EWM29533.1, cds1125 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29533.1 vs. NCBI_GenBank
Match: gi|585112104|gb|EWM29533.1| (hypothetical protein Naga_100006g41 [Nannochloropsis gaditana]) HSP 1 Score: 456.833 bits (1174), Expect = 2.408e-162 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query: 1 MAGKRPRPPVQVVVAPSIPSPYEYKLQLQREQGERQDEAANGSYKRARSGGALSNGNNAAERAEFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSAAALANQILDDGGRRKHDSSGKIGETPYPVLGKMKGGTLFLNRGTIQRATMGKRGGRGGDKRGGRGRGEAVGSGRAAGRGRTAGKQRKG 231
MAGKRPRPPVQVVVAPSIPSPYEYKLQLQREQGERQDEAANGSYKRARSGGALSNGNNAAERAEFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSAAALANQILDDGGRRKHDSSGKIGETPYPVLGKMKGGTLFLNRGTIQRATMGKRGGRGGDKRGGRGRGEAVGSGRAAGRGRTAGKQRKG
Sbjct: 1 MAGKRPRPPVQVVVAPSIPSPYEYKLQLQREQGERQDEAANGSYKRARSGGALSNGNNAAERAEFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSAAALANQILDDGGRRKHDSSGKIGETPYPVLGKMKGGTLFLNRGTIQRATMGKRGGRGGDKRGGRGRGEAVGSGRAAGRGRTAGKQRKG 231
BLAST of EWM29533.1 vs. NCBI_GenBank
Match: gi|553195975|ref|XP_005856241.1| (hypothetical protein NGA_2008000, partial [Nannochloropsis gaditana CCMP526] >gi|422292814|gb|EKU20116.1| hypothetical protein NGA_2008000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 422.55 bits (1085), Expect = 6.219e-149 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
Query: 1 MAGKRPRPPVQVVVAPSIPSPYEYKLQLQREQGERQDEAANGSYKRARSGGALSNGNNAAERAEFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSAAALANQILDDGGRRKHDSSGKIGETPYPVLGKMKGGTLFLNRGTIQRATMGKRGGRGGDKRGGRGRGEA 212
MAGKRPRPPVQVVVAPSIPSPYEYKLQLQREQGERQDEAANGSYKRARSGGALSNGNNAAERAEFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSAAALANQILDDGGRRKHDSSGKIGETPYPVLGKMKGGTLFLNRGTIQRATM KRGGRGGDKRGGRGRGEA
Sbjct: 7 MAGKRPRPPVQVVVAPSIPSPYEYKLQLQREQGERQDEAANGSYKRARSGGALSNGNNAAERAEFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSAAALANQILDDGGRRKHDSSGKIGETPYPVLGKMKGGTLFLNRGTIQRATMAKRGGRGGDKRGGRGRGEA 218
BLAST of EWM29533.1 vs. NCBI_GenBank
Match: gi|298713800|emb|CBJ27172.1| (hypothetical protein Esi_0058_0057 [Ectocarpus siliculosus]) HSP 1 Score: 69.3218 bits (168), Expect = 8.048e-11 Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 0
Query: 64 EFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVV 136
+++++WK+V DLG+ Q TG EKKAY+AR+IVE GG+AP + P+ +L G R KAKQR+ RR+ E+GVV
Sbjct: 68 DYQQIWKAVTDLGSEQFTGKEKKAYEARKIVERGGRAPKDPRMPYVMLQGLRKKAKQREERREAMEAEAGVVT 140
BLAST of EWM29533.1 vs. NCBI_GenBank
Match: gi|813181594|ref|XP_012206150.1| (hypothetical protein SPRG_10007 [Saprolegnia parasitica CBS 223.65] >gi|641529001|gb|KDO23199.1| hypothetical protein SPRG_10007 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 66.6254 bits (161), Expect = 2.912e-10 Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = 0
Query: 46 RARSGGALSNGNNAAERA-EFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSA 143
R R GA + A E A +F++ SV GA TG E+K + RIV LGGKAP K P+N LM R AK+R+ + + ++ SG+V KK+ +A
Sbjct: 34 RPRKAGANEPLSRAEEVAKQFRETLDSVKSFGATHATGKERKKLEIERIVALGGKAPKEQKRPYNQLMAMRKAAKKREEKHEELVKASGIVTGKKKTTA 132
BLAST of EWM29533.1 vs. NCBI_GenBank
Match: gi|470491390|ref|XP_004345887.1| (hypothetical protein ACA1_182660 [Acanthamoeba castellanii str. Neff] >gi|440800304|gb|ELR21343.1| hypothetical protein ACA1_182660 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 64.3142 bits (155), Expect = 7.720e-9 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 64 EFKKMWKSVMDLGAMQLT-GYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQ 141
E + + + V+DLGA Q +K+AY+ R+I+ LGG+A K P+NILMG + K K+R+ +R +E G+ VAKK++
Sbjct: 92 ELQAITREVLDLGATQFKRKKQKRAYEERKIISLGGQASKPDKVPYNILMGMKKKQKERELKRTELDKERGMFVAKKKK 170
BLAST of EWM29533.1 vs. NCBI_GenBank
Match: gi|669141610|ref|XP_008606367.1| (hypothetical protein SDRG_02550 [Saprolegnia diclina VS20] >gi|530741651|gb|EQC39893.1| hypothetical protein SDRG_02550 [Saprolegnia diclina VS20]) HSP 1 Score: 62.3882 bits (150), Expect = 1.410e-8 Identity = 38/99 (38.38%), Postives = 54/99 (54.55%), Query Frame = 0
Query: 46 RARSGGALSNGNNAAERA-EFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSA 143
R R GA + A E A +F++ SV G TG E+K + RIV LGGKAP K P++ LM R AK+R+ + ++ SG+V KK+ +A
Sbjct: 34 RPRKAGANEPLSRAEEVAKQFRETLDSVKSFGVTHATGKERKKLEIERIVTLGGKAPKQQKRPYDQLMAMRKAAKKREEKHAELVKASGIVTGKKKTTA 132
BLAST of EWM29533.1 vs. NCBI_GenBank
Match: gi|675205381|ref|XP_008911575.1| (hypothetical protein PPTG_16046 [Phytophthora parasitica INRA-310] >gi|566014811|gb|ETI37722.1| hypothetical protein F443_16429 [Phytophthora parasitica P1569] >gi|567952165|gb|ETK77846.1| hypothetical protein L915_15969 [Phytophthora parasitica] >gi|567980829|gb|ETL31279.1| hypothetical protein L916_15865 [Phytophthora parasitica] >gi|568010452|gb|ETL84640.1| hypothetical protein L917_15663 [Phytophthora parasitica] >gi|568040320|gb|ETM37780.1| hypothetical protein L914_15797 [Phytophthora parasitica] >gi|568088169|gb|ETN03031.1| hypothetical protein PPTG_16046 [Phytophthora parasitica INRA-310] >gi|570318568|gb|ETO66516.1| hypothetical protein F444_16398 [Phytophthora parasitica P1976] >gi|570942373|gb|ETP07630.1| hypothetical protein F441_16258 [Phytophthora parasitica CJ01A1] >gi|570972881|gb|ETP35659.1| hypothetical protein F442_16273 [Phytophthora parasitica P10297]) HSP 1 Score: 58.5362 bits (140), Expect = 2.748e-7 Identity = 31/84 (36.90%), Postives = 48/84 (57.14%), Query Frame = 0
Query: 62 RAEFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAKKRQSAAA 145
R EF + SV++ L G EKK ++A++I LGGKA P+ IL+G + K R RR+ ++ES VV K++ S+ +
Sbjct: 51 RKEFDDTFDSVLEFATSNLKGKEKKIHEAKKIEALGGKAAKNRSVPYKILIGLKTKGAARKQRREELLKESDVVTGKRKSSSKS 134 The following BLAST results are available for this feature:
BLAST of EWM29533.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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