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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100006g41.8622.mrna |
| Orig protein id | gnl|cribi|Naga_100006g41.8622 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1247180..1249040 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1126 ID=rna1126|Name=rna1126|organism=Nannochloropsis gaditana|type=mRNA|length=1117bp
GGCTCACTTTTTTTTCCATGATAAAACGACGCATGTTTTCACACTTTCTT
AATCGGACAACCCCTTCCTAGTGGCTGTATCCGGTCTGCTGTGCGTGAAT
TCTCAACGCGGCGGCTCCAATTACCGAAGCCGGTGCGCAGACAAGGGAGG
AGGTTTTTCATGAACATCAGCAAGCACAGTCCTGCATTGAATCGTCCCAT
GATAGCCAAAGGCGACCCATTTGGTCGCCCTGCACAGGCGGAGGGCTACT
CAGCATTTCGTCCGAATTATCCCGACGCGTTGATGGCAGGTGTGGAGGTC
ATTCTTCGTGCACAGGGGTGTATGGATAGCAGGGCAAAGGATGGGAGCAT
GCTAGTCGATATTTGTACTGGCTCGGGGCAAGTATTAAGGAAACTAGCAA
GGTATTTCGACCACGCCAAGGGTGTTGATCAAAGCGCTGCCCAATTGACG
AACGCAACAAAAGGATCCAACGTTGAATATTTGCAGGCGGATGCACTTTC
AGTTCCTTTGCCAGATGGCAGCGCATCGGTGGTAACATGCGCTCAAGCAA
TGCACTGGTTGGATATTCCATCCTTTCTGAGAGGCGTGGATAGACTCCTC
CGCCCGGAAGGAGTCTTGGTCGTACTTGGGTATCCCAGGAGTCACATTCC
TAAGATGCCACAGGCCGACGCAGCCATGATCGAATGGTACGCGTCACTGG
ACGATGTCTGGGATTGCGATCGGGCCCTGCTGGACATGGAGTTTGCGGGG
ACAGACTACACTCCCTTCGTCCAATTTAGCAAGCAGAAGGTGGAAGAGAC
GCACATGATGAGTGTGGAGCATTTGGTCGGTTATTTGGACACATGGTCGT
CCTTCAGGACGTGGAAGGAGCACCACCCAGACGTGAATCCAGACACATTG
CAGGTGCTGAGCGCGCGCTTGCAGGCAGCTCTCGCAGCAGAGGGAGAGGG
CAGGACCCTGTTGCCTGTGGAATTCTCTTTTTTTGCCATCTTCTTGCGGC
GTCCTGGGGATGGTAGAGCATCGAAGTGAGGAGAACGTCGCACAGTTTTG
AGGCCCATTGGTGTGTGCCTGTACACGGGAAAGAAATATCTGATTGATGG
TGATATCGCTACTTATG back to topprotein sequence of rna1126 >rna1126-protein ID=rna1126-protein|Name=rna1126|organism=Nannochloropsis gaditana|type=polypeptide|length=231bp
MAGKRPRPPVQVVVAPSIPSPYEYKLQLQREQGERQDEAANGSYKRARSG
GALSNGNNAAERAEFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKA
PAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSAAALANQI
LDDGGRRKHDSSGKIGETPYPVLGKMKGGTLFLNRGTIQRATMGKRGGRG
GDKRGGRGRGEAVGSGRAAGRGRTAGKQRKG back to topmRNA from alignment at CM002456.1:1247180..1249040- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1126 ID=rna1126|Name=rna1126|organism=Nannochloropsis gaditana|type=mRNA|length=1861bp|location=Sequence derived from alignment at CM002456.1:1247180..1249040- (Nannochloropsis gaditana)
GCGTCTTTTTTTACCGCACACAAGGCGCACCATAACGCAACGCAACTGCA
CGCACCTACACACAGAGAAGGTACATCATGGCTGGTAAGCGCCCTCGTCC
GCCTGTTCAAGTGGTTGTTGCGCCCTCAATACCCTCCCCTTACGAGTACA
AATTGCAGCTTCAACGGGAGCAAGGAGAGCGACAAGATGAGGCAGCCAAT
GGTTCATATAAACGCGCCCGCTCAGGTGGCGCTTTGTCTAATGGCAACAA
TGCGGCAGAACGGGCAGAGTTTAAGAAGATGTGGAAGAGCGTGATGGATC
TCGGAGCCATGCAATTGACGGGCTACGAGAAAAAAGCCTACGATGCACGT
CGGATTGTCGAGTTGGGAGGCAAAGCACCCGCGGCCATCAAGACTCCATT
CAATATTCTGATGGGCAAACGTGCAAAAGCAAAACAACGTGATGCACGCC
GTGACAATGACATTCGCGAATCGGGTGTGGTCGTGGCAAAAAAGCGGCAA
TCTGCGGCAGCACTTGCAAACCAGATTCTAGACGATGGCGGTAGACGGAA
GCATGACAGTAGCGGCAAGATCGGTGAGACGCCTTACCCTGTACTCGGGA
AGATGAAAGGTGGAACTTTATTTTTGAACAGGGGGACCATTCAGAGAGCG
ACCATGGGCAAACGGGGGGGAAGAGGTGGTGATAAGAGAGGTGGGCGTGG
GAGGGGAGAGGCAGTGGGCAGTGGGAGGGCAGCTGGCAGGGGGCGTACAG
CGGGGAAGCAGAGAAAAGGGTAGCTGGTTAAAAATGCAGCATTGGAGGAA
TGCAAGGTGCGTTTTTTACGCGTACGATATTTTTCTGCGGTATGGGTGAG
AGGGTAATTTTGCAAAGAAACCAGAGAAAGTGTCTTCCTGCCATCAGTTC
TATACGCGGCAGCCATAAGTAGCGATATCACCATCAATCAGATATTTCTT
TCCCGTGTACAGGCACACACCAATGGGCCTCAAAACTGTGCGACGTTCTC
CTCACTTCGATGCTCTACCATCCCCAGGACGCCGCAAGAAGATGGCAAAA
AAAGAGAATTCCACAGGCAACAGGGTCCTGCCCTCTCCCTCTGCTGCGAG
AGCTGCCTGCAAGCGCGCGCTCAGCACCTGCAATGTGTCTGGATTCACGT
CTGGGTGGTGCTCCTTCCACGTCCTGAAGGACGACCATGTGTCCAAATAA
CCGACCAAATGCTCCACACTCATCATGTGCGTCTCTTCCACCTTCTGCTT
GCTAAATTGGACGAAGGGAGTGTAGTCTGTCCCCGCAAACTCCATGTCCA
GCAGGGCCCGATCGCAATCCCAGACATCGTCCAGTGACGCGTACCATTCG
ATCATGGCTGCGTCGGCCTGTGGCATCTTAGGAATGTGACTCCTGGGATA
CCCAAGTACGACCAAGACTCCTTCCGGGCGGAGGAGTCTATCCACGCCTC
TCAGAAAGGATGGAATATCCAACCAGTGCATTGCTTGAGCGCATGTTACC
ACCGATGCGCTGCCATCTGGCAAAGGAACTGAAAGTGCATCCGCCTGCAA
ATATTCAACGTTGGATCCTTTTGTTGCGTTCGTCAATTGGGCAGCGCTTT
GATCAACACCCTTGGCGTGGTCGAAATACCTTGCTAGTTTCCTTAATACT
TGCCCCGAGCCAGTACAAATATCGACTAGCATGCTCCCATCCTTTGCCCT
GCTATCCATACACCCCTGTGCACGAAGAATGACCTCCACACCTGCCATCA
ACGCGTCGGGATAATTCGGACGAAATGCTGAGTAGCCCTCCGCCTGTGCA
GGGCGACCAAATGGGTCGCCTTTGGCTATCATGGGACGATTCAATGCAGG
ACTGTGCTTGC back to topCoding sequence (CDS) from alignment at CM002456.1:1247180..1249040- >rna1126 ID=rna1126|Name=rna1126|organism=Nannochloropsis gaditana|type=CDS|length=696bp|location=Sequence derived from alignment at CM002456.1:1247180..1249040- (Nannochloropsis gaditana)
ATGGCTGGTAAGCGCCCTCGTCCGCCTGTTCAAGTGGTTGTTGCGCCCTC
AATACCCTCCCCTTACGAGTACAAATTGCAGCTTCAACGGGAGCAAGGAG
AGCGACAAGATGAGGCAGCCAATGGTTCATATAAACGCGCCCGCTCAGGT
GGCGCTTTGTCTAATGGCAACAATGCGGCAGAACGGGCAGAGTTTAAGAA
GATGTGGAAGAGCGTGATGGATCTCGGAGCCATGCAATTGACGGGCTACG
AGAAAAAAGCCTACGATGCACGTCGGATTGTCGAGTTGGGAGGCAAAGCA
CCCGCGGCCATCAAGACTCCATTCAATATTCTGATGGGCAAACGTGCAAA
AGCAAAACAACGTGATGCACGCCGTGACAATGACATTCGCGAATCGGGTG
TGGTCGTGGCAAAAAAGCGGCAATCTGCGGCAGCACTTGCAAACCAGATT
CTAGACGATGGCGGTAGACGGAAGCATGACAGTAGCGGCAAGATCGGTGA
GACGCCTTACCCTGTACTCGGGAAGATGAAAGGTGGAACTTTATTTTTGA
ACAGGGGGACCATTCAGAGAGCGACCATGGGCAAACGGGGGGGAAGAGGT
GGTGATAAGAGAGGTGGGCGTGGGAGGGGAGAGGCAGTGGGCAGTGGGAG
GGCAGCTGGCAGGGGGCGTACAGCGGGGAAGCAGAGAAAAGGGTAG back to top
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