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Properties
| Property Name | Value |
|---|
| Product | peroxisomal -trans-enoyl- isomerase |
| Orig transcript id | gnl|cribi|Naga_100006g32.8647.mrna |
| Orig protein id | gnl|cribi|Naga_100006g32.8647 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1271953..1274624 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1134 ID=rna1134|Name=rna1134|organism=Nannochloropsis gaditana|type=mRNA|length=2076bp
ATGCAGGAAGCTACCGGAGCCCACTTAGAAGAGCCAGAGCTGCAAGACAA
TCACAACAACCTCAACAGCGTAGGACACTTTCTCGGGCATGATGGCGATG
GCTCAGCCATTAAAACTCAGGGCGTAAGGACCAGAGGCTCCTCGTATATG
CTACGGGAGCGTTCGACGCCGTCTTATCTTCATGCTTCGCGCCAAGAAGG
AGTTGAAGGCGTCGGTGCCTGCGGAGACCAGGCGGATGGGCAGGGGGTCT
CCGACAGGCAGACGAGAAGCAGGAGCAGGCAAAAGCCTGCGAGCTTTGCG
GTACATGGAACGCACGCCGTCGTAGACGAGGAGCATTCTAGCGGAAGCAT
TGACATGGGGAGCCTGGAAGAGAGCACGGTGGGTTCGCGTCGAGGCAACT
GCGAGGTGGAAGGCTGTGGGCGGAAGAGCCGAGGGTCGACCCGGCGATGC
CGTCGGCATGGAGGAGGGGCCATGTGCACCGTTCCAGGCTGCACTGGGTT
TTCGCGTCTGGAAGGGAAATGCTCCGTGCACGGCGGCGCGCAGATGTGTA
TTGTGATGGGCTGCGATAAGCGGGCTCGGTTCTACGGTCGCTGCACACGC
CATGGCGGCTTTGTCAACTGCCGTTTCCAAGGCTGTCTGTTGCGGGCAGT
CACCAAAGGTGTGTGCGCCAAGCACGGCGGGCGGGACCCGTGTCGGCACC
CTGGTTGCGCCCGGCCGGCCATCAAATCACAGGAGAACTGGTGCCAGGTG
CATGGACGCATGCTTGATTCTTTCCGGCAGCAGTCGCGCAGGGAGGTAGA
ACAGGGATTGCACCCGGTGACTTGCATGCATGTGGACTCGATGCACTCTA
TCCAGTGCATGGAACCGGCCTTGATGAGTGCAGGCCTGCCCTTCTTTTGC
CCCACCCATTTGATTCTGGCGAGGTGCGGTGGAAGCGTCGATTGCAGGGG
TAACAGCTACGTGCGAGGTCGCTGCGTCCGGCACGCCGGAGGAGACTCGA
GTGGGGCGGAATGTCAGCAGCCAGGCTGCACGCGCGATGCCTTGGGGGGG
GAGGGTCATGGCTTCTGTGAGAAACATCGAGATTTGGGCTTCTTCTGTAC
CCATACCTTTTGTGTGGCGCGCGCCAAATGTCACGGAGGGAAATGCGATA
TGCATCGGCTGATGGAATCGGACATGAAGGAGGCTGCCATGATCGTGGAA
GGAAGTGGGCCTAGGGAGGGAGATGATCAAGTGGCACCGGGTCCCGACAA
CGAGGGGGGTAATGGCAAAGATGAAGGAGGCGGTCGCAGTGCGGCGAGGG
AGGTCCGTGGAGAGAAGGGTGATATGGGCAGCCTGCAGTACTCCTCCGCC
TGTGTGTCGAATACAGCTGTACACGGACAGTCGGGAGGCGAGGGCGTGTG
GACGGCAACGAGGCCTGAAGCTCATTCTCACCTGATCCAGGAAGAGACCG
GGGTAGCAAAAGGTCAGGGCGACGGGATGAGCGCTTGGGATGACGTGAGT
GGGGAGGAGGGGGCTCAGATTGTCGAAAGCGGAGAAGACGAAGTCAAGAA
CGTGGAGGACATGATGTTCAGGAGACGCGAGGCCTGCATGCAAGAGGATT
TCGACACTGACAGCTTCTTTTCCTCCGAGGCGCGCGATGGGACTGCGGTC
GATGGGAGTGGAGAAAGGGACTCTGAGGCGTCGACTGTCTTGTATTTTGG
AGGCGTTTCGCGAGAGACGCTCTTCCGTCCCTCATGTGCCTGTGCTTCCG
TTCTCTCCCCGTCCTCGGCCATCTTGGCCGATTCTCCCCCTCCTGGATCG
CCTTCGTTGGAACAGACGGACGAGTTCTTTCCTTCCGAATCCTTTGCGCA
CTGGCACACCAGCGTCCGGGAGGCGATCATGCTGGCAAGGGTGGGGTCCC
TTGGAGGGAAGAATGAAGTTAATTACCACACAATGCACCGCAATATTTTT
CCTTATGCTTTTGCGATACACAGGTACTGTGTTCACACCAGACTGAATCG
ACGACTCATGCTTATTTTTGGACAAAGAATGCAGAAGCCTTGTAATTTAG
TAATGCACTTCAATTGGAATGCTTGA back to topprotein sequence of rna1134 >rna1134-protein ID=rna1134-protein|Name=rna1134|organism=Nannochloropsis gaditana|type=polypeptide|length=312bp
MLAHITRCLASTSTSTSFCLQFLVLVRQFLLTNVQACVIACARRRMADLI
IHRKDDNQEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRA
AMDESVTCLVLTGKGDYFSSGADLTDESWTPDPEHKMETSPAAIFMKALS
HFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYA
SSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLL
RLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDV
AFAIGQLLQSRL back to topmRNA from alignment at CM002456.1:1271953..1274624+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1134 ID=rna1134|Name=rna1134|organism=Nannochloropsis gaditana|type=mRNA|length=2672bp|location=Sequence derived from alignment at CM002456.1:1271953..1274624+ (Nannochloropsis gaditana)
CCATCACCATTGCTCCAtattttcctcgtcctcctccttgtccttccatG
TTATCTTCGTTTCCCTtttttgtcctcctttcacTTCATCTTCACGTACT
TGATTATATTTACGTATTGAAGCCGCACACTTTAATAAATGATGATCGAT
GTACAGATTTACCCACGATAGTATCGGCCGTCACTTGCGTGTGGCCTTTC
TGTCTACCCTGCATattccttttccatctcgCCGATCTTTCCACCATTGA
ATAGCGCTACGAACCTGAAGTCCACAATAAGTTCCTTTATAATGATTTTG
AAGATGATTTGTGTTCTGCCTTCCATTCATACTCTCTTCCATGCTTGTTA
TTGACCCGTAACGATGAAAAGCTTCATATCTGCCAGAATAAACTTCTAAA
ATCTCTGCCGGATATTTGACAGCTCTTAACACCATAAAATCAATCAGAAT
TTATTTCATAACGAGTGAAATGTCAAAATGGTTGCCCCTTGACAAAGCAA
ATTTATCAAACCTCATGTGGGCAGTTGCTTCATGTCCTGCCTCCCGGACA
CACAGCCATGGCCATAGACGTCGTGCATTTTTCTTTTAACGCATTTTAAA
GCAGCCAGACCGCAATTGATGGTTGCCTCTATCAGCCAAAGGGGTCGTCT
TGTTTCCCCGCGTCACTGCGTGGGAGCCTGGGATTAATTTATGCAAGGGC
AGCAGGGAGCTTGTCAATGCTCGCCCATATCACACGATGTCTCGCCTCGA
CCTCAACTTCCACTTCCTTTTGCCTTCAATTTCTTGTTCTCGTTCGACAA
TTTCTTCTCACAAATGTACAGGCGTGCGTTATTGCGTGCGCAAGGAGGCG
AATGGCAGACTTAATCATACACAGGAAGGATGACAATCAAGGCAAGTCCT
CTCTTTAAACTCGTGTGGCAATCGAGTATGCTCTTGCCTGTGCGATACTG
TCGTATTTGTTGCCTGAGGACTGGCGTCCAGGTATCTTTCACTACCAAAT
TTGGGTACTTTATATGTTCAAAAAGGAATTGCTCACAAAAGCGGGTACAT
CAGTCGAGCTGAGGACATGTTTATATCAACTTGTTTTGTATGTTTCCTTA
TCACCTTGTATTGCGTGTGGCAGAGAAGTACTTCCAAGAAGAACGACCTT
CCCCTGGCATCCtggtccttctccttgatcGACCGCGCAAGAAAAATGCC
ATAACCGGCGCCATGTATTTGGACTTGGCCGATGCCATGGATAGGGCGGC
AATGGACGAGTCGGTGACATGTTTGGTGCTCACAGGGAAAGGCGACTACT
TCTCATCGGGAGCAGATTTGACGGACGAATCGTGGACTCCCGACCCAGAG
CATAAAATGGAGACGTCACCGGCGGCCATTTTTATGAAGGTAAGTCCTGC
ATATTGTGACAGACTGTCCCGGTGCATGTGACTATCTTTGCATGAATCAG
GATCGTCTCCAAAGACCGCAactttgtccctcccttggcctttCCCGTGT
GGCGTGTCCTCAGATGCACGCACGCATCAAGCCTCCTGATTATTTTCTCG
GAGTCAGCGACGCTGACAGTGctattcctccttcccctctttcccaggcC
TTATCCCATTTTCCTAAATTAGTGGTAGCTGCCGTGAATGGCCCCGCGAT
CGGGATCGCCGTCACCCTTCTCTGCCACGTGGACCTTGCATACGCAGCCC
CTCACGCCACGTTCTGGACGCCCTTCTTACGGATGGCCATCGTCCCGGAG
tacgcctcctccgcccttttccctctcaccatGGGCCGTAGCAAGGCGAG
cgagctcctcttcttgggCAAGAAGTTCACCGCGACGGAGGCACAAGCCT
CGCACCTCATCAGCGAAATCATCCCCACGGACCGTTTGCTTACGGAGGTC
CTATTGCGgctggaggacatgctggCTAAACCGTTGGTTCAAAAATCCGT
TGTCGCTTTCAAGGCCCTCATGAAGAGCCAACGGttgcgggaggtggacg
acgTCATCAAAGCTGAGTTTCGTGCCTTTGACGATCGGATcgcggagggg
gacgtggcTTTCGCCATCGGTCAGCTCTTACAAAGCCGGCTATAACACAT
CGTGAGGTTCCCCCATCTtgtctgcccttccctccgcccaggcATGCTGT
GCCTGTGTGGCGCGCCCGCTCCCTTGTCCGTGCTGGACTTTTGAGGCCAT
GACCGAAaaggccgaagaggaggagtgagaagggagtgagGTCATTTGCG
TTATGTACATAAGATCCGTGGGTGGCGGTGTATGACGACAAAAAACAGAC
GGCAACGCCGGCAGAAGCGTCGACTTAACTCGGCGCACGCCCCAAGGGCG
AAGGCCGGGGAAGGGACTGTGCCCTCCCAAAGAACAAGGACAGGCGGAAG
GCTGTTCAAAGGCCCTGCCTGTTCGAGGGCCGCACGGCTTCACCTATCCG
GCCCGGCGGAGGGACACGCTTTCCATGTCAAGTTTTCTTTTTGGTACCCT
ACGGCTGCCACCAGATTCCCCGTTGCTCCatccgtcctccatcccttctc
ccaccccctcaCCGCCGCCGGTGCATGCCTCCAATACCGGTCATGGCTCC
CcggctcttccctccccctcctcgcctcagCCCTTGACCGAACATTCTCC
tggctcccgccccccctgtatc back to topCoding sequence (CDS) from alignment at CM002456.1:1271953..1274624+ >rna1134 ID=rna1134|Name=rna1134|organism=Nannochloropsis gaditana|type=CDS|length=2817bp|location=Sequence derived from alignment at CM002456.1:1271953..1274624+ (Nannochloropsis gaditana)
ATGCTCGCCCATATCACACGATGTCTCGCCTCGACCTCAACTTCCACTTC
CTTTTGCCTTCAATTTCTTGTTCTCGTTCGACAATTTCTTCTCACAAATG
TACAGGCGTGCGTTATTGCGTGCGCAAGGAGGCGAATGGCAGACTTAATC
ATACACAGGAAGGATGACAATCAAGAGAAGTACTTCCAAGAAGAACGACC
TTCCCCTGGCATCCtggtccttctccttgatcGACCGCGCAAGAAAAATG
CCATAACCGGCGCCATGTATTTGGACTTGGCCGATGCCATGGATAGGGCG
GCAATGGACGAGTCGGTGACATGTTTGGTGCTCACAGGGAAAGGCGACTA
CTTCTCATCGGGAGCAGATTTGACGGACGAATCGTGGACTCCCGACCCAG
AGCATAAAATGGAGACGTCACCGGCGGCCATTTTTATGAAGgcCTTATCC
CATTTTCCTAAATTAGTGGTAGCTGCCGTGAATGGCCCCGCGATCGGGAT
CGCCGTCACCCTTCTCTGCCACGTGGACCTTGCATACGCAGCCCCTCACG
CCACGTTCTGGACGCCCTTCTTACGGATGGCCATCGTCCCGGAGtacgcc
tcctccgcccttttccctctcaccatGGGCCGTAGCAAGGCGAGcgagct
cctcttcttgggCAAGAAGTTCACCGCGACGGAGGCACAAGCCTCGCACC
TCATCAGCGAAATCATCCCCACGGACCGTTTGCTTACGGAGGTCCTATTG
CGgctggaggacatgctggCTAAACCGTTGGTTCAAAAATCCGTTGTCGC
TTTCAAGGCCCTCATGAAGAGCCAACGGttgcgggaggtggacgacgTCA
TCAAAGCTGAGTTTCGTGCCTTTGACGATCGGATcgcggagggggacgtg
gcTTTCGCCATCGGTCAGCTCTTACAAAGCCGGCTATAAATGCTCGCCCA
TATCACACGATGTCTCGCCTCGACCTCAACTTCCACTTCCTTTTGCCTTC
AATTTCTTGTTCTCGTTCGACAATTTCTTCTCACAAATGTACAGGCGTGC
GTTATTGCGTGCGCAAGGAGGCGAATGGCAGACTTAATCATACACAGGAA
GGATGACAATCAAGAGAAGTACTTCCAAGAAGAACGACCTTCCCCTGGCA
TCCtggtccttctccttgatcGACCGCGCAAGAAAAATGCCATAACCGGC
GCCATGTATTTGGACTTGGCCGATGCCATGGATAGGGCGGCAATGGACGA
GTCGGTGACATGTTTGGTGCTCACAGGGAAAGGCGACTACTTCTCATCGG
GAGCAGATTTGACGGACGAATCGTGGACTCCCGACCCAGAGCATAAAATG
GAGACGTCACCGGCGGCCATTTTTATGAAGgcCTTATCCCATTTTCCTAA
ATTAGTGGTAGCTGCCGTGAATGGCCCCGCGATCGGGATCGCCGTCACCC
TTCTCTGCCACGTGGACCTTGCATACGCAGCCCCTCACGCCACGTTCTGG
ACGCCCTTCTTACGGATGGCCATCGTCCCGGAGtacgcctcctccgccct
tttccctctcaccatGGGCCGTAGCAAGGCGAGcgagctcctcttcttgg
gCAAGAAGTTCACCGCGACGGAGGCACAAGCCTCGCACCTCATCAGCGAA
ATCATCCCCACGGACCGTTTGCTTACGGAGGTCCTATTGCGgctggagga
catgctggCTAAACCGTTGGTTCAAAAATCCGTTGTCGCTTTCAAGGCCC
TCATGAAGAGCCAACGGttgcgggaggtggacgacgTCATCAAAGCTGAG
TTTCGTGCCTTTGACGATCGGATcgcggagggggacgtggcTTTCGCCAT
CGGTCAGCTCTTACAAAGCCGGCTATAAATGCTCGCCCATATCACACGAT
GTCTCGCCTCGACCTCAACTTCCACTTCCTTTTGCCTTCAATTTCTTGTT
CTCGTTCGACAATTTCTTCTCACAAATGTACAGGCGTGCGTTATTGCGTG
CGCAAGGAGGCGAATGGCAGACTTAATCATACACAGGAAGGATGACAATC
AAGAGAAGTACTTCCAAGAAGAACGACCTTCCCCTGGCATCCtggtcctt
ctccttgatcGACCGCGCAAGAAAAATGCCATAACCGGCGCCATGTATTT
GGACTTGGCCGATGCCATGGATAGGGCGGCAATGGACGAGTCGGTGACAT
GTTTGGTGCTCACAGGGAAAGGCGACTACTTCTCATCGGGAGCAGATTTG
ACGGACGAATCGTGGACTCCCGACCCAGAGCATAAAATGGAGACGTCACC
GGCGGCCATTTTTATGAAGgcCTTATCCCATTTTCCTAAATTAGTGGTAG
CTGCCGTGAATGGCCCCGCGATCGGGATCGCCGTCACCCTTCTCTGCCAC
GTGGACCTTGCATACGCAGCCCCTCACGCCACGTTCTGGACGCCCTTCTT
ACGGATGGCCATCGTCCCGGAGtacgcctcctccgcccttttccctctca
ccatGGGCCGTAGCAAGGCGAGcgagctcctcttcttgggCAAGAAGTTC
ACCGCGACGGAGGCACAAGCCTCGCACCTCATCAGCGAAATCATCCCCAC
GGACCGTTTGCTTACGGAGGTCCTATTGCGgctggaggacatgctggCTA
AACCGTTGGTTCAAAAATCCGTTGTCGCTTTCAAGGCCCTCATGAAGAGC
CAACGGttgcgggaggtggacgacgTCATCAAAGCTGAGTTTCGTGCCTT
TGACGATCGGATcgcggagggggacgtggcTTTCGCCATCGGTCAGCTCT
TACAAAGCCGGCTATAA back to top
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