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Properties
| Property Name | Value |
|---|
| Product | adrenodoxin-like protein |
| Orig transcript id | gnl|cribi|Naga_100006g77.8604.mrna |
| Orig protein id | gnl|cribi|Naga_100006g77.8604 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1161850..1162868 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1090 ID=rna1090|Name=rna1090|organism=Nannochloropsis gaditana|type=mRNA|length=4681bp
CCGGGGGAGTTCTACATACCGTCCGTCCCACCGCGTGCGGGTAAATGCTC
GTCGACGGCTTGCTTGGTGCCGTCCCAGCAATCTTGGTTGTCTGAAAAAT
GCAATACCTGAGCAAGCAGGACTACGAGGATCATCCTCGTGGCGCAAAAT
TTGGCAAAGAAGTAGAGTGGTGCTAAGTCGAAGTTACCTTTCCGTTGCCC
CTCGCTCCGTCGCTCCCAGGAGTCTTGCATTAGGCAAAAAGGACTTTGCC
GCTCGCTACATTGGCCTCAATGCGCTGCAGCTGCTAAGTTCGCGGTCGAG
GCGCTGTGTACGGTGCATTTCATTGTGTGCCAACCGGCGAAATGACTCAA
GTTTGATTCGGGTCATCCTAAAACGTCACAATAACGATATATATTGGGAG
GAATGCCATGATCCTCGGGGCCCAGCATTTGACATTGCTTTATCCTCATG
CAACCCAGTTTCCTCTCAAAAATAGGGATCCATTAAGCTATTTTTGAGGC
GACACCATGTTCTTTGAAGGTGAGGCCAAACGACGGCCCAATGTGAGTTT
GCGGGGCAAAAGCCGAGAAGAGGAAAAAGCAGAGCTCCTCGTACGGGCTC
GGCGTGAGAGACAGGCTCGAGCCGCGGATAAAGAAAAACGCAACGCCGCA
CTTGCCATCCTTCGGTTCCATCGCTCACGGAAGATAGTGGCTGCGTTCAA
GGCAGAGCAGGTGGCAGAATTCGATAAACGCATGATGGACTTATGGAATT
TGCGAAAGCTCCTCCAGAAGGCTCAACGCCCTCTGCCGACCCCCACTAGT
CTGGTGGAGGGCTTGGTAGGCCAGCTCATTTCTTTCTACAGCCCCATCCG
GGAAGGTGACAATCAGCGCCTGCTGCGTTTGGCGTATCTGTTGCTGGATT
CCTGTGGGTCGACCAACGCGGCATGGAACTACAAGATATGGCGGCAATCG
CACCCAGCGTTATTTGAAGCAGAAGTAGTCAGGTTTACGCGCCTGTGTTT
GTACCGAATAGATGCCCTGCGGCGAAAGAGGGCTTGTGAGCAGGAGAAGG
ACACGGAAGGAATAGGCGCGACGGGGGCCGAGGAGGAGGAAGAAGTGTTG
TTGAAGCTTGTGGAAGAGCTCCTCGACCTGCCCGTGGGTGCCGGAGACAA
TCCGGCTTCGGAGGTGGCCGTCAGCTGGCGCATGCTCCTCCAGCTGACCG
TCGAAGGCGGAGAAGAAGGTGATTGCTGGGGGCACGTGGAAATGCCCCGG
ACGAAGAGGCGCAAGACCTGCCACGGCGACCAGTGTCGGCGAACTCCCTT
GCCCCGCCTCCTCCTCAACCCCTTCCTCGCGCGTCTGCAACGGCACCTGG
GACTCTCTGTCCTCCTCCGTCGGGAGCTCCTAGCCTTCAGCTCGTCAAAC
AGAGAAGCGAAGGGCTCTGGCTCGAAGGCTTTCCCGGCGGCTTTGAAGCT
CTTGTGGGCCCTGGCCTGTACGGCCGCGGGCCTTCCGCGAGGCTTTCCCG
GCGTATCGCCCCTTCCTCCGCCCATCCCTCCCTCCCTTCGAGACCTGCAA
CGTGCTTCCCGAAGTCAGGTGGCCCGCTCCCTTCTCTCCATCCCCAAGCT
CTTCACAGAGTCCAGCTTCTCCCCGTTGCTCGCCCCTTTGGGGCAGGGGA
AGGCATTAGGCTTGTGGGGCCTGCTCGACGGGTGGGACCGAGCGCAGCAG
CCAGAGCAAGAGCAGCTTCGGCGGTCGGTGGGGACGCCGACTGGGCGAGG
GGGAGAGGGACAGGGGACGGAGGACGTGGGGGAGCTGGCTGTGGTGCGGA
ACTTGCTGGATTTGACGCGTATGTTGCTACAGCGGGGAGGAGAGGAAGGG
GATCCCGGGGAGAGAGGAGGGGGCATGCCTGCCTTGGTCCGGGCGTTGGG
ATTCAGCGTGCGGCGAGTCCCGTTTGTGGGCGAGAAGGGGGGGGGGGACA
AAGACATCCTCGCAGAGGACGAGGCGCGGATGGCGGTGGACACCGAGGAC
CTTGAGGGGGTGGAGGGCGGAGATGGCGAGGGAGGGACGGGGAGTTGGCG
CGGGAAGGGGCTGGAGGAGGCGATCTGGAACGCCATGAGGGTCTCGCAGG
CGCGTACTGGGGCGCTGGGCTCGGAGGCCCTGGCCATGGCGACGGCGGCG
CGGGAGGCCTTGAAGAAATTGTGCGAGGGCCGGGAGTTGCCCCGGCTCTT
CGATAGGTTCCTGGAAGGGATGGAGAAAGCAGGGGAGGCAGGGAGGGAAG
CGAGGGAGCGAGACGTGGTGAACGTGTGCCGGCTCTGCAGTCACGTGCTC
GTCCATGCCGAGGACAGCCTCCCCACCTCCGTCACCCATGCCGGGGCCCA
CGCGGTAGGTGGGCCCCGACCCGAAGGCCTCTCCTCCAAGGTGCTAAACC
TGCTGGCCTATCACCAAGGCCGGGACGACGTGCCCTTTGTGCGTCGTCTC
TGGGGACAATTCCTCTTGCCCAAGGTCTTGGCCGCGGGGGGGGGGCGGAA
GGCGTTCGCTGCGGGCAACGAGGAAGGATTGCTCCCTGACTACTACCCCG
CTTTCCACCTCCTCTTCTCCGTGTATTCGCATCAACTCATGGCGCTCGAC
GACGAGGAGTTTTACCTGCGTCAGACTCCTCTTTCCCTTTCGCAAGTCCT
TGTTCTGGTAGATGCATTGAAAGGCCTCCTTTATCAGATGTACTGGGTCG
ACCCCAACCGCTTGCTCTTGGCATCTTCCTCTTCCCTGCTCCCGCCCTTG
GAGGCCCTGCAGCTCACGCGGGTGGCGACTGAGCTTTTCAATCAATTGTA
CCAGCGACACAGCCGCCGGCCGTTTCCTCCCGCTATTGCCGCAGAAGCTG
AGCGAGGCGTGGGCGATAGGGATGCCATGGAGGTCGATACCAGCACGACC
GTCCGGGGCTACAACAGGAGCAGGGCCGGTCTCACTGCACAGGGCGAATC
AGACCCTGCCCTTTGGCACTGGCCCGCTATTACCCAGCATGAGCTCGACC
AAGAGCTTTCCGCCGCGGAAAGCGTAGCCGAGCAGCCACCTCAACTTCCC
TATCCACAAAGCCACGCCCACGTGGAAAATTCAACCGGAGCCTCGTCGAT
CGAAACCCTCTTCGACACCTCCAAACGCCTCTACCCTGTCTTGACGCGGA
TTCCCCAAGTCCTCCCCTTTGCTCAGCGCGTGCAAGTCTTTCACAAGTTG
TTGGCGGCGGACAAGCGACAGGCACAGGACGAAGCTCAACTGTTCGGGCA
CCGGATCCGGATTCGCCGCGCCCACATTTACGAGGACGCCTTCAAAGCCT
TGAACCATCTTGGGCATGGTCTCCGGGGCCGTGTGCAGGTCACTTTTGTC
TCTGATTTGGGGACGGAAGAGGCTGGGATCGACGGAGGGGGCGTCTTTAA
GGAGTTCATGGACGCCTTGACCAAACGCGCCTTTGACCCTCAGTATGCCC
TCTTCCGCGTCACCCCTGACCATTTGCTCTACCCCAATCCTCTCTCGGGA
CTGGCGGTCGGACCGGATCATTTGCAACATTTTGCTTTTCTGGGTAAAGT
CTTGGCGAAAGCCTTGTACGAATCCATCTTGGTGGAGCCACAGTTCGCCA
TATTTTTCCTGCAGCGGCTGGGAGGGAAGCTGAACGAGACGGACGACTTG
TTCAGCCGCGACCCCGAGCTGTACCGGCATTTGATGTCCTTGAAAAGGCT
GGCACGGGAAGGAGAGGGGGTCGGCGCGGATGTGCGGGACTTGTCACTGA
ACTTTGAGGTCGTGGTAGAGGACGACGAGAAGCTTTTGCCACAGGAGGCT
GCGGCGGTTGAGTTAGTGCCGGGCGGGAAACACGTACCAGTGACCAACCA
GAATGTGTTTCGGTACATTCAGCTGGTCGCCAACCACAAACTGAACGTGG
AGATAAATACCCAAGCCCAAGCATTTTTGCGAGGCTTTCGGGATCTCATT
CCCATGCCCTGGCTCCGCATGTTTGGCGCGGAAGAGCTGCAAATCCTCTT
GACGGGCGAAAAGCGAGCGATCGACATAGAGAACCTGCGCGCACACACCC
GTTACTCGGGGGGCTACCACCCTTCACAGCCCATCATCCACTGGTTTTGG
GAAGCGCTTCGGTCCTACACGCCGGACGAACAGGCAGCATTTCTCATGTT
CGTGACCTCATGCTCGCGCCAGCCGCTCCTTGGATTTCAACACCTGAACC
CGCCCGTGTGCATCCAGCGTGTGCCCCTGACCACGGAAGGGGGGGAGCGG
CTGCCGTCTTCCGCCACTTGTATGAACCTTCTAAAGCTCCCTGCTTACCC
CACGCCAGAGATGCTGAGAGAGAAATTGCTCTACGCCATCACGGCGGGAG
CGGGTTTCGAACTTTCGTGAGCGGAGACCCAGGGTAGGAAGGGGGCGGTA
AACAGAAACTTTGCGAGGAGGATGGGGCGCGGGGCTAATTTGTGACCTAG
AAGATGTAGCTATGTACATTGACCACATGGAAATGCATGTGTGATAGCAT
TGTGCTCAAACTTGCACAGAAAATTAGGGGAGAAAGAGGCGCTGACATAA
AGAAGAGAAAAGGAAGCAGCTCTGTATTTGCGATTGTACTGCTTCCACGC
ACAATTGTCTTTAGTGATTAAGCACATTTGAGCCTCGTACAACAAGAAAC
ATTCAATATTGACACTTGCTCCCCGCCTTGT back to topprotein sequence of rna1090 >rna1090-protein ID=rna1090-protein|Name=rna1090|organism=Nannochloropsis gaditana|type=polypeptide|length=182bp
MLQLVANISSTGMLQSAVRHVTVARNSIGFRKTCSLPALIQIPRILFHAT
ARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVEL
EGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGC
QVELSQDMDGLKIKLPSATRNFYIDGHVPKPH back to topmRNA from alignment at CM002456.1:1161850..1162868- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1090 ID=rna1090|Name=rna1090|organism=Nannochloropsis gaditana|type=mRNA|length=1019bp|location=Sequence derived from alignment at CM002456.1:1161850..1162868- (Nannochloropsis gaditana)
CCACTGCCTCCTTCCATCTGATCCATTGCCATCGAGACGTGCAAAGACAA
CTGCGAAAATCACGCCCGCCGCACGAGCAAAGTTGAACAACGAGTCGATC
GTGCCGGAGGCAAATCAGAGCTGCCGCTGATTTTGTGAGGTTTAGGCGAG
GTCTTTGGCGGTGTCGAACGTGCAAAGTCCCCGCTCCTTTTTTGGGTCTC
TGTAGACCTACATTGATAATGAGCTTTGTCAAAGAGCCACAGCTGCCTTT
TGAGGTCCCAAACGTCTTGCCTACATGTCAAGCATGATTGGGGTATAGAG
GGATATATCGCAGAGATTTCTCCTTATGCTCCAACTCGTTGCCAATATAT
CGTCAACAGGGATGCTCCAGTCTGCTGTCAGACACGTGACTGTAGCCAGA
AATTCAATTGGATTTAGGAAGACTTGCTCGCTCCCTGCTTTGATACAGAT
ACCACGTATCCTTTTTCATGCGACTGCGCGCGTCGCACACGGCAGTGGCA
AAGATCTGAAAAATGCCCCGCGCATCAACTTGCACTGGATTGGAAAGAAA
GGAGAGGAATTCACCACGGACGGCATTGTCGGAGAAAGTATCCTGGAGGC
CGCACATCGGCATGAAGTGGAACTTGAAGGCGCGTGTGAAGGCGTGTGCG
CCTGCTCTACCTGCCACGTGATATTGGAAGAACCCGTGTTTGAGTCGTTG
GAGGACCCATCGGAGGAGGAGGAGGATATGCTCGACCAAGCTTTTGGCCT
GACGCCCACGTCTCGCCTGGGATGTCAAGTAGAACTGAGCCAGGACATGG
ATGGGTTAAAAATCAAACTTCCATCAGCGACGCGGAACTTCTACATAGAC
GGCCATGTGCCCAAACCCCATTAGAAGGGGTCAACTTCTCTCAGAGCTCG
AGGGAAATTTTGGTACGAACAAGGCGGGGAGCAAGTGTCAATATTGAATG
TTTCTTGTTGTACGAGGCTCAAATGTGCTTAATCACTAAAGACAATTGTG
CGTGGAAGCAGTACAATCG back to topCoding sequence (CDS) from alignment at CM002456.1:1161850..1162868- >rna1090 ID=rna1090|Name=rna1090|organism=Nannochloropsis gaditana|type=CDS|length=549bp|location=Sequence derived from alignment at CM002456.1:1161850..1162868- (Nannochloropsis gaditana)
ATGCTCCAACTCGTTGCCAATATATCGTCAACAGGGATGCTCCAGTCTGC
TGTCAGACACGTGACTGTAGCCAGAAATTCAATTGGATTTAGGAAGACTT
GCTCGCTCCCTGCTTTGATACAGATACCACGTATCCTTTTTCATGCGACT
GCGCGCGTCGCACACGGCAGTGGCAAAGATCTGAAAAATGCCCCGCGCAT
CAACTTGCACTGGATTGGAAAGAAAGGAGAGGAATTCACCACGGACGGCA
TTGTCGGAGAAAGTATCCTGGAGGCCGCACATCGGCATGAAGTGGAACTT
GAAGGCGCGTGTGAAGGCGTGTGCGCCTGCTCTACCTGCCACGTGATATT
GGAAGAACCCGTGTTTGAGTCGTTGGAGGACCCATCGGAGGAGGAGGAGG
ATATGCTCGACCAAGCTTTTGGCCTGACGCCCACGTCTCGCCTGGGATGT
CAAGTAGAACTGAGCCAGGACATGGATGGGTTAAAAATCAAACTTCCATC
AGCGACGCGGAACTTCTACATAGACGGCCATGTGCCCAAACCCCATTAG back to top
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