EWM29513.1, cds1067 (CDS) Nannochloropsis gaditana

Overview
NameEWM29513.1
Unique Namecds1067
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1112189..1112626 +
Alignment locationCM002456.1:1112780..1112904 +
Alignment locationCM002456.1:1113017..1113167 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29513.1
Productmetal-dependent phosphohydrolase
Orig transcript idgnl|cribi|Naga_100006g100.8602.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1112189..1112626 +
CM002456.1supercontigCM002456.1:1112780..1112904 +
CM002456.1supercontigCM002456.1:1113017..1113167 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR006674HD_domain
IPR003607HD/PDEase_dom
Homology
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|585112084|gb|EWM29513.1| (metal-dependent phosphohydrolase [Nannochloropsis gaditana])

HSP 1 Score: 493.426 bits (1269), Expect = 1.049e-176
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query:    1 MWGGSCCIFFFSLFVSFAATRSFLFGASSSPTGAPHRVVASDMSSQLATNVSPPSASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLITDPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237
            MWGGSCCIFFFSLFVSFAATRSFLFGASSSPTGAPHRVVASDMSSQLATNVSPPSASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLITDPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK
Sbjct:    1 MWGGSCCIFFFSLFVSFAATRSFLFGASSSPTGAPHRVVASDMSSQLATNVSPPSASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLITDPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237          
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|298710206|emb|CBJ26281.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 232.646 bits (592), Expect = 1.239e-73
Identity = 117/188 (62.23%), Postives = 142/188 (75.53%), Query Frame = 0
Query:   50 NVSPPSASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLITDPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237
            NV P SA   L F+RVVGKLK LKRTGWV+  VA PESV+DHMYRMAMCSFLITDP LDR+R+MKLA+VHDLAEAL GDI P  ++ +KE KR LEE+ +  I   +G + I+ EI  LW EYED ++ EARVVKD DK EMI+QAD+YE+ Q G +L +FF+ST   F  PQV+ WD ELR+QR A+
Sbjct:   11 NVLPASA---LSFMRVVGKLKELKRTGWVHRGVAKPESVSDHMYRMAMCSFLITDPTLDRSRIMKLAMVHDLAEALAGDIAPF-QKVSKEDKRRLEEEGLDKICATIGSDPIALEIKKLWYEYEDCTSEEARVVKDLDKLEMIVQADDYEKGQ-GLDLGEFFESTEGCFTTPQVQSWDKELREQRAAR 193          
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|1173959503|gb|OQS05729.1| (HD domain-containing protein 2-like isoform 1 [Thraustotheca clavata])

HSP 1 Score: 216.083 bits (549), Expect = 1.177e-67
Identity = 112/185 (60.54%), Postives = 136/185 (73.51%), Query Frame = 0
Query:   55 SASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLI-TDPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISA-EIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237
            SAS AL+FLRV G LK LKRTGWVN+KV  PESVA+HMYR+AMCS L+  D ++DR + MK+A+VHDLAEA VGDI PHD   + E K  +E+DAI  I   LG E  +A EI  LW EYE+ ST EA++VKDFDKFEMILQADEYE +Q G +L+DFF ST   F+ P V+ W +EL  QRD +
Sbjct:    7 SASSALEFLRVCGALKRLKRTGWVNHKVESPESVAEHMYRLAMCSLLLDNDSSVDRMKCMKMAIVHDLAEAFVGDITPHD-GVSDEDKHKMEKDAIDEICTKLGAESEAAKEIRELWHEYENASTEEAKMVKDFDKFEMILQADEYENAQ-GVDLQDFFNSTKGKFKTPLVQSWVSELNAQRDTR 189          
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|1173929759|gb|OQR82936.1| (HD domain-containing protein 2-like isoform 1 [Achlya hypogyna])

HSP 1 Score: 215.698 bits (548), Expect = 1.901e-67
Identity = 113/185 (61.08%), Postives = 136/185 (73.51%), Query Frame = 0
Query:   55 SASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLI-TDPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISA-EIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237
            SA+ ALDFLRV G+LK LKRTGWVN+KV  PESV+DHMYR+AMCS L+  D A+DR + +K+A+VHDLAEA VGDI PHD   + E K  +E DAI  I   LG E  +A EI  LW EYE+ ST EA++VKDFDKFEMILQADEYE +Q   +L+DFF ST   F+ P V+ W AEL  QRDA+
Sbjct:    7 SATSALDFLRVCGQLKRLKRTGWVNHKVQAPESVSDHMYRLAMCSLLLDNDSAVDRMKCIKMAIVHDLAEAFVGDITPHD-GVSDEDKHKMERDAIDEICTSLGPESQAAKEIRELWHEYENASTDEAKMVKDFDKFEMILQADEYESAQQV-DLQDFFNSTQGKFKTPLVQSWVAELNTQRDAR 189          
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|567998999|gb|ETL49052.1| (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 214.157 bits (544), Expect = 7.349e-67
Identity = 107/184 (58.15%), Postives = 138/184 (75.00%), Query Frame = 0
Query:   56 ASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLITDP--ALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237
            A  A++FLR+ G+LKTLKRTGWVNNKVALPESV+DHMYRM MC  L+ D   +++R++ +K+A+VHDLAE+LVGDI PHD    +E K  +E++A+  I   LG+   +AEI  LW EYE  ST EA++VKDFDKFEMILQAD+YER+Q    L+DFFQST   F+ P V+ W AEL  QR+A+
Sbjct:    9 ALSAIEFLRLCGRLKTLKRTGWVNNKVALPESVSDHMYRMGMCCMLLDDANESVNRSKCIKMAIVHDLAESLVGDITPHD-GVAEEDKHRMEKEALDEICNTLGNTPSAAEIRELWNEYEAGSTEEAKIVKDFDKFEMILQADDYERAQ-NIPLDDFFQSTKGKFRTPLVQSWAAELTDQRNAR 190          
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|953490262|emb|CEG46688.1| (hd domain-containing protein 2-like [Plasmopara halstedii])

HSP 1 Score: 213.772 bits (543), Expect = 7.770e-67
Identity = 105/188 (55.85%), Postives = 140/188 (74.47%), Query Frame = 0
Query:   52 SPPSASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLITDP--ALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237
            +   A+ A++FLR+ G LKTLKRTGWVNNKVA+PESVADHMYRM+MC  L+ D   AL+R++ +K+A+VHDLAE+L+GDI PHD    +E+K  +E++A+ +I   LG    + EI  LW EYE   T EA++VKDFDKFEMILQADEYE++Q   +L+DFFQST   F+ P V+ W +EL  QR+A+
Sbjct:    3 TKSKATCAIEFLRLCGSLKTLKRTGWVNNKVAMPESVADHMYRMSMCCMLLEDANEALNRSKCIKMAIVHDLAESLIGDITPHD-GIAEEVKHRMEKEALDNICSTLGDTPSALEIRELWNEYEAGLTEEAKMVKDFDKFEMILQADEYEKAQ-NISLDDFFQSTKGKFRTPLVQSWVSELSTQRNAR 188          
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|669165080|ref|XP_008618102.1| (hydrolase-HD superfamily protein [Saprolegnia diclina VS20] >gi|530730212|gb|EQC28454.1| hydrolase-HD superfamily protein [Saprolegnia diclina VS20])

HSP 1 Score: 213.772 bits (543), Expect = 7.942e-67
Identity = 112/185 (60.54%), Postives = 134/185 (72.43%), Query Frame = 0
Query:   55 SASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLI-TDPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISA-EIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237
            SAS ALDFLRV G+LK LKRTGWVN++V  PESV+DHMYR+AMCS L+  D ++DR + +K+A+VHDLAEA VGDI PHD   + E K  LE DAI  I   LG E  +A EI  LW EYE+ ST EA++VKDFDKFEMILQADEYE  Q   +L+DFF ST   F+ P V+ W  EL  QRDA+
Sbjct:    7 SASSALDFLRVCGQLKRLKRTGWVNHQVHAPESVSDHMYRLAMCSLLLDNDSSVDRMKCIKMAIVHDLAEAFVGDITPHD-GVSDEDKHKLERDAIDEICTKLGAESQAAKEIRDLWFEYENASTDEAKMVKDFDKFEMILQADEYESVQ-AVDLQDFFNSTQGKFKTPLVQSWVQELNTQRDAR 189          
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|675213663|ref|XP_008915716.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566032957|gb|ETI55868.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567970639|gb|ETK95664.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568028163|gb|ETM02106.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568058743|gb|ETM55352.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568084030|gb|ETM98975.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570336658|gb|ETO84606.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570942022|gb|ETP07279.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|970644676|gb|KUF85439.1| HD domain-containing protein 2 [Phytophthora nicotianae])

HSP 1 Score: 213.772 bits (543), Expect = 1.042e-66
Identity = 107/184 (58.15%), Postives = 138/184 (75.00%), Query Frame = 0
Query:   56 ASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLITDP--ALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237
            A  A++FLR+ G+LKTLKRTGWVNNKVALPESV+DHMYRM MC  L+ D   +++R++ +K+A+VHDLAE+LVGDI PHD    +E K  +E++A+  I   LG+   +AEI  LW EYE  ST EA++VKDFDKFEMILQAD+YER+Q    L+DFFQST   F+ P V+ W AEL  QR+A+
Sbjct:    9 ALSAIEFLRLCGRLKTLKRTGWVNNKVALPESVSDHMYRMGMCCMLLDDANESVNRSKCIKMAIVHDLAESLVGDITPHD-GVAEEDKHRMEKEALDEICNTLGNTPSAAEIRELWNEYEAGSTEEAKIVKDFDKFEMILQADDYERAQ-NIPLDDFFQSTKGKFRTPLVQSWAAELTDQRNAR 190          
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|695435506|ref|XP_009531722.1| (hypothetical protein PHYSODRAFT_355070 [Phytophthora sojae] >gi|348674474|gb|EGZ14293.1| hypothetical protein PHYSODRAFT_355070 [Phytophthora sojae])

HSP 1 Score: 211.46 bits (537), Expect = 7.512e-66
Identity = 108/184 (58.70%), Postives = 135/184 (73.37%), Query Frame = 0
Query:   56 ASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLITDP--ALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRDAK 237
            A  A++FLR+ G+LKTLKRTGWVNNKVALPESVADHMYRM+MC  L+ D    ++R + +K+A+VHDLAE+LVGDI PHD    +E K  +E++A+  I   LG    +AEI SLW EYE  ST EA++VKDFDKFEMILQAD+YER+     L+DFFQST   F+ P V+ W  EL  QRDA+
Sbjct:    7 ALSAIEFLRLCGRLKTLKRTGWVNNKVALPESVADHMYRMSMCCMLLDDANETVNRPKCIKMAIVHDLAESLVGDITPHD-GVAEEDKHRMEKEALDEICNTLGDTPSAAEIRSLWNEYEAGSTEEAKIVKDFDKFEMILQADDYERAH-NVPLDDFFQSTKGKFRTPLVQSWVEELTTQRDAR 188          
BLAST of EWM29513.1 vs. NCBI_GenBank
Match: gi|673036560|ref|XP_008872241.1| (hypothetical protein H310_08318 [Aphanomyces invadans] >gi|574471807|gb|ETV98813.1| hypothetical protein H310_08318 [Aphanomyces invadans])

HSP 1 Score: 208.764 bits (530), Expect = 8.720e-65
Identity = 104/181 (57.46%), Postives = 129/181 (71.27%), Query Frame = 0
Query:   55 SASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLIT-DPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQR 234
            +A+ A++FLR+ G+LK LKRTGWVN+KV  PESVADHMYRMAMC+ L+  D ++D+TR +K+A+VHDLAE+ VGDI PHD     E K  LE +AI  I   LGH   + EI  LW EYED +T EA++VKD DKFEMILQADEYE +Q   +L+ FF ST   FQ P V+ W  EL  QR
Sbjct:    7 TATSAVEFLRICGQLKRLKRTGWVNHKVNGPESVADHMYRMAMCTLLLDGDSSVDKTRCIKMAIVHDLAESYVGDITPHDGVSNAE-KHRLELNAINEICHKLGHSQAALEIKELWHEYEDAATDEAKLVKDIDKFEMILQADEYETAQDNLHLDQFFTSTDGKFQTPLVQSWVQELSAQR 186          
The following BLAST results are available for this feature:
BLAST of EWM29513.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112084|gb|EWM29513.1|1.049e-176100.00metal-dependent phosphohydrolase [Nannochloropsis ... [more]
gi|298710206|emb|CBJ26281.1|1.239e-7362.23conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173959503|gb|OQS05729.1|1.177e-6760.54HD domain-containing protein 2-like isoform 1 [Thr... [more]
gi|1173929759|gb|OQR82936.1|1.901e-6761.08HD domain-containing protein 2-like isoform 1 [Ach... [more]
gi|567998999|gb|ETL49052.1|7.349e-6758.15hypothetical protein, variant 1 [Phytophthora para... [more]
gi|953490262|emb|CEG46688.1|7.770e-6755.85hd domain-containing protein 2-like [Plasmopara ha... [more]
gi|669165080|ref|XP_008618102.1|7.942e-6760.54hydrolase-HD superfamily protein [Saprolegnia dicl... [more]
gi|675213663|ref|XP_008915716.1|1.042e-6658.15hypothetical protein, variant 1 [Phytophthora para... [more]
gi|695435506|ref|XP_009531722.1|7.512e-6658.70hypothetical protein PHYSODRAFT_355070 [Phytophtho... [more]
gi|673036560|ref|XP_008872241.1|8.720e-6557.46hypothetical protein H310_08318 [Aphanomyces invad... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1068rna1068Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications