EWM30575.1, cds114 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|585113242|gb|EWM30575.1| (galactosyl transferase gma12 mnn10 family protein [Nannochloropsis gaditana]) HSP 1 Score: 845.499 bits (2183), Expect = 0.000e+0 Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0
Query: 1 MCMFVLSHGILPSILFLSPFFPARLGNHSMNSPYPFRWLSALIKMRRRLCVKYGSVVLITAITMGLLWNYHATLAYRTMSFSAADGRNYRSWNGTFQFLRPQWQTFAGFIDRCAEFDGSEHDPNEKVRVKRIYSIFASPGPSFDAATTALNDYAHVAEENREQPPNRRATFSCLPWIHADAPVLMHGPPRIAIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRKTSTKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWTITNEKMSNIWWEQAAIMRLLQSEGIRNHVKYSPQMHFNSYVTSQGHVKMDENGGRGPFIVHFAGLGPAKWDMLLDVYAQRRNVENQDMTKE 403
MCMFVLSHGILPSILFLSPFFPARLGNHSMNSPYPFRWLSALIKMRRRLCVKYGSVVLITAITMGLLWNYHATLAYRTMSFSAADGRNYRSWNGTFQFLRPQWQTFAGFIDRCAEFDGSEHDPNEKVRVKRIYSIFASPGPSFDAATTALNDYAHVAEENREQPPNRRATFSCLPWIHADAPVLMHGPPRIAIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRKTSTKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWTITNEKMSNIWWEQAAIMRLLQSEGIRNHVKYSPQMHFNSYVTSQGHVKMDENGGRGPFIVHFAGLGPAKWDMLLDVYAQRRNVENQDMTKE
Sbjct: 1 MCMFVLSHGILPSILFLSPFFPARLGNHSMNSPYPFRWLSALIKMRRRLCVKYGSVVLITAITMGLLWNYHATLAYRTMSFSAADGRNYRSWNGTFQFLRPQWQTFAGFIDRCAEFDGSEHDPNEKVRVKRIYSIFASPGPSFDAATTALNDYAHVAEENREQPPNRRATFSCLPWIHADAPVLMHGPPRIAIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRKTSTKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWTITNEKMSNIWWEQAAIMRLLQSEGIRNHVKYSPQMHFNSYVTSQGHVKMDENGGRGPFIVHFAGLGPAKWDMLLDVYAQRRNVENQDMTKE 403
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|545354271|ref|XP_005642970.1| (hypothetical protein COCSUDRAFT_54970 [Coccomyxa subellipsoidea C-169] >gi|384244929|gb|EIE18426.1| hypothetical protein COCSUDRAFT_54970 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 108.612 bits (270), Expect = 1.447e-23 Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = 0
Query: 190 RIAIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRKTSTKRAAAWSKLPGILSLLD--QYDWVVSLDADTVIYDHSIRLEEFL--DPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWT---ITNEKMSNIWWEQAAIMRLLQ-SEGIRNHVKYSPQMHFNSYVTSQGHVKMDENGGRGPFIVHFAG 376
R AI ++ T V + + ++ ++ Y H Y L I +R AWSK+ + S + QYDW++ +DAD +I + I L+EF+ D++V D NG+N+GVF LR+S + LL EA+ ++N + ++WWEQ + +++ SE +R PQ FNSY T + G FIVHF G
Sbjct: 31 RFAIVSVITGP-VPKAYYAQAVTNRALYATRHSYTLRIFPTIDERRPTAWSKVLAMKSTIRSAQYDWILWMDADALITNFEISLDEFVPYGDEIDMLVATDCNGLNTGVFLLRSSPSALELLEEAYNGVHVSNNTIDHVWWEQMSFVQMYAASEDVRKRTYVLPQKSFNSYPTQHDCSGKSHSWSEGDFIVHFPG 224
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|612389881|ref|XP_007510461.1| (predicted protein [Bathycoccus prasinos] >gi|412990622|emb|CCO17994.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 102.064 bits (253), Expect = 9.901e-20 Identity = 72/228 (31.58%), Postives = 106/228 (46.49%), Query Frame = 0
Query: 192 AIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRKT-STKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWTITNEKMSN--IWWEQAAIMRLLQS-----------------EGIRNHVKYSPQMHFNS----YVTSQGHVKMDENGGRGPFIVHFAGL-GPAKWDMLLDVYAQRRN 394
A L D + S+ +K+ Y H YDL + +T T R AWSK+ + L +Y W++ LD DT+I + IRLE+ D ++D ++G D NG+NSGV+F++N+ W + LTE W + N +EQ A L Q+ E +R K Q FNS YV G F+VHFAG+ G A+ + Y + +N
Sbjct: 465 GFAILCICDAHTADICAASVANKRAYAKIHEYDLIFVTETLDTTRPMAWSKILAVQRYLPRYKWLLFLDIDTLIMNPDIRLEDIADDNYDQVIGADHNGINSGVWFVKNTRWMRWFLTELWAQEDLVRGNYVFHYEQRAFHHLFQTEVWSNNVGTSKKPYEGAEDVRKRSKVVNQCVFNSLLPWYVN-------------GDFVVHFAGMKGVAQCYLFWQYYEKAKN 679
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|1150749675|ref|XP_020248963.1| (probable alpha-1,6-mannosyltransferase MNN10 isoform X1 [Asparagus officinalis] >gi|1141975704|gb|ONK56930.1| uncharacterized protein A4U43_C10F14810 [Asparagus officinalis]) HSP 1 Score: 95.1301 bits (235), Expect = 3.778e-19 Identity = 72/192 (37.50%), Postives = 100/192 (52.08%), Query Frame = 0
Query: 213 DKKKYCDHHGYDLHIIRKTSTK-RAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFL-------DPH--HDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWTITN--EKMSNIWWEQAAIMRL---LQSEGIRNHVKYSP-QMHFNSYV---TSQGHVKMDENG--------GRGPFIVHFAGL 377
+K+ Y + GYD R + R WSK+ + LD+YDWV DADT++ + +I LE L D H HDL+V D NG+NSGVFF+R S WSK L + W T+ + S + AA+ L L SE +R+HV+ SP Q FNSYV T + ++ + +G F+VH AG
Sbjct: 7 NKRSYAERMGYDFLDARSLVDRSRPPNWSKILAVRHYLDRYDWVFWNDADTLVTNSNISLESILKAAIGHLDLHASHDLVVTEDTNGINSGVFFIRRSNWSKDFLDKWWNQTSFIQFGSTKSGDNAAMKHLVDGLTSEELRDHVRISPMQCLFNSYVWNLTWKSAYRLITSPQTIWKGAYSKGDFLVHLAGF 198
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|303274943|ref|XP_003056782.1| (hypothetical protein MICPUCDRAFT_56194 [Micromonas pusilla CCMP1545] >gi|226461134|gb|EEH58427.1| hypothetical protein MICPUCDRAFT_56194 [Micromonas pusilla CCMP1545]) HSP 1 Score: 97.0561 bits (240), Expect = 2.330e-18 Identity = 73/252 (28.97%), Postives = 112/252 (44.44%), Query Frame = 0
Query: 182 PVLMHGPPRIAIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRKTS-TKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWTITNEKMSN--IWWEQAAIMRLLQS------------------EGIRNHVKYSPQMHFNS----YVTSQGHVKMDENGGRGPFIVHFAGLGPAKWDMLL-----DVYAQRRNVENQDMTKE 403
P +H P A L+ D S +K++Y HGYDL ++ + + R AAWSK+ + L +Y+WV+ +D DT+I + +++LE+ D D ++ D NG+NSGV+ ++NS W L E W T+ +EQ A L Q+ +R H K Q FNS YVT G F+VH AGL W+ L+ D+ + + D ++E
Sbjct: 200 PEDLHHTPGAKYAILTLCDSNTGYICVASAANKRRYAAKHGYDLIVVTEVADASRPAAWSKILEVRKHLPKYEWVLFIDVDTLIMNPNVKLEDIADDSVDQVIAADHNGINSGVWLVKNSRWMMWFLDELWAQTDLVTGPYLFHYEQRAFHHLFQTVPWTKQKSVKGKLPYPKAAEVRAHSKIVNQCVFNSLLPWYVT-------------GDFVVHLAGLK-GVWECLIFWHYFDISQENSGMRITDWSRE 437
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|303282617|ref|XP_003060600.1| (hypothetical protein MICPUCDRAFT_59967 [Micromonas pusilla CCMP1545] >gi|226458071|gb|EEH55369.1| hypothetical protein MICPUCDRAFT_59967 [Micromonas pusilla CCMP1545]) HSP 1 Score: 95.5153 bits (236), Expect = 5.159e-18 Identity = 71/216 (32.87%), Postives = 106/216 (49.07%), Query Frame = 0
Query: 187 GPPRIAIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRK-TSTKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWT----ITNEKMSNIWWEQAAIMRLLQSEGIRNHVKYSPQMHFNS------YVTSQGHVKMDENGGRGPFIVHFAGL-GPAKWDMLLDVYA 390
G P++ I +L D+ ++ S S+ +K+ Y DHHGYD+ + R +WSKL + L YD++ +D DTVI + ++LE+ +D +D I+ D NG+N GV+ +RN+ WS L E W ++ +EQ A+ L QS R VK N+ V S + +G F+VH AGL G AK M YA
Sbjct: 157 GKPKVGIVSL--CDHNVDAICSASVANKQAYADHHGYDVIVDGDLIDESRPTSWSKLLVMRKYLPYYDFLFYVDVDTVITNVDVKLEDVVDYGYDQILAADKNGLNCGVWLIRNTPWSLWFLDEMWAQEQLVSPRTFVLFKFEQRAMHFLYQSRIWRTSVKGDAYKGANTIRARTKVVNSCVFNSLPAWYVKGDFLVHLAGLKGVAKCMMFRHYYA 370
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|563780368|ref|WP_023792378.1| (galactosyl transferase GMA12/MNN10 family [Candidatus Babela massiliensis] >gi|563405722|emb|CDK30750.1| galactosyl transferase GMA12/MNN10 family [Candidatus Babela massiliensis]) HSP 1 Score: 91.6633 bits (226), Expect = 1.035e-17 Identity = 56/193 (29.02%), Postives = 97/193 (50.26%), Query Frame = 0
Query: 191 IAIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIR-KTSTKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDG-NGVNSGVFFLRNSTWSKVLLTEAWTITNEKMSNI--WWEQAAIMRLLQSE-GIRNHVKYSPQMHFNSYVTSQGHVKMDENGGRGPFIVHFAGLG 378
+ IA + D + I+K+ Y + HGYD + + T RAA W K+ + L YDW+ LD+D +I + SI+LE +D +D I D +NSG F ++N+ WS+ L + W + + + ++ A++++ Q ++ H+K PQ +SY+ G +D G F++HFA +
Sbjct: 25 LKIALIGVHDERYEHIGKYAHINKRAYAEKHGYDYFLYNYRLDTGRAAYWDKVVALQRHLSDYDWLFWLDSDALIMNDSIKLESIIDEDYDFITTRDCLRSMNSGQFLIKNTQWSRNFL-KLWYSPKYEHTQVAPGFDNGALIQIYQEHPKVKEHIKIVPQRLLSSYLQCPGWFNIDGEYQPGDFVIHFAAVN 216
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|743776706|ref|XP_010918766.1| (PREDICTED: probable alpha-1,6-mannosyltransferase MNN10 [Elaeis guineensis]) HSP 1 Score: 93.2041 bits (230), Expect = 1.075e-17 Identity = 80/238 (33.61%), Postives = 107/238 (44.96%), Query Frame = 0
Query: 189 PRIAIATLSTADYVN----------NSAVSLSLIDKKKYCDHHGYDLHIIRK-TSTKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLD---------PHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWTITN--EKMSNIWWEQAAIMRLLQS---EGIRNHVKYSP-QMHFNSY-----------VTSQGHVKMDENGGRGPFIVHFAGLG-PAKW-DMLLD 387
PRIAI + S + V + +K+ Y + GYD R+ R +WSK+ + SLL YDWV DADT+I + I LE L+ DL+V D NGVN+GVFF R S WS+ L W T+ S I + A+ L+ S + ++NHV+ SP Q FNSY + S G F+VH AGL KW D +LD
Sbjct: 70 PRIAIVSFSEEERVAAGGGVGRRSFRGVMEAVRGNKRAYAERMGYDFFDARRLVDPSRPPSWSKILAVRSLLPYYDWVFWNDADTIITNPDISLENILNAAIGHSDFQASPDLVVTEDFNGVNAGVFFFRRSKWSEKFLDTWWNQTSFVRFGSTISGDNTALKHLISSLPPKELKNHVRTSPMQCLFNSYPWLPTWKNAYRLLSSPLKTWKGAYSNGDFMVHLAGLDEKKKWADRILD 307
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|612399109|ref|XP_007515074.1| (Subunit of Golgi mannosyltransferase complex (ISS) [Bathycoccus prasinos] >gi|412986888|emb|CCO15314.1| Subunit of Golgi mannosyltransferase complex (ISS) [Bathycoccus prasinos]) HSP 1 Score: 93.2041 bits (230), Expect = 4.564e-17 Identity = 61/210 (29.05%), Postives = 103/210 (49.05%), Query Frame = 0
Query: 189 PRIAIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRK-TSTKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWTITN-------------EK-------MSNIWWEQAAIMRLLQSEGIRNHVKYSPQMHFNSYVTSQGHVKMDENGGRGPFIVHFAGL 377
P++ I + + +S + S+ +K+ Y D HGYD+ K + R A+WSKL + L +YD+++ LD DTVI + ++LE+ +D +D I+ D NG+N GV+ +RN+ WS L E W+ + E+ +NIW ++ + ++ +R K FNS + E+G F++H AGL
Sbjct: 218 PKVGIIVICDGNV--HSICASSVANKQAYADRHGYDMIYDEKIVDSSRPASWSKLLAMRKYLPKYDFLLYLDVDTVIVNFDVQLEDIVDYEYDQILAADRNGLNCGVWMIRNTEWSLWFLDEMWSQSQLVGAAPWQMLFHFEQRAFHYLYQTNIWRQKVGGEQFEKANTVRARTKVVNACVFNS------QLAFYEDGD---FLIHLAGL 416
BLAST of EWM30575.1 vs. NCBI_GenBank
Match: gi|255085164|ref|XP_002505013.1| (hypothetical protein MICPUN_62693 [Micromonas commoda] >gi|226520282|gb|ACO66271.1| hypothetical protein MICPUN_62693 [Micromonas commoda]) HSP 1 Score: 92.0485 bits (227), Expect = 9.867e-17 Identity = 62/200 (31.00%), Postives = 99/200 (49.50%), Query Frame = 0
Query: 189 PRIAIATLSTADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRKT-STKRAAAWSKLPGILSLLDQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWT----ITNEKMSNIWWEQAAIMRLLQSEGIRNHVKYSPQMHFNS------YVTSQGHVKMDENGGRGPFIVHFAGL 377
P++ I +L D+ ++ + S+ +K+ Y D HGYD+ + + R +WSKL + L YD++ +D DT+I + ++LE+ +D +D I+ D NG+N GV+ +RN+ WS L E W + +EQ A+ L QS R VK P N+ V S + +G F+VH AGL
Sbjct: 196 PKVGIVSL--CDHNVDAICAASVANKQAYADRHGYDVIVDSEIIDESRPTSWSKLLAMRKYLPYYDYLFYVDVDTIIANVDVKLEDIVDYGYDQILAADRNGLNCGVWLIRNTPWSLWFLDEMWAQEQLVAPSTRVLFHYEQRAMHYLYQSRVWRRAVKGEPYKGANTIRARTKVVNSCVFNSLPAWYVKGDFVVHLAGL 393 The following BLAST results are available for this feature:
BLAST of EWM30575.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|