGTAGTTTTTCTCTTTTTGGCGCGGAGGGACCGTTGGC
TTCCCAAGTACAATCCGGGCTATCGTCGCTTGTTGGAAGGGGTTTTTGGG
TCCGCCGTGCATCCAGAGGGTGGAGCGCGGGGCGACAAAGGGGGCCAAAA
GGAGGATGGAAAACGGGGGGATAAGGCGTTCGGGCTACCCGATGCTAGCA
AGAGGAAAAGCGATGGCGATAGAGATGGAAGTCCGGAGGTAGAAGGTCGA
TGATGTAATGATAAAGAGTCGGATGGGAATGGTTTGGGAAGACCCATTTT
GTTTGAAGTGCATTGAGCTCCTTCTTTACTTTTATGAGGAGGCATCGAAT
ATATATGTTGCTTCAACCATTAAACCCGCCCATGTACACATCCAATGTTA
TGAATAAACGCAAAGGATGAAGAACAGACAACGTTGGAAGGC back to topprotein sequence of rna114 >rna114-protein ID=rna114-protein|Name=rna114|organism=Nannochloropsis gaditana|type=polypeptide|length=403bp
MCMFVLSHGILPSILFLSPFFPARLGNHSMNSPYPFRWLSALIKMRRRLC
VKYGSVVLITAITMGLLWNYHATLAYRTMSFSAADGRNYRSWNGTFQFLR
PQWQTFAGFIDRCAEFDGSEHDPNEKVRVKRIYSIFASPGPSFDAATTAL
NDYAHVAEENREQPPNRRATFSCLPWIHADAPVLMHGPPRIAIATLSTAD
YVNNSAVSLSLIDKKKYCDHHGYDLHIIRKTSTKRAAAWSKLPGILSLLD
QYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNS
TWSKVLLTEAWTITNEKMSNIWWEQAAIMRLLQSEGIRNHVKYSPQMHFN
SYVTSQGHVKMDENGGRGPFIVHFAGLGPAKWDMLLDVYAQRRNVENQDM
TKE back to topmRNA from alignment at CM002455.1:305025..306506+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna114 ID=rna114|Name=rna114|organism=Nannochloropsis gaditana|type=mRNA|length=1482bp|location=Sequence derived from alignment at CM002455.1:305025..306506+ (Nannochloropsis gaditana)
AGGCTTCCCCTTGGTAGCTATAAATTGAAGCCTCGAAGCTTTCGCATGTG
TATGTTCGTATTATCTCATGGGATTCTCCCATCCATTCTCTTTCTATCAC
CTTTTTTTCCAGCCAGGCTTGGGAATGTAAGTGGTCAGATTCGGAAGTCT
AAGTGAAGCATTTTAAGTACATCATCGACTTTCGAATTTGAGACCTATAG
GCTAATAAATGTCGCGAAAACCATCATCCACGGCACTAGCACAGCATGAA
TTCACCTTACCCTTTCCGTTGGCTCAGCGCCCTTATAAAAATGCGAAGGA
GGTTGTGTGTAAAGTATGGATCCGTTGTTTTAATCACCGCGATTACGATG
GGTCTCCTATGGAACTATCATGTACGTGCGATATTTTGGTGTGTAGAGCA
AGCTGTATCGATTTGAATCGACAAGTAAGTGGAAAGATCGGTTTAATCAC
TCCCCACGCCCACAGGCGACCCTTGCATATCGTACCATGAGCTTCTCAGC
AGCCGACGGCCGAAACTACCGCTCCTGGAATGGGACCTTCCAATTTCTGC
GGCCTCAATGGCAGACCTTCGCAGGATTTATCGACCGCTGCGCGGAGTTT
GATGGCTCGGAACACGATCCGAACGAAAAGGTGCGGGTAAAACGAATATA
CTCCATCTTCGCCTCTCCCGGGCCCTCCTTTGACGCTGCAACAACAGCCC
TGAATGACTACGCGcacgtggcggaggaaaacCGTGAGCAGCCGCCAAAT
CGACGCGCCACATTCTCTTGCCTTCCATGGATACATGCTGATGCGCCCGT
GTTAATGCATGGACCTCCCCGGATCGCCATTGCCACCTTGTCAACCGCAG
ACTACGTCAACAATAGTGCGGTGTCCTTATCACTCATAGACAAGAAAAAA
TACTGCGACCATCACGGGTACGACCTCCACATCATTCGAAAGACGAGTAC
AAAACGCGCGGCCGCGTGGTCCAAGTTGCCGGGTATCCTTTCCCTGCTGG
ATCAATACGATTGGGTCGTTAGCTTGGACGCAGACACGGTCATATACGAC
CATAGCATCAGGCTCGAGGAGTTTCTCGACCCCCACCACGACTTGATCGT
CGGGCTTGATGGCAACGGTGTCAACAGTGGCGTGTTCTTCCTGCGCAATT
CCACGTGGAGCAAGGTACTGCTCACGGAAGCGTGGACGATCACAAACGAG
AAAATGAGTAACATCTGGTGGGAGCAAGCGGCAATAATGCGCCTTCTACA
GAGCGAGGGCATACGGAATCACGTCAAATACTCTCCACAGATGCACTTCA
ATTCGTACGTCACATCTCAGGGCCACGTGAAAATGGACGAGAATGGTGGT
CGTGGTCCCTTCATTGTGCATTTTGCTGGATTGGGTCCGGCGAAGTGGGA
TATGCTCCTAGATGTGTACGCGCAACGGAGGAATGTAGAAAACCAAGATA
TGACCAAAGAATAAAGTAACGCCTTTCAGCAA back to topCoding sequence (CDS) from alignment at CM002455.1:305025..306506+ >rna114 ID=rna114|Name=rna114|organism=Nannochloropsis gaditana|type=CDS|length=3636bp|location=Sequence derived from alignment at CM002455.1:305025..306506+ (Nannochloropsis gaditana)
ATGTGTATGTTCGTATTATCTCATGGGATTCTCCCATCCATTCTCTTTCT
ATCACCTTTTTTTCCAGCCAGGCTTGGGAATCACAGCATGAATTCACCTT
ACCCTTTCCGTTGGCTCAGCGCCCTTATAAAAATGCGAAGGAGGTTGTGT
GTAAAGTATGGATCCGTTGTTTTAATCACCGCGATTACGATGGGTCTCCT
ATGGAACTATCATGCGACCCTTGCATATCGTACCATGAGCTTCTCAGCAG
CCGACGGCCGAAACTACCGCTCCTGGAATGGGACCTTCCAATTTCTGCGG
CCTCAATGGCAGACCTTCGCAGGATTTATCGACCGCTGCGCGGAGTTTGA
TGGCTCGGAACACGATCCGAACGAAAAGGTGCGGGTAAAACGAATATACT
CCATCTTCGCCTCTCCCGGGCCCTCCTTTGACGCTGCAACAACAGCCCTG
AATGACTACGCGcacgtggcggaggaaaacCGTGAGCAGCCGCCAAATCG
ACGCGCCACATTCTCTTGCCTTCCATGGATACATGCTGATGCGCCCGTGT
TAATGCATGGACCTCCCCGGATCGCCATTGCCACCTTGTCAACCGCAGAC
TACGTCAACAATAGTGCGGTGTCCTTATCACTCATAGACAAGAAAAAATA
CTGCGACCATCACGGGTACGACCTCCACATCATTCGAAAGACGAGTACAA
AACGCGCGGCCGCGTGGTCCAAGTTGCCGGGTATCCTTTCCCTGCTGGAT
CAATACGATTGGGTCGTTAGCTTGGACGCAGACACGGTCATATACGACCA
TAGCATCAGGCTCGAGGAGTTTCTCGACCCCCACCACGACTTGATCGTCG
GGCTTGATGGCAACGGTGTCAACAGTGGCGTGTTCTTCCTGCGCAATTCC
ACGTGGAGCAAGGTACTGCTCACGGAAGCGTGGACGATCACAAACGAGAA
AATGAGTAACATCTGGTGGGAGCAAGCGGCAATAATGCGCCTTCTACAGA
GCGAGGGCATACGGAATCACGTCAAATACTCTCCACAGATGCACTTCAAT
TCGTACGTCACATCTCAGGGCCACGTGAAAATGGACGAGAATGGTGGTCG
TGGTCCCTTCATTGTGCATTTTGCTGGATTGGGTCCGGCGAAGTGGGATA
TGCTCCTAGATGTGTACGCGCAACGGAGGAATGTAGAAAACCAAGATATG
ACCAAAGAATAAATGTGTATGTTCGTATTATCTCATGGGATTCTCCCATC
CATTCTCTTTCTATCACCTTTTTTTCCAGCCAGGCTTGGGAATCACAGCA
TGAATTCACCTTACCCTTTCCGTTGGCTCAGCGCCCTTATAAAAATGCGA
AGGAGGTTGTGTGTAAAGTATGGATCCGTTGTTTTAATCACCGCGATTAC
GATGGGTCTCCTATGGAACTATCATGCGACCCTTGCATATCGTACCATGA
GCTTCTCAGCAGCCGACGGCCGAAACTACCGCTCCTGGAATGGGACCTTC
CAATTTCTGCGGCCTCAATGGCAGACCTTCGCAGGATTTATCGACCGCTG
CGCGGAGTTTGATGGCTCGGAACACGATCCGAACGAAAAGGTGCGGGTAA
AACGAATATACTCCATCTTCGCCTCTCCCGGGCCCTCCTTTGACGCTGCA
ACAACAGCCCTGAATGACTACGCGcacgtggcggaggaaaacCGTGAGCA
GCCGCCAAATCGACGCGCCACATTCTCTTGCCTTCCATGGATACATGCTG
ATGCGCCCGTGTTAATGCATGGACCTCCCCGGATCGCCATTGCCACCTTG
TCAACCGCAGACTACGTCAACAATAGTGCGGTGTCCTTATCACTCATAGA
CAAGAAAAAATACTGCGACCATCACGGGTACGACCTCCACATCATTCGAA
AGACGAGTACAAAACGCGCGGCCGCGTGGTCCAAGTTGCCGGGTATCCTT
TCCCTGCTGGATCAATACGATTGGGTCGTTAGCTTGGACGCAGACACGGT
CATATACGACCATAGCATCAGGCTCGAGGAGTTTCTCGACCCCCACCACG
ACTTGATCGTCGGGCTTGATGGCAACGGTGTCAACAGTGGCGTGTTCTTC
CTGCGCAATTCCACGTGGAGCAAGGTACTGCTCACGGAAGCGTGGACGAT
CACAAACGAGAAAATGAGTAACATCTGGTGGGAGCAAGCGGCAATAATGC
GCCTTCTACAGAGCGAGGGCATACGGAATCACGTCAAATACTCTCCACAG
ATGCACTTCAATTCGTACGTCACATCTCAGGGCCACGTGAAAATGGACGA
GAATGGTGGTCGTGGTCCCTTCATTGTGCATTTTGCTGGATTGGGTCCGG
CGAAGTGGGATATGCTCCTAGATGTGTACGCGCAACGGAGGAATGTAGAA
AACCAAGATATGACCAAAGAATAAATGTGTATGTTCGTATTATCTCATGG
GATTCTCCCATCCATTCTCTTTCTATCACCTTTTTTTCCAGCCAGGCTTG
GGAATCACAGCATGAATTCACCTTACCCTTTCCGTTGGCTCAGCGCCCTT
ATAAAAATGCGAAGGAGGTTGTGTGTAAAGTATGGATCCGTTGTTTTAAT
CACCGCGATTACGATGGGTCTCCTATGGAACTATCATGCGACCCTTGCAT
ATCGTACCATGAGCTTCTCAGCAGCCGACGGCCGAAACTACCGCTCCTGG
AATGGGACCTTCCAATTTCTGCGGCCTCAATGGCAGACCTTCGCAGGATT
TATCGACCGCTGCGCGGAGTTTGATGGCTCGGAACACGATCCGAACGAAA
AGGTGCGGGTAAAACGAATATACTCCATCTTCGCCTCTCCCGGGCCCTCC
TTTGACGCTGCAACAACAGCCCTGAATGACTACGCGcacgtggcggagga
aaacCGTGAGCAGCCGCCAAATCGACGCGCCACATTCTCTTGCCTTCCAT
GGATACATGCTGATGCGCCCGTGTTAATGCATGGACCTCCCCGGATCGCC
ATTGCCACCTTGTCAACCGCAGACTACGTCAACAATAGTGCGGTGTCCTT
ATCACTCATAGACAAGAAAAAATACTGCGACCATCACGGGTACGACCTCC
ACATCATTCGAAAGACGAGTACAAAACGCGCGGCCGCGTGGTCCAAGTTG
CCGGGTATCCTTTCCCTGCTGGATCAATACGATTGGGTCGTTAGCTTGGA
CGCAGACACGGTCATATACGACCATAGCATCAGGCTCGAGGAGTTTCTCG
ACCCCCACCACGACTTGATCGTCGGGCTTGATGGCAACGGTGTCAACAGT
GGCGTGTTCTTCCTGCGCAATTCCACGTGGAGCAAGGTACTGCTCACGGA
AGCGTGGACGATCACAAACGAGAAAATGAGTAACATCTGGTGGGAGCAAG
CGGCAATAATGCGCCTTCTACAGAGCGAGGGCATACGGAATCACGTCAAA
TACTCTCCACAGATGCACTTCAATTCGTACGTCACATCTCAGGGCCACGT
GAAAATGGACGAGAATGGTGGTCGTGGTCCCTTCATTGTGCATTTTGCTG
GATTGGGTCCGGCGAAGTGGGATATGCTCCTAGATGTGTACGCGCAACGG
AGGAATGTAGAAAACCAAGATATGACCAAAGAATAA back to top
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