|
|
Properties
| Property Name | Value |
|---|
| Product | metal-dependent phosphohydrolase |
| Orig transcript id | gnl|cribi|Naga_100006g100.8602.mrna |
| Orig protein id | gnl|cribi|Naga_100006g100.8602 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1112115..1113215 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1068 ID=rna1068|Name=rna1068|organism=Nannochloropsis gaditana|type=mRNA|length=5526bp
TGCCAAAGGATATCAATTATGACCGAGCCTTACTCTTTTGCATCTTCCTA
TCTGGCAACTACTCCATCTTTAAGACAGGTGAGCGATTTGTACGTTTCAC
TGCGGTGCATGCCCCGGCGCCTGTGAGGTACTCCCGCTCAGGTTCTCGCG
TCCCGAGGAGCTCACTCCCAGAGAGCTCAACTACTCCTTTCTCGCTCCCC
ACGATCGTATCGGGAGCTTACCTCGTAGACTACGATGAGGAAACTTCGAC
TTTAGTGTCGACAAGCTACGAGTGACCACGGATATAGGAGGCGTTGCATT
TCGGGGCAGCCTTCATAATGGACGAAATCCTTTACAAGCAATTACATGCC
AGCATAAACCATATTATGGAAAATCCTGCGAAGCTGCCTGAGACGGGCAA
GGCCACTGGAGGTGGCGATATAGAACGAGGGTATCTGCATCAATGCGTTG
CTCAATTGCAACCTTTGCCAGACGATGACAGCAAGCCCCCTTCCCCCGCA
TCAAAGCTACGAGAGCCGACACCTCCGTCTACGTCTATTACCCATCCCGC
TCCCGCTGCCCCCGTCCCCGCGTCCTCGTCCCCTGTCTGCCCCATTTTCC
GACCACCCTCTGCTCGAGGGTCCACGTCCATGGACGAAATTCATTTCCAA
GATACTCTTGCGAAAGGTCCCCCTCACGACGCTGAAAAGGTGCGGCAAAT
GCTGGCTCGCTTGGATACTGGTCATCTGGTCGCGCATCTGGCCGATGGCG
ACAGTGACGTCAGCGAGGGGAGTGAGGACAGTGACGCGGGAGTTCTTCAT
GATAGACAGACGGCCGGAAGAAGACCTTGTGATGCCGATTACGATCCCAG
GGCGGATGAGGGAGCGAAAGAGGAAGAGGGGGAGGAAGAGGAGGAAGGGG
GGAAGGAAATCGACGACGGGCGAATGGAGGAGGAGGTGATGCATGCGGAG
AGGCGAATCACATTTTCTGATGCCACTTTATGTGCAGCATTTGATCCTCC
TACGAAGGAGGGGGCTAACGAGACAGCTTTGGATGCTCACTCTCCTGAGG
CGGCAGTTTCTTCCATGAAGCAGGCGAATCTGGCAACTTCTCAGGGTGTT
CATCCCCCAGCAGGGGACGAGACGCGCCTCAGGACACTCGACCTCGCTTC
CGACGTCCTTAATGAGACTTTGATGGCTCTGGAGAGTGATTCAGAAGACG
ACGTGGCAGGAATGGAAGCTGAAGATACCTTAGCTTTTTCGGTGGCGGGA
GTCGAGGATCAGGGGCGCGAAGACGATGTGCTCCACATGTCAACCAGGGC
AACGGCCTCCGGGACACAAAGGACTGAGCTGTGCCTCCACGTGGAAAGTG
ACGACGAGGAGGACGACGGCCTTGAGGCTGCCCGCGACCACGCAGAGGGA
GGGGCGGGGAAGGGCGGGGAAAGGCAAGGGAGCACGGAGGACGCAAGCGG
CTCGGGGCAGCAGGAGTGGGACGATTATTTCATCACATCCTCGGGAAAGG
ATGCAACTCAGGTGCCGCTCCCCCCCTCCCCCCCGCTCTTGCCGCCTCCG
CTGCCCCCAGATGAAGGACCTTTTCTGGTGTCAGGGTTAAAGATGCCGGG
AGACATTCATGAGGCCGACATTGGTCGTCGATGCCTGTCGCGCGCACCGG
CATACCCGCCTCCACTGACCGTCGTGGCCCGCGTCCGCGCCTATCTGACC
CCTTCCAGCCCATCGCATGTGTCGACGCCAGCGTTTCGCGGGTCGGCCAT
TCCGCACGCCCCCACCCCCTCACAGCCTCAATCTTCGAACGCATCGTACC
CCCTTTTGACGGTGGTAAACGAGCATCGCCTTGTCCTGGTCAATCCGGAG
GTTTTTGAAAACGCCCGTCCCGACGCAGTGCTGGCTTTGGTGGCGGCCCT
TAACCGGGCGTCGGCCGACGGGCGAAGGGACAGTCTGGAATGGGCTCGCG
CCTTCGAGCTGGACCGGGCGTATTGGTCAGGCAACTCCGAGGACAATCAC
AGCGTGGACCAAGCCGCCCTCTACTCCGACCTCGGTCGCGCCATGGAGCA
CGAGGTCCTGGAACTAGGCATCAACGTCGTGTGCTTTGCCTTTGGCGCGA
CTAAAAGTGGCAAAACCTACACTTTGTTCGGCCCGGAAGAGGCACTCTTT
CAGGATCGCACTCTGCAGACGCATCCGGACTTAGGGTTGGCTCCTAGAAT
CTTGGCAAAGATGCTGTCCGAGCAAAAAGCTAACGCTGCTGGCTTCTCGT
TAAGCATATCGGCTCTTGAAATATCCGTCGTAGGGGGCTTGCAAGATCTG
TTGCTCGACCTTAACGCCCCCACTATTGGTCCTTTGCGTATCAGAGAGCA
TCCGGACGACGGTCCATACGTCGAACATTTGACCATCGAGGCTATTCCGA
CAGTGGCACGGCTGCAGCAAGTCCTTGTGGCCTTGACATCCTCACGACGA
CGCGCAGGAGGCAGTCCGGGTAGTCACATGCTGTTGACGGCATATATTTA
CAGATTTGCAGAAAGCGATGCACTAATTAGCAAAACACAGATGCTTTTTG
TGGAACTTGCCAGCTCACTATCAGTCATGAACGAAAACAATGCTGAAAAT
GCTCGGCTCGCCCCCTCCAAAACCTCATCTTTTGTTTCATCGTCCCCGTC
CTCACCGAGACGACGCTATACCAGCAGCCTTAGCATCGACGGCAAATCTC
GTCAGCCCAACACAATTCAGCAATCCCTGACCGCCCTTGGTACCATGCTC
AAGCACTTAGGGAAAGGCGAAGATGTGGCTTTCTTATCACGAGCCTCGGC
CATCACCTGGTTGACGCGAGGTGCTTTGGCTGACCCCACAGGAGGGCACG
CCTACTTGTTGCTGTGTTTGGACCCCACGCCGGGTGGATATCACGACGCT
TTGCATGCGCTACACTTTGGGGAGCCTTTATGTGTACGACGGCGGAGTAA
GCATGACAAAACAAGGCGACCAGACACGTCAATTTATTCAAAGGTGGATC
TGGGCACCCCTGTGCGTGACTGCGACATACAGGACTGGTCGATTGCACAA
GAAGATTTTGGCGGATTGGTTCAGCGCTTGAGTGGAGGTCGGAAAGAAAA
CATGCGACACGTACTGAAAGAAACTGTCAGCGATCCTAAGCAACGCTTGG
AAAGATTGAAGGAATCCATGGGGAGTACAATGGCTGCGGACCTTGCTGCC
CAAGTACCCCTCGACAGTGAGGACGACGAAGAGGACGGCCAAGAAGGGCA
TGCATCGCAAGTAGAAACGTACGATACTTACGCGACCGAGCCACTTTGTG
CTCATCGATCGGGCACGGAGCCTGAGGAAACGAACCCTAGACGACCACAC
AGTGCCACAGATGGCCAAGCTAATACGCTTAGTCCACTGCCGCCGATTCC
CGCCCCAGGGATCGCAGAGCCCTCGAACAAGGAGGCTATTGCCCTTAAAA
CTAGGCTTACGGAGCTTCAAATTCAGCTTCAATCTATGCGTGTGGACCGT
GATGTGGCCCAATCCGATTCGCGACTCGCGCAAGAAGAGCTGCAACGCTT
CAAGCGCCAGGAGCTCACTGCCATGTCACAAAGGATCCATGAATTGGAGA
ATGCGCTCACAACGCTTCGACACGAGTATCAGGAACTGGAGCTCTCCAAT
CGACAATTAGAGAACGATCGGGGCTACCTCAGACAGCTTCTGGACGAGAC
CAAAGCGTCGCACGCGCAAGACCTTCAGCGCCTTGAAACCCGCTTGGAGC
TATTGCAGAAGGAGAAAAATGAATGGGAATTGAGGAATCCGCATTTACGC
AACCTGGAGTATTATGACCAGCTGCAGCAACAACTCTCGAAGGCCGAACA
TCATGGGCGGCAAGTGGCACAGGAGCTTCAAGAAAGCACTCTACAGCTTG
ACAAAGCCAAATTTGATGCTGCGGAGAACATGCGTAAAAATACTGCACTC
CAGGAGGAAATCAATTCATTGCGACTGAAATTTCAGCAGCAGCAGTCGGC
ATCTGCTAATGTGGAGGCTTTGCAACAACAGCATCAACAGCAGCGCTTCG
AGCTTATGGACCAACTCCGTGTCAAGGACGCCGCACTGTCAGAGCTACGC
CGAGATTCTTGCCGTATCGCCCGTTCATTGCATGACAGGGTCCTTACGCT
TGAGCGCCTTGCTGCGCATGCTGATGGATGGGCTTTGAGAGACGGCTTGC
GCAGTGAAACCTCTGCACTGGGTGCAGAATTGCGCCGATGGATCGAAAAA
TCGGAGAGTTGTGGAGGAAATGCTAGCTTTGCCTCTCCACGTCACGAGTC
CTTTTACGCGTCACCAACATCTTTTGCTCGCTACGACCATGGAGAAATCC
CTAACTTGCAGGGCCGGTCCCCGATATCCGTCGTGGACAGTCGTTTGTCA
GGCGTAAATGAGTGCTTGCGACAGGAAAATACAGAGCTAAAAGAAAAATT
GCGGACTTTGGAATCGCGTGATGCCACCAAGTCTCTGGTGGAGACGTTAC
TCTCGGGCATTAACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
TATCATGGAGGAAACGTCACTGCCGAGACAGTGGCGGTGTGCAATGCTGA
ATGTGCCAGCGAGGATGAGAATTCAATTTCTACCGTCCACCACTACCAAA
ACACCTCGAGCTATGGCAGTCGCGGTGAAAATCGAAGCAAACATAATTGT
TGCGATGAGGAGGACGGGCAAGAGAGCGAATGTTTGGGAGACATACCAGA
CCTCTCCCACCAGCTGCAGATGGAGGAGGAACTCGCATGTGCCCGTCAAG
AGGCATTACGTCTGCAGCACCAGAACCGGGCATTACTAGGAGAATTGGAA
GACCTTGACAAGCTCCTTATAGAAGCAGAGTCGGATGGCATTAACTTGTT
GAGTAGCGGGAGTAAAAGTGCTTCAAAGTCAAAGTCCTCCCCATCGAAGA
AGGAGCAGAAACAGGGCTCGACCAAGCACACCACAAAAGGAGTCGCTAAT
ATCGAATCAGTTGTAAAAGAACAAGTGAACAAGGCATTAGCTGGGCTTGC
CATCAATGGCACATCTCATCCCATAAACCCAGCACCATTGGCTCAGGCGC
CCAAGATGAAGCAGCAGGACAAGACTACTAAGCATTTTTTGCAACTTCTC
GAAAAAAAACGTCGCAATCAGCAACGAACCGGTATTCCTTTCACTTCCGC
GCCAGCCGCCAAGCTTCCTACTCCTTCTTTTCGCGGTGGCTTTGCCGCCC
CTCGTGAACGCGAGACGCGCAAGGGGAAGACTGAGTGGGTTAGAGAAAGC
AAATTTATCGAGGACTGGATAGGCTCTTTGCGGAGTCCTCCTGCCCCGTC
GGCAGGTAATTTTCCCAAAAATTGAAAAGGGGGACCCATTTTTCATTCAT
GATGTATAAGGAATGTGAGACTTAATATTATCGTGAGAGTACATTTGTTC
ATGTGCTTCAAGGTGGCACATACGATAACGTGGATAATAAGTAAATAAAA
AAATAACATCCTGGTGCTTTGCCGTA back to topprotein sequence of rna1068 >rna1068-protein ID=rna1068-protein|Name=rna1068|organism=Nannochloropsis gaditana|type=polypeptide|length=237bp
MWGGSCCIFFFSLFVSFAATRSFLFGASSSPTGAPHRVVASDMSSQLATN
VSPPSASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSF
LITDPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIR
SIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYER
SQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK back to topmRNA from alignment at CM002456.1:1112115..1113215+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1068 ID=rna1068|Name=rna1068|organism=Nannochloropsis gaditana|type=mRNA|length=1101bp|location=Sequence derived from alignment at CM002456.1:1112115..1113215+ (Nannochloropsis gaditana)
GAGTAATTACATGAATTATTGACAATTAAAAATCATGACCAAGGTTCTGA
TTTCCATCGCATTTTAGGACGTGTATGTGGGGCGGCTCCTGctgcatttt
tttcttctcgcttTTCGTATCATTCGCAGCGACCCGCAGCTTCCTTTTCG
GTGCATCTTCGAGTCCTACGGGGGCTCCGCATCGCGTCGTGGCAAGTGAT
ATGTCAAGTCAATTAGCAACAAACgtctctccaccctctgcTTCTCAGGC
ATTGGATTTTTTGCGGGTGGTGGGTAAATTAAAAACCCTCAAGCGCACAG
GATGGGTCAACAACAAGGTTGCACTGCCCGAGTCGGTGGCAGATCACATG
TACCGGATGGCCATGTGTTCATTCCTAATCACAGACCCGGCTTTAGATCG
GACGCGGCTCATGAAGCTGGCAGTAGTGCATGATCTTGCGGAGGCCTTGG
TAGGCGATATCGTTCCCCACGACGAGCGGTACACCAAGGAGCTGAAAAGG
ACTTTGGAAGAGGTACGAAATTACACTTCAAACGTGTGTAATTACTTTAT
TCACATATTTGACCATCGTACTAGGATGTATTGCTGGGAACCTCCGGTGA
AGAGGGATATTTACATCAATGCCATAAATCGTCCTATCTTACCGACGCCA
TCGCTTATCTGACAGGATGCAATCAGAAGCATCGCAGGAGACCTCGGTCA
TGAGGGCATCAGCGCAGAAATTATGTCCCTTTGGCTTGAATACGAAGACC
AATCGACCCCCGAAGCACGCGTTGTCAAAGACTTCGATAAgtaagaggaa
ggtggatgAAGTGCGCTTAAGTGGGAGGACATGATCTAATAAAGCAATGA
TTCAGTGACTTTCATTTTAAACCGCGATTTGTTCAATTCACTTCTACAAT
AGGTTTGAGATGATACTGCAAGCAGACGAATACGAACGGAGTCAGCCCGG
GCAAAACTTAGAAGACTTCTTCCAAAGTACAGCGAACGCTTTCCAGCACC
CTCAGGTGAGAGAGTGGGACGCAGAATTAAGAAAACAGCGGGATGCAAAA
TAACCTGACAGCGAAAAACGATAAAGTAAAAACAACGCTTTTTGTAATCG
A back to topCoding sequence (CDS) from alignment at CM002456.1:1112115..1113215+ >rna1068 ID=rna1068|Name=rna1068|organism=Nannochloropsis gaditana|type=CDS|length=2142bp|location=Sequence derived from alignment at CM002456.1:1112115..1113215+ (Nannochloropsis gaditana)
ATGTGGGGCGGCTCCTGctgcatttttttcttctcgcttTTCGTATCATT
CGCAGCGACCCGCAGCTTCCTTTTCGGTGCATCTTCGAGTCCTACGGGGG
CTCCGCATCGCGTCGTGGCAAGTGATATGTCAAGTCAATTAGCAACAAAC
gtctctccaccctctgcTTCTCAGGCATTGGATTTTTTGCGGGTGGTGGG
TAAATTAAAAACCCTCAAGCGCACAGGATGGGTCAACAACAAGGTTGCAC
TGCCCGAGTCGGTGGCAGATCACATGTACCGGATGGCCATGTGTTCATTC
CTAATCACAGACCCGGCTTTAGATCGGACGCGGCTCATGAAGCTGGCAGT
AGTGCATGATCTTGCGGAGGCCTTGGTAGGCGATATCGTTCCCCACGACG
AGCGGTACACCAAGGAGCTGAAAAGGACTTTGGAAGAGGATGCAATCAGA
AGCATCGCAGGAGACCTCGGTCATGAGGGCATCAGCGCAGAAATTATGTC
CCTTTGGCTTGAATACGAAGACCAATCGACCCCCGAAGCACGCGTTGTCA
AAGACTTCGATAAGTTTGAGATGATACTGCAAGCAGACGAATACGAACGG
AGTCAGCCCGGGCAAAACTTAGAAGACTTCTTCCAAAGTACAGCGAACGC
TTTCCAGCACCCTCAGGTGAGAGAGTGGGACGCAGAATTAAGAAAACAGC
GGGATGCAAAATAAATGTGGGGCGGCTCCTGctgcatttttttcttctcg
cttTTCGTATCATTCGCAGCGACCCGCAGCTTCCTTTTCGGTGCATCTTC
GAGTCCTACGGGGGCTCCGCATCGCGTCGTGGCAAGTGATATGTCAAGTC
AATTAGCAACAAACgtctctccaccctctgcTTCTCAGGCATTGGATTTT
TTGCGGGTGGTGGGTAAATTAAAAACCCTCAAGCGCACAGGATGGGTCAA
CAACAAGGTTGCACTGCCCGAGTCGGTGGCAGATCACATGTACCGGATGG
CCATGTGTTCATTCCTAATCACAGACCCGGCTTTAGATCGGACGCGGCTC
ATGAAGCTGGCAGTAGTGCATGATCTTGCGGAGGCCTTGGTAGGCGATAT
CGTTCCCCACGACGAGCGGTACACCAAGGAGCTGAAAAGGACTTTGGAAG
AGGATGCAATCAGAAGCATCGCAGGAGACCTCGGTCATGAGGGCATCAGC
GCAGAAATTATGTCCCTTTGGCTTGAATACGAAGACCAATCGACCCCCGA
AGCACGCGTTGTCAAAGACTTCGATAAGTTTGAGATGATACTGCAAGCAG
ACGAATACGAACGGAGTCAGCCCGGGCAAAACTTAGAAGACTTCTTCCAA
AGTACAGCGAACGCTTTCCAGCACCCTCAGGTGAGAGAGTGGGACGCAGA
ATTAAGAAAACAGCGGGATGCAAAATAAATGTGGGGCGGCTCCTGctgca
tttttttcttctcgcttTTCGTATCATTCGCAGCGACCCGCAGCTTCCTT
TTCGGTGCATCTTCGAGTCCTACGGGGGCTCCGCATCGCGTCGTGGCAAG
TGATATGTCAAGTCAATTAGCAACAAACgtctctccaccctctgcTTCTC
AGGCATTGGATTTTTTGCGGGTGGTGGGTAAATTAAAAACCCTCAAGCGC
ACAGGATGGGTCAACAACAAGGTTGCACTGCCCGAGTCGGTGGCAGATCA
CATGTACCGGATGGCCATGTGTTCATTCCTAATCACAGACCCGGCTTTAG
ATCGGACGCGGCTCATGAAGCTGGCAGTAGTGCATGATCTTGCGGAGGCC
TTGGTAGGCGATATCGTTCCCCACGACGAGCGGTACACCAAGGAGCTGAA
AAGGACTTTGGAAGAGGATGCAATCAGAAGCATCGCAGGAGACCTCGGTC
ATGAGGGCATCAGCGCAGAAATTATGTCCCTTTGGCTTGAATACGAAGAC
CAATCGACCCCCGAAGCACGCGTTGTCAAAGACTTCGATAAGTTTGAGAT
GATACTGCAAGCAGACGAATACGAACGGAGTCAGCCCGGGCAAAACTTAG
AAGACTTCTTCCAAAGTACAGCGAACGCTTTCCAGCACCCTCAGGTGAGA
GAGTGGGACGCAGAATTAAGAAAACAGCGGGATGCAAAATAA back to top
|