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Properties
| Property Name | Value |
|---|
| Product | unc-50 family protein |
| Orig transcript id | gnl|cribi|Naga_100006g85.8623.mrna |
| Orig protein id | gnl|cribi|Naga_100006g85.8623 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1143809..1145046 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1081 ID=rna1081|Name=rna1081|organism=Nannochloropsis gaditana|type=mRNA|length=1487bp
ACAGGGACAGCGTGATCATGGTGCTTGGGGAGGGCAAAAAAACTGATGGC
AAGTCGACCGATCCAGCAAAAGCGACCGAGGAGAAGCGCGTCCCCGCCCC
GCTGCGAGAGCGCAAAGGGAAGAAGCAGGAAGGGAAAGACTTGCGAACCC
CATCTAGCAACCTGAAACCTGCGCGTTCCCCCACGGAGGTCGATTGGAGT
TCTTTTCCCGAGGGAAGCTACACACGTTTTGGGCATGGTGGGGATTGGTG
GACCTTCTTGAAAGGCACACTTGCCATTTTAACAGTGTGGGCAACCTGGT
TAGGGGGGGGCACTTCACCCGTATGGATGGCTTGTTTATACATGCATGGG
TACCGAGTTGCATTCTGGATCCTGTTGGGCCCTTTACTTTATCCGCTTTT
CCTTCCTGTCCCAGCCTGGCCTGCATTTGTTCGTTTCGTGTTGGACATGG
CCGGTTATTTTGAGGGTGGGGCCGCCATGTACGTCGAGAATTCTTTCAAG
GGCAGGAATGTCAACGGTCCAATCATGCTGGCCATGCATCCCCATGGGAT
CATGCCGCACTCCTTCCTTTTGAACGGCGCAGGCCGGATTCATGCCCAAA
AACCCGAATTTTACCTCCCCCCCCACTACCAAGACATGTCCCTGAAATCG
ACGGGGGTGGCGGAACCGCTCCTCTTTCGCATCCCTTTGATATCTGCCTT
TCTGTACTTTTTTGGATGCGCGGAGCCGGCGTCGAAGGCGATGATGCACA
ACATCTTGGAGCGGCAGGTGCCTTTTGGCATTTTGGTGGGAGGCTCGGAG
GAGATTTTGCTGATGGAGTATCAACGAGAGAATGTCTACATTTTGGAGCG
AAAAGGCTTCATTAAATACGCGTTACAGCACGGCTATACTATCGCCCTGG
GGTATTTGTTCGGAGAGAGCAACCTGTACCACACCATCACCTGGGGCCGG
AAGCTCCGGCTTGCCCTTTTCAAGCGCTTCAAGATCCCAATCTTCTTCGC
CCGGGGACGCTGGTTTTTCCCCCTACTGCCCGAACGGGCCACCCCCCTTA
ACGCCGTGGTCGGAAACCCCATCGACCTGCCTCGGATCGCCGACCCGACC
CAGGAGGACATAGACAAATACCACGCGATCTATATCGAGAAGCTCACGGA
CTTATTTGAGCGGAATAAGGCTGCCTTTGGATACCCGGACCGGGAGCTGC
ATCTGTTTTGAAGGGGGGGGGGCACCTCCTTGGGGCGGCAGACGGGAAAA
GACTACGAAGGGGCAGTAGTCGGCAGGCATGCCGTGTCAGTGACCGGACA
CTTCCAGGGTGGTAGTTGTTGTTTGGGTGATTGGTCAAGGAAGGGGGGAA
GGAGGGGCCAGGTCTGGATGGGTTTGGAAGTAAAGGGGGTGTACAGTGTG
GGAGAGGCAACGGCGATGAATGCCTGATGGGCGACAAACCAAACAGACAA
AAAGTAACGATAGACAAGCAAGTGCGGATTTGTCACG back to topprotein sequence of rna1081 >rna1081-protein ID=rna1081-protein|Name=rna1081|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
MRSYQVGGLSTPHYTGSGHYRRHSSSGGGGGGSSGLLEYLRRIVDPNQMD
FDAAFEDILMLCSSHPQRMYKMASYRKHTKNHWARDDPALAVIQIAFLLV
SSSAYALAFHVRGGPVHYLFLALRAILFDWLLVGLVVATVCRSVANRYLL
ELRSHSVEQEVEWRYAFDIHCNAFLPFFLLTSVLHYFLLPLLLRPSLMAL
IVSNAIFGAAFAVYFYVTHLGYRALPFLHRTEVFLYPSILAVLLFFLFLV
LGMLGEPYRIQATRTMARLYYR back to topmRNA from alignment at CM002456.1:1143809..1145046- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1081 ID=rna1081|Name=rna1081|organism=Nannochloropsis gaditana|type=mRNA|length=1238bp|location=Sequence derived from alignment at CM002456.1:1143809..1145046- (Nannochloropsis gaditana)
GCGACGGTTGCTCGTAGACTGCCGGTGCACTTATCGAGGCTGGCATGCTC
GTCATCTTACGGTCTCCTGGTGTCGTGCAACCTCCCGTTTTCTTTTCTGT
AACTTCACTTTCCCTCCACTACAGCAGACACGGACTCCCTCGGAGACCTC
CCCAGCTCCCCCACCATCGCGTGTATATTTGATACAAGCTTGGATCTACT
GACAGACTCGACAGCATTGCACAACTTGCGTGGACGCAGGCTAGACACAC
ATGCGGTCTTACCAAGTCGGTGGGCTCAGTACGCCGCACTACACAGGATC
AGGACACTACCGTCGACACAGTAGCAGCGGAGGCGGGGGAGGAGGGAGCA
GCGGCTTGCTGGAGTATTTGCGGAGGATTGTTGACCCCAACCAGATGGAC
TTCGACGCGGCGTTTGAAGACATCCTGATGCTCTGCTCTTCTCACCCTCA
GCGAATGTACAAAATGGCTTCCTACAGAAAACACACTAAAAATCACTGGG
CGAGGGATGACCCGGCTTTGGCCGTCATACAGATCGCCTTCTTGCTTGTT
TCTTCTTCAGCCTACGCCCTAGCCTTCCACGTGCGGGGAGGTCCAGTTCA
TTACCTCTTTTTGGCTCTGCGTGCCATTCTTTTCGACTGGCTCTTGGTAG
GCTTGGTCGTGGCGACAGTGTGCCGGTCAGTGGCAAACCGGTACCTCTTA
GAGCTCCGGTCGCACAGCGTCGAACAGGAAGTGGAGTGGCGCTACGCTTT
CGACATCCACTGCAACGCGTTTTTGCCTTTCTTCCTCCTCACCTCCGTCC
TCCATTATTTCCTCCTTCCCCTCCTCCTCCGCCCCTCCCTCATGGCTTTG
ATCGTCTCCAACGCCATCTTCGGGGCTGCCTTTGCTGTGTATTTCTACGT
CACACACCTGGGCTACCGCGCCCTGCCTTTCCTGCACCGGACCGAGGTGT
TCCTCTACCCGTCCATCCTGGCTGTGCTCCTCTTCTTCCTGTTCCTAGTC
CTAGGCATGCTCGGGGAGCCCTACCGGATCCAAGCGACGCGGACCATGGC
CAGGCTCTACTACCGATGAGGCGGCTTCAGCCGCGTAGAGGTAGCATGTA
GGAAGAAAATAGCGGAGTAAAGCAGTGCCTCCACCGAGACGCGGCCCGCA
AGGACAGAGAACAAAGTAATGTTGGATAGGATGAGAACTTTCCCCCCATG
GCAAAGAGGATCTGGAGGAGGATCAGGCGATGCTAGCA back to topCoding sequence (CDS) from alignment at CM002456.1:1143809..1145046- >rna1081 ID=rna1081|Name=rna1081|organism=Nannochloropsis gaditana|type=CDS|length=819bp|location=Sequence derived from alignment at CM002456.1:1143809..1145046- (Nannochloropsis gaditana)
ATGCGGTCTTACCAAGTCGGTGGGCTCAGTACGCCGCACTACACAGGATC
AGGACACTACCGTCGACACAGTAGCAGCGGAGGCGGGGGAGGAGGGAGCA
GCGGCTTGCTGGAGTATTTGCGGAGGATTGTTGACCCCAACCAGATGGAC
TTCGACGCGGCGTTTGAAGACATCCTGATGCTCTGCTCTTCTCACCCTCA
GCGAATGTACAAAATGGCTTCCTACAGAAAACACACTAAAAATCACTGGG
CGAGGGATGACCCGGCTTTGGCCGTCATACAGATCGCCTTCTTGCTTGTT
TCTTCTTCAGCCTACGCCCTAGCCTTCCACGTGCGGGGAGGTCCAGTTCA
TTACCTCTTTTTGGCTCTGCGTGCCATTCTTTTCGACTGGCTCTTGGTAG
GCTTGGTCGTGGCGACAGTGTGCCGGTCAGTGGCAAACCGGTACCTCTTA
GAGCTCCGGTCGCACAGCGTCGAACAGGAAGTGGAGTGGCGCTACGCTTT
CGACATCCACTGCAACGCGTTTTTGCCTTTCTTCCTCCTCACCTCCGTCC
TCCATTATTTCCTCCTTCCCCTCCTCCTCCGCCCCTCCCTCATGGCTTTG
ATCGTCTCCAACGCCATCTTCGGGGCTGCCTTTGCTGTGTATTTCTACGT
CACACACCTGGGCTACCGCGCCCTGCCTTTCCTGCACCGGACCGAGGTGT
TCCTCTACCCGTCCATCCTGGCTGTGCTCCTCTTCTTCCTGTTCCTAGTC
CTAGGCATGCTCGGGGAGCCCTACCGGATCCAAGCGACGCGGACCATGGC
CAGGCTCTACTACCGATGA back to top
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