EWM29515.1, cds1089 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|585112086|gb|EWM29515.1| (adrenodoxin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 377.096 bits (967), Expect = 2.014e-132 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query: 1 MLQLVANISSTGMLQSAVRHVTVARNSIGFRKTCSLPALIQIPRILFHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
MLQLVANISSTGMLQSAVRHVTVARNSIGFRKTCSLPALIQIPRILFHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH
Sbjct: 1 MLQLVANISSTGMLQSAVRHVTVARNSIGFRKTCSLPALIQIPRILFHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|553183909|ref|XP_005853990.1| (hypothetical protein NGA_2031600, partial [Nannochloropsis gaditana CCMP526] >gi|422295070|gb|EKU22369.1| hypothetical protein NGA_2031600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 357.451 bits (916), Expect = 8.768e-125 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
Query: 11 TGMLQSAVRHVTVARNSIGFRKTCSLPALIQIPRILFHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
TGMLQSAVRHVTVARNSIGFRKTCSLPALIQIPRILFHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH
Sbjct: 1 TGMLQSAVRHVTVARNSIGFRKTCSLPALIQIPRILFHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 172
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|673050057|ref|XP_008878989.1| (hypothetical protein H310_13315 [Aphanomyces invadans] >gi|574465400|gb|ETV92438.1| hypothetical protein H310_13315 [Aphanomyces invadans]) HSP 1 Score: 167.162 bits (422), Expect = 8.050e-50 Identity = 79/139 (56.83%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 44 RILFHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
R LFHAT+ + HG N P + L + K G D +G SIL+ AH+++++LEGACE ACSTCHVI+E+ +F+ L +P EEEEDMLD AFGLT TSRLGCQV +S+DM+ I LP ATRNFY+DGHVPKPH
Sbjct: 20 RRLFHATSLLQHGGSHVAANGPTVPLKFRLKDGSIKVVDAAIGASILDVAHKYDIDLEGACESSLACSTCHVIIEDDLFDKLPEPCEEEEDMLDLAFGLTATSRLGCQVMVSKDMENSVITLPLATRNFYVDGHVPKPH 158
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|698801796|ref|XP_009833927.1| (hypothetical protein H257_09416 [Aphanomyces astaci] >gi|574110885|gb|ETV76382.1| hypothetical protein H257_09416 [Aphanomyces astaci]) HSP 1 Score: 164.851 bits (416), Expect = 7.541e-49 Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 44 RILFHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
R LFHAT + HG G N P + L + K G D +G SIL+ AH+++++LEGACE ACSTCHVI+EE +F+ L +PSEEEEDMLD AFGLT TSRLGCQV +S +M+ + LP ATRNFY+DGHVPKPH
Sbjct: 21 RRLFHATPSLQHG-GAAAANGPTVPLKFRLKDGSIKVVDAQIGTSILDVAHKYDIDLEGACESSLACSTCHVIIEEDLFDKLPEPSEEEEDMLDLAFGLTATSRLGCQVMVSPEMENSVVTLPLATRNFYVDGHVPKPH 158
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|1000779884|gb|KXN71099.1| (ferredoxin precursor [Conidiobolus coronatus NRRL 28638]) HSP 1 Score: 162.54 bits (410), Expect = 9.423e-48 Identity = 78/137 (56.93%), Postives = 100/137 (72.99%), Query Frame = 0
Query: 46 LFHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
LF T HGSGK I +++I +GE + G VG+SIL+ AH +E++LEGACE ACSTCHVIL + +F+SLE+P++EE DMLD AFGLT TSRLGCQVEL +DM+G+ +K+PSATRN +DG PKPH
Sbjct: 39 LFSTTNISLHGSGKP-PEGEGITINFITPEGETVSARGRVGQSILDVAHSNEIDLEGACEASLACSTCHVILTDEIFDSLEEPTDEENDMLDLAFGLTETSRLGCQVELREDMEGMTVKIPSATRNMAVDGFKPKPH 174
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|1210518026|dbj|GAX22957.1| (hypothetical protein FisN_15Hh148 [Fistulifera solaris]) HSP 1 Score: 161.77 bits (408), Expect = 1.054e-47 Identity = 73/128 (57.03%), Postives = 97/128 (75.78%), Query Frame = 0
Query: 55 HGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
HG K +AP I + ++ VGES+L+ AHR+E++LEGACEGVCACSTCH+I+ + +++ L DPSE+EEDMLD AFGLT TSRLGCQV +++DM+G + K+P+ATRNFY+DGH PKPH
Sbjct: 26 HGGPKVPNDAPTITVTFLQPDKTRKEVQARVGESLLQTAHRNEIDLEGACEGVCACSTCHLIMPQDLYDILPDPSEDEEDMLDMAFGLTDTSRLGCQVIVTKDMEGTEFKMPAATRNFYVDGHKPKPH 153
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|299115246|emb|CBN74086.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 159.073 bits (401), Expect = 4.112e-46 Identity = 75/135 (55.56%), Postives = 101/135 (74.81%), Query Frame = 0
Query: 49 ATARVAHGSGKD-LKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
+TAR HG ++ ++A + + W K G + TT G +++ AH+H ++LEGACEGVCACSTCHVI+ VF+ L + SE+EEDMLD AFGLT TSRLGCQV ++ +MDG+ +KLP+ATRNFY+DGHVP+PH
Sbjct: 66 STARACHGDHEEGFEHAQTVQITWENKDGLKKTT-AKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 199
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|303287909|ref|XP_003063243.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226455075|gb|EEH52379.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 155.221 bits (391), Expect = 1.728e-45 Identity = 74/129 (57.36%), Postives = 98/129 (75.97%), Query Frame = 0
Query: 55 HGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILE-EPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
HG GKD NA I++ +I K G E +G+S+LE AH++++ELEGACEG ACSTCHVI+E E V+++L +P ++E DMLD AFGLT TSRLGCQV ++++DGL++ LP ATRNF +DG VPKPH
Sbjct: 2 HGHGKDDPNAETIDVTFIEKDGTETKVKAPIGQSMLEVAHKNDIELEGACEGSLACSTCHVIIEDEKVYDALPEPDDDENDMLDLAFGLTETSRLGCQVIAAKEIDGLRLSLPRATRNFAVDGFVPKPH 130
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|1072227413|gb|OEU12152.1| (ferredoxin, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 153.68 bits (387), Expect = 5.357e-45 Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 0
Query: 81 TDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEE-PVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
D VGES+L+ A R+++ELEGACEGVCACSTCH+I +++SLE+PSE+EEDMLD AFGLT TSRLGCQV + MDG+ I++P ATRNFY+DGHVPKPH
Sbjct: 17 VDAYVGESLLQVAQRNDIELEGACEGVCACSTCHIIFSSYDLYDSLEEPSEDEEDMLDMAFGLTETSRLGCQVLVDSKMDGIDIEVPKATRNFYVDGHVPKPH 119
BLAST of EWM29515.1 vs. NCBI_GenBank
Match: gi|1134898931|gb|OMJ96076.1| (hypothetical protein SteCoe_460 [Stentor coeruleus]) HSP 1 Score: 152.91 bits (385), Expect = 1.345e-44 Identity = 65/125 (52.00%), Postives = 93/125 (74.40%), Query Frame = 0
Query: 58 GKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
G+ + ++ I+ W+ G E +G +GES+LE AHR+ ++LEGAC+G ACSTCHVIL E +++ +P+ +EEDMLD AFGLTPTSRLGCQ+++++DM +I+LP A+ N Y+DGH PKPH
Sbjct: 6 GRFMSSSKTISFFWVTHDGRETKVEGKIGESLLENAHRNSIDLEGACDGSLACSTCHVILSESLYDVQPEPTADEEDMLDLAFGLTPTSRLGCQIKITEDMSNTRIQLPKASVNMYVDGHKPKPH 130 The following BLAST results are available for this feature:
BLAST of EWM29515.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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