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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100006g45.8687.mrna |
| Orig protein id | gnl|cribi|Naga_100006g45.8687 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1243485..1244298 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1122 ID=rna1122|Name=rna1122|organism=Nannochloropsis gaditana|type=mRNA|length=4103bp
GGGGCCAGCATTGGAAAAGTATAAGATCTTTACCGAATTTCTACACGCAT
ATGGCTTTACACAGGTGTCAAAGCCGTCTAGGCGCTGATGGGGGACAAAT
ACATTCGCACATCGATCTCTTTTGAGCACCTGATAGATGACCCAGGATGG
ATGCCTTATTTCTTGGACTTCCTCAGCAAGCATGGGCAATCCCATCTTCT
CTTGTTCTGGCTTGAAGTCGAGGTATTTGAGCTTGCCGCCGGTGGAGGCC
CCTCGCTTGTAACGCAGGCAACGCGAATTTACGAGTCTTATCTGGGAGAA
GGAGCACCCAAGCGCATCGATGTCCCAGATGTCATGCTTACTTTCCTTGA
AGGCGAAATCACTTCCGGCGCGCCCAATATCAACGTATTCGCTGCAGTCC
ACGCTTTCGTCTTCCGTCGTCTTCACCAAACTTGGTATCCTGCGTTCCTT
CTATCGACAACCTATCGATCCCTTCTGGTGCATCTCAAAAATTCTTTCCG
TACGCCCCTGAAAGAAGTCCTCCTAGACGAAGTCCAGAGCCGCTACATCG
AAGCCTTCCTCTTGAACTCCACTTCCCCAACAGGCCCTTGTACCGTTGGA
AATGTGTATCTATGGAAAAAAATCCAACATGACCTGCGACCTCTAGGCGC
ACGTCTGTCCCGGGACCGACTGGTGGGCCCCGCAGGCGATGCCCGAAACG
CCAACGACCTCCGCACTTTCATCATGGACGCCAAGGCTGTGTACGAAGCC
TACATCCAGCCCTCCCCGCAGGTAGGGGTCTCAGGCGGACCGTCACTTAG
CAGTCGGTCATTCTCCGGGCAGGGCTACGAAGGGGGTGGTCGCCAACGAG
ACGCTCCGAGTGCGACCGCCCTTGGCCCCGAGTTGCGGTATTCCATTGCC
GAGTGTTTGGGCCGGTTGGCCAGCCAATCTCGGTATTATTCGGGCGTGGG
TACTGGAGGAATAGGACAGATTGACCGAAGCATTATTGGGGAACTAAATA
CTTACCTAATCGAGGCCCAACGGGTGATTCTTGCCTGGTTGGAAGCTGAG
GTATATCCCTCCTTCCTCGAATCCAATCTAGTCGGCATTTTGTCAGGAGA
AATTCAGAGCCAACGGTCAGCCCCTTTGCGGCGGAAAAAGCGCCTACGCA
CGCTCTTCAAATCCGTACGCTCCTTTCGGCACGTGTATGTCCCTCCCTGC
CCTCGCTCCGAAGGGCGTGGCCTCGTCTTGGTGAGCACGGAGGACGTATT
TAGGAAACCGGAGCCTTTGACGCATGAATTCGTGTGGGCGTTTGATGTCG
CCGTCTTTCCCGTGGACTTGACGGCAGGGAGGGCCTTGCGTGCGGCCGAC
CTTCGCACAGACGTGGGTAGGCGGGAGTCAGAGGTGGACGGGGAGGGCGG
GGAGAAGGAGGATGCTGGGGTCCGCTCCCCGGGTGGTGAGGAATCGAATG
GTGCTGTGGGAGGGGCGATCCTCTGCAGCAAAAACGAAGACGGAGACTCA
GGGTTTTTCCACCTCGATGAGCCGGTACCAAACTCCAAAGGGACCTCGCT
CGGGCAGGAAGAGGAGCAAGGCCACCGAAAGAAGGCCAAGCGGCCGCTGC
ATTTCAGCAGTGCGGTGCGTTCGTCTCAGGTTTTGGGGCTGCCGAAGCCG
AGTGTGTACGGATCCAATGACGTCGCAGGCGCAGATACGGCCACGGAAGA
CAAGGAAGACGTCGCAACTTCCCTGTGTGCGGCGATCGAAACACGGTTGG
TCCGTGAAATCCAGCGCCTCGCCTTTCCCTCCCTGTGCCTCATGCCTCTC
GAACGCTCCACTTTCGTCCTCTTTTCCCCAAAACTCGTCGTCCCCGAAGC
CACTCTCCACCACTTTGTGCTACCCATCTCCCGCAAAGACGTGGACCCTG
AGCTACGGAGGGACATAAGATCTGCGGACGGACGTGACTTGGCATCCTCC
CTTGGAAACCGAAGCCCTTCTCCTTTCGTGGCGAGCCCACGTGTCGCCGT
AAGGTCTCCTTCAGGGGAGGGGGAACTGGCACCTCCGGATCTGAAGGCTG
ATCAGTCTATTGACCTGTATGGAGCCTGTCTGATGGAATGGGCACCCGCC
GGCGCGGACGTGCTTTTGCCGCGGTGCGTCGTTCTGGTCAGCACCGAGCC
CCGCGTCGCCTCTTTGCGCCGTGCGGTCGTCCGGATGCGGGAGTCAATGG
GACAGCCGGGGGTAGGCGGGTCTCCCATCATGCCGGATACGCCCAAGAAG
ACACCCTGGCAGCTGGAAGATGAGCAGCTGAGGCAGCAGTCTGAGCGCGT
CCAGACCATGCTGGACACTAGCTTGTTCGCGCCGGCCCGCGGGGGGAAGA
GGAGCGAACGACCGACTGACTTTCAAAAGACGGACGCTGGGGATAAAACC
GACGCCGAGGAGTCTGCCGCCTACTGGTTGAGGGCCTGGAAGAAGACAGG
GATGGCTGCTTCGGCGTCGACGGTTTTGTTCTCGCCCAAGAGAGCGCCGA
CGACGAATTCCGGACTATCGGTCCCCGATCCTGCTGCTACCAGCAGCAGC
TCCTCTTCCTGCCCTCTACCTCCACCTTTGCTCACGTCCTTGCCCTTGCA
CGTGGATGCATCCTTTTTCCCTCTCATTCAGGCCCTCAGCCCGGAGATTT
TGCTCAAAGCCTTTACGGCAGTCCTGTTGGAGCGACCGATGGTAGTCAAA
TCCTCCTCGCGCACCCTCACCATGGTAGCCTGCGAAGGGCTTCGTCGTCT
CATCTACCCTTTCGCGTGGCTGTTGCCGTACAAACCTCTGCTACCTGTGG
GGGGGGTTTGCAGCTTCTGGGACGATGTGAAACGTAGTGCAGGAGGGAGG
AGCTGGTATGACTACGTCTTCGAAGAGGACGGGCTCGACGAGTCCCTGAT
GAGGATAGCTGGGAGAAGAAGCTATGCGGAACCGATGACGGCATCCTCGG
CGATGCGTCAAGTGCCCGGCTTTTTGGTCGGCATAGAAACATGCATTGTC
GACGCTGCGCTTACTGCCACGAAGATCGTCTCGCCGGCATACAGTGATGG
AGATGGGGACAGTGCGAACAGTAGCAGCGGCTGCCATGCCTGGGCTTGTG
CCACTTGTGACGTGCATGAAATGGGCGTGTTTTCCGGCATGGATGGCGTA
CCTTCCTTTGACGTGGATTCGCCCTTCAGCCCCGGCCATCCGTCCCCGCT
TTCGACCCGCTCGATGCCTTTATCCACACGCGGTCAAGGTGGTCACGGGC
TCAGTCCTTCTGGTGTCGCGACGGCAGGACATGCCGCCCGAAATACTAGC
ACGACCAAGTACGGCGAGCTTCCTCCATGTGTACGAGCCTCTACGCGAGA
ACTCCTTGCCAGTGCTTTTATCGTAGACTTGGACAATGACTGTGTGGAGG
GACCGCGGCGGGGGGATCCGGCGACCGCCACGCTTCCTGTATTGCCCGAA
GCAGCCGTTTGCACCTTGTTGACCTCAATTCAGCAGCTTGTGAATCCCAG
CATGGGATCCCCGACAGGAGCGGGTAATGGAGATGCCTTAGGCTATGGTT
ACCATGCAGTGCACGTTGCGCGATCGACCGACGCGAAGAAGAGCAATCAT
GAAAGCATGCTCCGAAATGGAAGTGCAGCGCCCAGTTCTGAGGAGACAAA
GTCAAAAGATAATGCAATGAAGAATGTGACAGGAAATGTTCAGCTGCATG
CAGCCTTCGTGACATTCTTCCGTCAGTTGCTCCTTGACCGGTACCGAGAG
TACACCTTGAGCTACTTGGAAGAGCAAATGGTGGCTTTCCACGCGGACAG
CTTTCTGGCTTCGCAACCTGAACCTACGCACGCATTCTGGACGGATATGT
TCCAAACTCGCCTTTTTGCGTATTTTTTACTGGTCGAACATCAGCGTGTG
GCAGCTTCCTTTCGCGAACCTGACCGAGAAACACCCCCGGATGGGGCAGT
GGAGACGATGGACGTCTGAAGGACACAGAAAGCGACACTTTTACAAATAG
GTCACGACCGTCTCCCAACAAAGCAAGTAAAAAAATTTAGATGAAATCAT
CAAGAAGAGTCCACCTGCTACAAATTTAATCAAACACGCACTTGAATATA
TGT back to topprotein sequence of rna1122 >rna1122-protein ID=rna1122-protein|Name=rna1122|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
MASRNKYFKDEATGESKESKSGGVAEKNPAKYFRAYRHETKVENALYRTS
QSVIGARPPTIATIVTETHKFPQPFSKSLGSLSYRNQSLNTTKSRSKIHR
SLDPQF back to topmRNA from alignment at CM002456.1:1243485..1244298+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1122 ID=rna1122|Name=rna1122|organism=Nannochloropsis gaditana|type=mRNA|length=814bp|location=Sequence derived from alignment at CM002456.1:1243485..1244298+ (Nannochloropsis gaditana)
AAGCCAAGGTTTTCCTTCCTTTATCAAAGGGTGAGAATGTTCTACACTCA
TACCTTCGTCGAAAAGACATGCTaaatttcttcttttgaaACAAAATTTA
GGCAAGCGACGAGATTGGCAAGGGCCTCGCACCCATTACTTCATCCCACA
CCGGCAGCCCTACCGATCCGCATGTcgttgcttcctcttctagCGAAATT
CTGAGTAATGTCAATACTATGGCAAGTAGGAACAAGTATTTCAAGGATGA
GGCAACAGGTGAAAGTAAAGAAAGTAAATCAGGAGGGGTGGCCGAAAAAA
ACCCGGCGAAATACTTTCGGGCCTACCGTCACGAGACCAAGGTTGAAAAT
GCACTCTATCGGACAAGTCAAAGCGTGATTGGTGCCCGTCCACCAACGAT
CGCAACAATAGTAACGGAAACACACAAATTTCCTCAGCCTTTCAGCAAGT
CTTTGGGATCATTATCGTACAGAAATCAGGTATGTATTTGGCGTGTGAAG
TGGGGCTGCGGCGCGGAAGGCCTCCAAAAACCTTGCACATTCCACATTGC
ACTTATAAAGATCTGTTTTGTTTTGTTTGAGGGTCCTGAGAGGTGTGCTC
ATCGTTTTTattctccatctccttccatATTTTTAGAGTCTCAACACGAC
TAAATCTCGCTCCAAGATCCATCGCAGTCTGGATCCTCAGTTCTAAATTT
CAATTACTGTGACAGATTCGTGATTGATTCTGAAATGGAAGGTCGTGGAA
CGTACTTTCTTATTTTCGTCGCTGCTCCGGATATTTATCTAGGGAGATAA
TTTACGTAATGGTG back to topCoding sequence (CDS) from alignment at CM002456.1:1243485..1244298+ >rna1122 ID=rna1122|Name=rna1122|organism=Nannochloropsis gaditana|type=CDS|length=642bp|location=Sequence derived from alignment at CM002456.1:1243485..1244298+ (Nannochloropsis gaditana)
ATGGCAAGTAGGAACAAGTATTTCAAGGATGAGGCAACAGGTGAAAGTAA
AGAAAGTAAATCAGGAGGGGTGGCCGAAAAAAACCCGGCGAAATACTTTC
GGGCCTACCGTCACGAGACCAAGGTTGAAAATGCACTCTATCGGACAAGT
CAAAGCGTGATTGGTGCCCGTCCACCAACGATCGCAACAATAGTAACGGA
AACACACAAATTTCCTCAGCCTTTCAGCAAGTCTTTGGGATCATTATCGT
ACAGAAATCAGAGTCTCAACACGACTAAATCTCGCTCCAAGATCCATCGC
AGTCTGGATCCTCAGTTCTAAATGGCAAGTAGGAACAAGTATTTCAAGGA
TGAGGCAACAGGTGAAAGTAAAGAAAGTAAATCAGGAGGGGTGGCCGAAA
AAAACCCGGCGAAATACTTTCGGGCCTACCGTCACGAGACCAAGGTTGAA
AATGCACTCTATCGGACAAGTCAAAGCGTGATTGGTGCCCGTCCACCAAC
GATCGCAACAATAGTAACGGAAACACACAAATTTCCTCAGCCTTTCAGCA
AGTCTTTGGGATCATTATCGTACAGAAATCAGAGTCTCAACACGACTAAA
TCTCGCTCCAAGATCCATCGCAGTCTGGATCCTCAGTTCTAA back to top
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