EWM29558.1, cds1133 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|585112129|gb|EWM29558.1| (peroxisomal -trans-enoyl- isomerase [Nannochloropsis gaditana]) HSP 1 Score: 638.647 bits (1646), Expect = 0.000e+0 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0
Query: 1 MLAHITRCLASTSTSTSFCLQFLVLVRQFLLTNVQACVIACARRRMADLIIHRKDDNQEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGADLTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQLLQSRL 312
MLAHITRCLASTSTSTSFCLQFLVLVRQFLLTNVQACVIACARRRMADLIIHRKDDNQEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGADLTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQLLQSRL
Sbjct: 1 MLAHITRCLASTSTSTSFCLQFLVLVRQFLLTNVQACVIACARRRMADLIIHRKDDNQEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGADLTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQLLQSRL 312
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|971520590|dbj|GAQ77577.1| (enoyl-CoA isomerase [Klebsormidium nitens]) HSP 1 Score: 221.09 bits (562), Expect = 1.182e-67 Identity = 109/242 (45.04%), Postives = 158/242 (65.29%), Query Frame = 0
Query: 70 GILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGADLTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQLLQSR 311
G+ +++ RPR+KNA+ +Y+DL A D D + ++LTG+GDYFSSGAD++ S +P+ E++P FM L FPK+VVAAVNGPA+GI VTLL H D+AYA+ ATFWTP LR+A VPE+ S+ FP MG S A+E+L + ++ +A EAQ + LISE+ P + + EV R+ MLA+PL +S+ FK +++ RL E++ V + E R A+GD+ AI L ++R
Sbjct: 15 GLAAIVISRPRRKNAMNDQVYMDLCAAFDHVQSDPHIHAVILTGEGDYFSSGADVSAAS---EPKVDAESAPVGQFMLTLLRFPKVVVAAVNGPAVGIGVTLLPHCDIAYASERATFWTPSLRVAWVPEFCSTVTFPQIMGPSLANEMLLMSRQLSAKEAQQARLISEVFPAETFMAEVQSRVRHMLAQPLAGQSLPLFKKMIRRPRLAELERVFREEMAELGKRSAQGDITQAIQALWEAR 253
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|301113578|ref|XP_002998559.1| (enoyl-CoA hydratase/isomerase family, putative [Phytophthora infestans T30-4] >gi|262111860|gb|EEY69912.1| enoyl-CoA hydratase/isomerase family, putative [Phytophthora infestans T30-4]) HSP 1 Score: 182.57 bits (462), Expect = 1.486e-52 Identity = 99/236 (41.95%), Postives = 138/236 (58.47%), Query Frame = 0
Query: 71 ILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGAD-------LTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGD 299
+ V+ + RPR KNA A+Y L A+D DES+ VLTG GDYF+SGAD L D S P + SP+ FM + KL++AAVNGPAIGI VTLL H DL YAA ATFWTPFLR+ +VPE+ASS FP +G A+ L+ K +TA EA +++++ E+ PT L +VL L ++ + S+ +K L++ +R ++ + + EF D R A G+
Sbjct: 20 VFVVEMSRPRAKNAFNDALYEQLTAALDAFEADESLHAFVLTGHGDYFTSGADVKETAAILGDGSVRPPSQ-----SPSHTFMHKMLDCNKLLIAAVNGPAIGIGVTLLMHCDLVYAADSATFWTPFLRIGVVPEFASSYTFPHLLGPIVANNLVIRSKVYTAQEALSTNIVGEVFPTTGFLEKVLAELTPLVNNRFNKTSLPVYKTLLRRERAPKIREALFYEFEQLDRRAASGE 250
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|566019312|gb|ETI42223.1| (hypothetical protein F443_12621 [Phytophthora parasitica P1569]) HSP 1 Score: 182.57 bits (462), Expect = 1.883e-52 Identity = 103/257 (40.08%), Postives = 144/257 (56.03%), Query Frame = 0
Query: 58 QEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGAD-------LTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQL 307
QEK + I V+ + RPR KNA A+Y L A+D D+S+ VLTG GDYF+SGAD L D S P + SP+ FM + KL++AAVNGPAIGI VTLL H DL YAA ATFWTPFLR+ +VPE+ASS FP +G + A+ L+ K +TA EA + ++ EI PT+ L V L ++ + S+ +K+L++ +R ++ + + EF D R A G+ + +L
Sbjct: 7 QEKVVRTHAREGCIFVVEMCRPRAKNAFNDALYEQLTAALDEFEADDSLHVFVLTGHGDYFTSGADVKETAAILGDGSVRPPSQ-----SPSHTFMHKMLDCKKLLIAAVNGPAIGIGVTLLMHCDLVYAADSATFWTPFLRIGVVPEFASSYTFPHLLGPTVANNLVIRSKVYTAQEALNASIVGEIFPTNGFLEAVFAELTPLVNNRFNKTSLPVYKSLLRRERAPKIREALFYEFEQLDRRAASGEFLATVTEL 258
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|570979007|gb|ETP40076.1| (hypothetical protein F442_12538 [Phytophthora parasitica P10297]) HSP 1 Score: 182.185 bits (461), Expect = 2.052e-52 Identity = 103/257 (40.08%), Postives = 144/257 (56.03%), Query Frame = 0
Query: 58 QEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGAD-------LTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQL 307
QEK + I V+ + RPR KNA A+Y L A+D D+S+ VLTG GDYF+SGAD L D S P + SP+ FM + KL++AAVNGPAIGI VTLL H DL YAA ATFWTPFLR+ +VPE+ASS FP +G + A+ L+ K +TA EA + ++ EI PT+ L V L ++ + S+ +K+L++ +R ++ + + EF D R A G+ + +L
Sbjct: 7 QEKVVRTHAREGCIFVVEMCRPRAKNAFNDALYEQLTAALDEFEADDSLHAFVLTGHGDYFTSGADVKETAAILGDGSVRPPSQ-----SPSHTFMHKMLDCKKLLIAAVNGPAIGIGVTLLMHCDLVYAADSATFWTPFLRIGVVPEFASSYTFPHLLGPTVANNLVIRSKVYTAQEALNASIVGEIFPTNGFLEAVFAELTPLVNNRFNKTSLPVYKSLLRRERAPKIREALFYEFEQLDRRAASGEFLATVTEL 258
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|567956620|gb|ETK82240.1| (hypothetical protein L915_12351 [Phytophthora parasitica] >gi|568014694|gb|ETL88871.1| hypothetical protein L917_12107 [Phytophthora parasitica] >gi|568044941|gb|ETM42112.1| hypothetical protein L914_12191 [Phytophthora parasitica] >gi|570946701|gb|ETP11958.1| hypothetical protein F441_12590 [Phytophthora parasitica CJ01A1] >gi|970631893|gb|KUF78340.1| Enoyl-CoA delta isomerase 2 [Phytophthora nicotianae] >gi|970633911|gb|KUF79368.1| Enoyl-CoA delta isomerase 2 [Phytophthora nicotianae]) HSP 1 Score: 182.185 bits (461), Expect = 2.386e-52 Identity = 103/257 (40.08%), Postives = 144/257 (56.03%), Query Frame = 0
Query: 58 QEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGAD-------LTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQL 307
QEK + I V+ + RPR KNA A+Y L A+D D+S+ VLTG GDYF+SGAD L D S P + SP+ FM + KL++AAVNGPAIGI VTLL H DL YAA ATFWTPFLR+ +VPE+ASS FP +G + A+ L+ K +TA EA + ++ EI PT+ L V L ++ + S+ +K+L++ +R ++ + + EF D R A G+ + +L
Sbjct: 7 QEKVVRTHVREGCIFVVEMCRPRAKNAFNDALYEQLTAALDEFEADDSLHVFVLTGHGDYFTSGADVKETAAILGDGSVRPPSQ-----SPSHTFMHKMLDCKKLLIAAVNGPAIGIGVTLLMHCDLVYAADSATFWTPFLRIGVVPEFASSYTFPHLLGPTVANNLVIRSKVYTAQEALNASIVGEIFPTNGFLEAVFAELTPLVNNRFNKTSLPVYKSLLRRERAPKIREALFYEFEQLDRRAASGEFLATVTEL 258
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|567985288|gb|ETL35633.1| (hypothetical protein L916_12267 [Phytophthora parasitica]) HSP 1 Score: 182.185 bits (461), Expect = 2.464e-52 Identity = 103/257 (40.08%), Postives = 144/257 (56.03%), Query Frame = 0
Query: 58 QEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGAD-------LTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQL 307
QEK + I V+ + RPR KNA A+Y L A+D D+S+ VLTG GDYF+SGAD L D S P + SP+ FM + KL++AAVNGPAIGI VTLL H DL YAA ATFWTPFLR+ +VPE+ASS FP +G + A+ L+ K +TA EA + ++ EI PT+ L V L ++ + S+ +K+L++ +R ++ + + EF D R A G+ + +L
Sbjct: 7 QEKVVRTHVREGCIFVVEMCRPRAKNAFNDALYEQLTAALDEFEADDSLHAFVLTGHGDYFTSGADVKETAAILGDGSVRPPSQ-----SPSHTFMHKMLDCKKLLIAAVNGPAIGIGVTLLMHCDLVYAADSATFWTPFLRIGVVPEFASSYTFPHLLGPTVANNLVIRSKVYTAQEALNASIVGEIFPTNGFLEAVFAELTPLVNNRFNKTSLPVYKSLLRRERAPKIREALFYEFEQLDRRAASGEFLATVTEL 258
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|675200177|ref|XP_008908973.1| (hypothetical protein PPTG_13262 [Phytophthora parasitica INRA-310] >gi|568091083|gb|ETN05909.1| hypothetical protein PPTG_13262 [Phytophthora parasitica INRA-310]) HSP 1 Score: 182.185 bits (461), Expect = 2.545e-52 Identity = 103/257 (40.08%), Postives = 144/257 (56.03%), Query Frame = 0
Query: 58 QEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGAD-------LTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQL 307
QEK + I V+ + RPR KNA A+Y L A+D D+S+ VLTG GDYF+SGAD L D S P + SP+ FM + KL++AAVNGPAIGI VTLL H DL YAA ATFWTPFLR+ +VPE+ASS FP +G + A+ L+ K +TA EA + ++ EI PT+ L V L ++ + S+ +K+L++ +R ++ + + EF D R A G+ + +L
Sbjct: 7 QEKVVRTHVREGCIFVVEMCRPRAKNAFNDALYEQLTAALDEFEADDSLHAFVLTGHGDYFTSGADVKETAAILGDGSVRPPSQ-----SPSHTFMHKMLDCKKLLIAAVNGPAIGIGVTLLMHCDLVYAADSATFWTPFLRIGVVPEFASSYTFPHLLGPTVANNLVIRSKVYTAQEALNASIVGEIFPTNGFLEAVFAELTPLVNNRFNKTSLPVYKSLLRRERAPKIREALFYEFEQLDRRAASGEFLATVTEL 258
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|570322878|gb|ETO70826.1| (hypothetical protein F444_12738 [Phytophthora parasitica P1976] >gi|570322898|gb|ETO70846.1| hypothetical protein F444_12726 [Phytophthora parasitica P1976]) HSP 1 Score: 178.718 bits (452), Expect = 2.658e-51 Identity = 98/237 (41.35%), Postives = 136/237 (57.38%), Query Frame = 0
Query: 78 RPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGAD-------LTDESWTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGDVAFAIGQL 307
RPR KNA A+Y L A+D D+S+ VLTG GDYF+SGAD L D S P + SP+ FM + KL++AAVNGPAIGI VTLL H DL YAA ATFWTPFLR+ +VPE+ASS FP +G + A+ L+ K +TA EA + ++ EI PT+ L V L ++ + S+ +K+L++ +R ++ + + EF D R A G+ + +L
Sbjct: 3 RPRAKNAFNDALYEQLTAALDEFEADDSLHVFVLTGHGDYFTSGADVKETAAILGDGSVRPPSQ-----SPSHTFMHKMLDCKKLLIAAVNGPAIGIGVTLLMHCDLVYAADSATFWTPFLRIGVVPEFASSYTFPHLLGPTVANNLVIRSKVYTAQEALNASIVGEIFPTNGFLEAVFAELTPLVNNRFNKTSLPVYKSLLRRERAPKIREALFYEFEQLDRRAASGEFLATVTEL 234
BLAST of EWM29558.1 vs. NCBI_GenBank
Match: gi|695447324|ref|XP_009534708.1| (hypothetical protein PHYSODRAFT_361865 [Phytophthora sojae] >gi|348670025|gb|EGZ09847.1| hypothetical protein PHYSODRAFT_361865 [Phytophthora sojae]) HSP 1 Score: 179.104 bits (453), Expect = 3.501e-51 Identity = 101/248 (40.73%), Postives = 141/248 (56.85%), Query Frame = 0
Query: 57 NQEKYFQEERPSPGILVLLLDRPRKKNAITGAMYLDLADAMDRAAMDESVTCLVLTGKGDYFSSGADLTDES-----WTPDPEHKMETSPAAIFMKALSHFPKLVVAAVNGPAIGIAVTLLCHVDLAYAAPHATFWTPFLRMAIVPEYASSALFPLTMGRSKASELLFLGKKFTATEAQASHLISEIIPTDRLLTEVLLRLEDMLAKPLVQKSVVAFKALMKSQRLREVDDVIKAEFRAFDDRIAEGD 299
QEK + S I V + RPR KNA A+Y L A+D D+S+ VLTG GDYF+SGAD+ + + T P K SP+ FM + KL+VAAVNGPAIGI VTLL H DL YAA AT WTPFLR+ +VPE+ASS FP +G + A+ L+ K + A EA + ++ E+ PT+ L VL L ++ + S+ +K+L++ +R ++ + + EF D R A G+
Sbjct: 6 QQEKVVRSYVHSGCIYVAEMRRPRAKNAFNDALYQQLTAALDEFEADDSLQAFVLTGHGDYFTSGADVKETAAILGDGTIRPPSK---SPSHAFMHKMLDCKKLLVAAVNGPAIGIGVTLLMHCDLVYAADSATLWTPFLRIGVVPEFASSYTFPHLLGPTVANNLVIRSKVYKAQEALDAKIVGEVFPTNGFLETVLAELTPLVTNRFNRTSLPVYKSLLRRERAPKIREALFYEFEQLDRRAASGE 250 The following BLAST results are available for this feature:
BLAST of EWM29558.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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