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Properties
| Property Name | Value |
|---|
| Product | 40s ribosomal protein s21 |
| Orig transcript id | gnl|cribi|Naga_100050g5.6845.mrna |
| Orig protein id | gnl|cribi|Naga_100050g5.6845 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1050029..1050621 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1051 ID=rna1051|Name=rna1051|organism=Nannochloropsis gaditana|type=mRNA|length=2743bp
CTGTCCAACCCCCTCAAAAAGGACGGAGCTAATCTAATGCTTTGTTTCAA
ATTCCTCTGACACGACATGCTGCACCGTTGGGTGCCTGCGCGGATGAGAA
ATGTTGGATTGTAGGAGTATCATACCAGGCGAGGAGACGACCTGCCCCGC
ATGATCGATGTGTGGACGGCAAATGGTTGAGCATCCCTATCAGACCGTAC
TCACTCTCTTTTCCTTTCACAAACTTTCCTCGCTCATGATGTTGCGATGA
CTTACATTGCAGGGCAGGAAATAATGACCGACGCGGCCGTGGCCAGTCTC
AGTCTGGACGATAAGGAGCTCGCTAAGGAAATAGAAGCAAGCGTCGAGGT
GGGCGAGAATGCCTCCTTGGGCAAGCTGAAGGAGTTGGGCGTGTCCTTCA
AGCTCTACAGCCACCCAGAGACGGCGACCATCGACAAGCAGGCAGAGCAT
CTCGGACACTTGCCCGGTGTCTTGACGAAAAATTTGCTCCTTCGAGACAA
GAAGATTGGAACTTTCCTCATCACGGTCTTGCACGATCGCCCTACAGACA
CCAAAACCATTGCCAAGCTCCTCAAGCTGGGGGGCAAGGCCAACCTACGC
TTCGCGGACGAGGAGACCCTTGAGGGTCTGCTGAAGGTGAAACGAGGCGC
CGTGAGCGCCTTGGCGGTGCTGAACGACACCGGGAACGCAGTGACCCTGG
CTATGGATAAGGCTCTCATGGAACAACCGATTGTCAATCTGCATCCGCTT
CGCAACGATCGTACAGTTGCTATTCCCACAGCTGCCTTGCTCCAATTCGT
CCATGCCGCCGGTCACGAGCCCACGATGCTGGACTTTGACTCGGTGCCAG
TTGCCCCACCGCCCGGACCCGTCCCGCCCAAGGAGAAGAATCGCAGCGAC
TCCAAAAATGGTGGTGACAAAAGCACAGCAGTGGCCAAGGCATCAGCTTC
TACACCTGGACAGACCTTGCTGGGCATCGACGTGAGCAAGAAAGACAATT
TTGCCTTATGGTACACGCGGGTGATCACGTATAGCGAAATGATTGACTAC
TACGATATCTCCGGCTGTTACATCCTCCGGCCCTGGGCCTACAGCATTTG
GGAGTCCATCCAGCGCTGGCTCGACGCCGAGATCAAAGAACTGGGCGTTG
AAAATTCGTACTTTCCCTTGTTCGTCCCCAAGTCCGTCCTGGAGCGCGAG
AAGGACCACATCGAAGGCTTCGCGCCCGAAGTGGCCTGGGTGACGAAATC
CGGAGACTCGGACCTTGCCGAGCCCATTGCCATACGCCCGACCAGTGAAA
CGATCATGTATCCGCTTTTTAAGAAATGGATCCGCTCCCACCGGGACCTG
CCCTTGTGTCTGAACCAGTGGAGCAACGTGGTTCGGTGGGAGTTCAAGGA
CCCGACGCCCTTCCTGAGAAGCCGAGAGTTCCTGTGGCAGGAGGGGCACA
CTGCCCATGCCACGTTCGAGGAGTCTCAAAAGATGGTCATGGATATTCTC
GACCTGTACAAGAAGGTCTACGAGGAGCTCTTGGCCGTGCCCGTCATCCA
GGGCCGAAAAACGGAGATGGAGCGCTTCCCGGGCGGGGACATTACAACGA
CCGTGGAGGCCTACATCCATGGCTCGGGCCGCTCCGTCCAAGGGGCGACG
TCGCACAACCTTGGCCAGAATTTCGGGAAAATGTTCGAGATCCAATACGA
GGACAAGGCGGGGGGGCACGCGGTGCCCTGGCAGACGTCTTGGGGGCTGA
CGACCCGCAGCATCGGCGTGATGATCATGGCGCACGGGGACGACAAGGGC
CTCGTCCTCCCTCCCCGCGTCGCGCCCAAGCAGGTGGTGGTCATCCCCAT
CGTCAAAGCCAGCTTGTCTGCCGAGAACAAGGCGGCATTGCAAAGCTATG
CGGAGCGAATCACCACGGACCTGAAGGCGGCCAAGATCCGTGTGCACCTG
GACCATAGGGACAACTACACGCCTGGATGGAAATACAACCACTGGGAGCA
GAAGGGCGTGCCTCTCCGGCTGGAGGTGGGGCCCATGGACCTGGACAAGG
GGACGGCGAGGATGGTACGCCGAGACTCGGGTCTAAAGGTGGACTTAGCG
GGCGAAGCCGTGGTGCACACCGTCCTGCATGTATTAGAGGAGATACAGGC
CAATTTATTCGCCAAGTGCAAGGCGGAGCGGGACAAGAAACTGGTCAAAG
TGTGGGAGTGGAAAGATTTTGTGCCTGCCTTGGAGGAAAAGTGTGTGATT
TTGACGCCCTTCGTCAACGAGACGGAATGGGAGGAGGAGGTAAAGCGGAG
AAGCCGGGAGGAGGCCTTGGCGGGTGAAAGTGAGGACGCTCGGACCGCCA
CGTCGGCCGCGGCCAAGACACTATGCATCCCGTTTGATCAACCAGACCTT
TCCCCTGGGACGAAGTGCTTCGTGAGTGGAAAGGAGGCCACCTGTTGGGT
TTTATGGGGACGAAGCTATTAAGTTCGGAGGATTTACTTGCTTGAGGGAG
GAGGTTGCCTCGTAAAACAAGGATACATGAGTGCGTAGCAACAAAAAAAG
TGTGATACCACTTATTGATTGGAGGAGCTGGTAACGTTTTTTTCCCTCTA
AAACATATAACTGGTGTAGAGCGGCACGAGAAGCGCCGGAGAGACCACAT
CTCTGTCCTTAAACAATCCTAGAATTAAACGAAAGCAATAATTTGAAGTC
CCAAAGAACCCCACACAAAGCATAGAATGTGAAAAGCAACTTG back to topprotein sequence of rna1051 >rna1051-protein ID=rna1051-protein|Name=rna1051|organism=Nannochloropsis gaditana|type=polypeptide|length=80bp
MQNEAGQNVDLYIPRKCSWTNRVIHSKDHAAVQVNVANVDASGVYLQGDL
KTIAMAGYIRAKGEADAAMTEMVKKADSEQ back to topmRNA from alignment at CM002456.1:1050029..1050621+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1051 ID=rna1051|Name=rna1051|organism=Nannochloropsis gaditana|type=mRNA|length=593bp|location=Sequence derived from alignment at CM002456.1:1050029..1050621+ (Nannochloropsis gaditana)
ATGCAAAACGAGGCAGGTCAAAATGTGGACCTCTACATTCCCCGAAAATG
GTACGTGGGACGAGAAGCGAGAGAAATGAGAAGCAAGGGTATCGATTGTC
CTTCAGGGTAGAGAATGTAAATTGAGTTGGGTCTGACTACAAATGCGTGA
CTTTCGCTTGTAGTAAGCTCATGCATTAGCTTTGATGGATTCGAACGAAG
AGAGAACATGTTTACAtaccctccacctccctccccaacttCATGTGCAG
CTCCTGGACGAATCGCGTAATCCACTCCAAAGACCACGCTGCGGTGCAGG
TGCGATGGGGGGGGGTTGAATAGAAAGGCCTCGTACCAAGCAGCTGGTAC
TGATTCGATGGGAGGTCGGCTGCAGTATAGTGGGGATCTATCGGTTCGCG
CTCTGACAAAAAAATCATTTTATCATTCGGGACACGGTGCTACCCACAGG
TCAACGTGGCGAACGTGGATGCGAGCGGTGTATACTTACAAGGAGATTTG
AAGACAATCGCAATGGCAGGGTACATCCGTGCCAAGGGGGAAGCTGACGC
CGCTATGACAGAAATGGTAAAGAAAGCTGATAGCGAGCAGTAG back to topCoding sequence (CDS) from alignment at CM002456.1:1050029..1050621+ >rna1051 ID=rna1051|Name=rna1051|organism=Nannochloropsis gaditana|type=CDS|length=729bp|location=Sequence derived from alignment at CM002456.1:1050029..1050621+ (Nannochloropsis gaditana)
ATGCAAAACGAGGCAGGTCAAAATGTGGACCTCTACATTCCCCGAAAATG
CTCCTGGACGAATCGCGTAATCCACTCCAAAGACCACGCTGCGGTGCAGG
TCAACGTGGCGAACGTGGATGCGAGCGGTGTATACTTACAAGGAGATTTG
AAGACAATCGCAATGGCAGGGTACATCCGTGCCAAGGGGGAAGCTGACGC
CGCTATGACAGAAATGGTAAAGAAAGCTGATAGCGAGCAGTAGATGCAAA
ACGAGGCAGGTCAAAATGTGGACCTCTACATTCCCCGAAAATGCTCCTGG
ACGAATCGCGTAATCCACTCCAAAGACCACGCTGCGGTGCAGGTCAACGT
GGCGAACGTGGATGCGAGCGGTGTATACTTACAAGGAGATTTGAAGACAA
TCGCAATGGCAGGGTACATCCGTGCCAAGGGGGAAGCTGACGCCGCTATG
ACAGAAATGGTAAAGAAAGCTGATAGCGAGCAGTAGATGCAAAACGAGGC
AGGTCAAAATGTGGACCTCTACATTCCCCGAAAATGCTCCTGGACGAATC
GCGTAATCCACTCCAAAGACCACGCTGCGGTGCAGGTCAACGTGGCGAAC
GTGGATGCGAGCGGTGTATACTTACAAGGAGATTTGAAGACAATCGCAAT
GGCAGGGTACATCCGTGCCAAGGGGGAAGCTGACGCCGCTATGACAGAAA
TGGTAAAGAAAGCTGATAGCGAGCAGTAG back to top
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