|
|
Properties
| Property Name | Value |
|---|
| Product | Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein |
| Orig transcript id | gnl|cribi|Naga_100050g20.6855.mrna |
| Orig protein id | gnl|cribi|Naga_100050g20.6855 |
| Gene | NDA |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1021225..1023470 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1038 ID=rna1038|Name=rna1038|organism=Nannochloropsis gaditana|type=mRNA|length=1380bp
CCACCCTCATTCGTTCCTTGCCCCGTTCCATGCTTTGACACAGCTGCACG
ACTATTTTCTATCGACATCGCCAAGAAAGATCCTATTCCTTCGCACCGCG
TGGTTGACGCCAGCACTTTGCCACCCAAACCTGTGAATCAATATCAAAAT
TGCTCTCCCCCCCCCAAAGTACGATGAGTAACATGAACGATGAAGAGCTA
CAAAAACTCTTCATGTGGGTAGATACGATTCCTCTGAGTCGGTCTAAAAA
AAATATCAACCGGGATTTTAGTGACGCGGTGCTGGCCGCGGAGGTGATCG
GCCACTACTTTCCCCGCCTCGTTGACATGCACAACTATCCTGCAACTTCT
AACTCTGGACAAAAGCTGGCCAATTGGCGAGCCCTGAACGTAAAGGTTTT
AAAAAAACTAAAGTATCAGCAGGCGCCTCCTATGTTGGAAGACTTGGCAC
ACGCAAAGACTGGAGCTGTCGAGGTCTTCTTGCACGCGCTGCAATACAAG
CTCGCAAAGTACAAGGCCGACAAGAGCGGACCCACCGCGTCTCACACGAC
AGAGGGTGAAGCTCAATCGGTGTCAATCGAGCAGCTCTCCATTCATGGAG
GGCGCTCACCCACAGCTCCTGCTCTGACAGGGGCTGGTCAAGCGTGCAAA
AGCTTCGCTGCAATACCTGTCTCCTCATCGTCTTCTCCAAGCCCCGCGAC
CTCTCCTGCCCGCCAGCACGTCCTTTCAGAGCCATCGCATTCCACCTCTG
TTTTCTCGCTGTCCCTTCCCGGTGAGGCAGGAGCAGCAAATAGCTTGATA
AGTCGGGGCGAGAACAGCGGCAAAAGGCATCCACGGGCGGAGGAGCAGCC
GTCAGTGGACGAAGAGATCATGATGGAGAAGGAGGAGACCCTGGAGGAGC
TTCGGCAGACCGTGGACATGCTCCAACTAAAAGTGACAAAACTCGAGCAA
CTCCTACGTGTGAAGGAGATGAAGATCGACACGTTGGGCCGCGAAGTCGC
TCGTCTCAGTCTCACCGGAAAACCAGATCCAGATGGTGCCACTGGCGGAG
GGTTCATTGGAGATGGTTCATTCAGCCCCGCCAGGAGCACTTACAGCGTC
GATGATGCTGGAGAGAGAAGCGGAAAGGCGGCCGAGAAGCCCCTCACGCT
TCCCTCGTATGCACGCGTGGGTGTTTAGAGCGGAAGACGACGCCTTGGAA
ATGGTGAATGACGGAGCAGTAGGAGCAATAGCTGAGTTTGTACATGTAAA
CTTCACAAAACTCAAGAGGAAGCATGCGCGAGGATAATCTGCTTCATGTA
TGGTTAAGGCGCAAAAGTAACTAAGAGCAAGCGTTTGATCTCCGCGCTAA
CAAGGCTACGCCATTCAGTGAGAACTATCG back to topprotein sequence of rna1038 >rna1038-protein ID=rna1038-protein|Name=rna1038|organism=Nannochloropsis gaditana|type=polypeptide|length=636bp
MVEEVLLKRLGKSRHSASSSQSRTSLTMSIRVAPKVFFLACCCLLPFLTC
LHAFLVAPSSSSALALLKRSAVPPPQQTEEAVRSKLREKNTGPQSEPPSP
STGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPD
PSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPR
NFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSI
TCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQI
NDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELR
DFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQ
KLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGP
LPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVIND
KPLPANAQAASQQGFFLGRLLSKNIDFTRSIPERTGPITTPGELLSVGEK
RENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKRAIKSSGEAGFLLWR
SVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRFNET back to topmRNA from alignment at CM002456.1:1021225..1023470- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1038 ID=rna1038|Name=rna1038|organism=Nannochloropsis gaditana|type=mRNA|length=2246bp|location=Sequence derived from alignment at CM002456.1:1021225..1023470- (Nannochloropsis gaditana)
ATGGTGGAGGAGGTTATGAGTGCTTGTGGCCCAAAGGCTTCAAATCAAAA
AAATAATTCAGGCTCTTTGAGTTCGCGAGAAGTTTTTTTTTTTCTATTTG
ATGCCATTCTTAAAGTTTGTAGATGATTCTTTGAAAAAAAAAGCTTGCAG
GGCGGCAAGTACCAATGCTTCCTCCCGGCAGACGCGGCCATCGCGGACAG
CCCTCCGCCCCAGCGAGTGTTCTCCTTGCTCACAACGCCACGAGCAAAGA
AGATCAGCCAAAGTGGATCAAACTTCGGTTATTTCCCCGCTTCCTCTACA
TTTGTAAGCTTGTCATTTTCACTGTCCTTATACACGTGACTGTACAGGTG
CTGCTGAAAAGACTGGGCAAAAGTAGACACTCCGCCAGCTCTTCTCAGTC
TCGAACGTCCCTGACGATGTCGATACGGGTCGCACCAAAAGTGTTCTTCC
TCGCCTGCTGCTGCCTACTACCCTTCCTCACGTGCTTGCATGCCTTTCTT
GTAGCCCCCTCGTCCTCTTCAGCACTTGCCTTGCTTAAGCGGTCTGCGGT
ACCTCCACCGCAGCAGACGGAGGAAGCAGTGCGCTCGAAGTTACGTGAGA
AAAACACAGGGCCGCAATCTGAACCCCCCAGTCCCTCTACAGGCAATAGC
ATGATGGAAGAGGACAGCAAAATCATTCAAGAGCTCACGAAAGAGCGACC
ATACATCCAGTTTCTTTCCGAAAAGGCTGTAACGGTGTTGGATGATACTT
TTTTGAGCTTAAAGGAGTCCATTACGGCTCCTGACCCCTCTGAATTCAGG
CGACGAGTCAAAGAGGGCAAGGAGTCAAAGGACACACGGCAACGTATTGT
TGTGCTGGGTACGGGATGGGGAGCGCACGCATTCTTACAGTCCGTGGACG
CGGTGAAGTATGAGGTAGTTGTGGTGTCGCCCAGGAACTTCATGCTATTC
ACACCCATGCTGGCCGGCTCGGCAGTGGGAACCGTGGAGTTTCTTAGCAT
CACTGAGCCCATCCGACGCGTCAATCCCTACGCTGACTACCTTGAAGCGA
CGTGCACGCACGTGAATGCTGCACAAAAAAGCATTACCTGCCAGTCCGTC
ATCTGCGAGGGGAACAGCTGTGACATCGAGGAGTTCGAGCTTCCCTACGA
CATGTTGCTGGTGGCCGTCGGGGCAACCACCAACACGTACGGGATTCCCG
GCGTCAAGGAATACTGCCATTTCCTCAAACAAATCAACGACGCTGTCAAG
CTGCGCACTTCCATCGGCAATGCTTTCGAACGCGCCAACCTCCCGGGACT
GTCAGACGCCCAACGGACGCAGGCCTTGACCTTCGTCATAGTGGGCGCGG
GGCCCACGGGTGTGGAATTCACCGCCGAGCTACGGGACTTCGTGGAGGAG
GACGTGCCCAAATTCTACCCCCACCTCTTACCCTTCGTCCGGATCAAGCT
TGTGGAGGCGAGCGACCGGGTCCTGACCATGTTCGACGAGGCTCTCCAGG
CTGAGGCCGTCAAGAGGCTGACCGAGGCGCCCCAAAAGCTGGTGGAGCAA
GGGCTGATCGGCGAAGATATGACGGAAGTATTGCTGAAAGTGGGCGTGAA
GGAAGTCAAAAACCGCGACATCGTCCTGTCGGACGGGAGGAGTCTCCCCT
ACGGCCTGGCCGTGTGGGCGGCGGGGAACGGGCCCCTGCCGCTGGTCTCG
AACCTGATCAAGCAATTGCCGGAGCAGGAGGAAAAGCAAGCTTTTGGGCG
CGGCCGACTGGTGACGGATGAGTGGCTGCGAGTCAAAGGCGCAGAGGGGG
TGCTGGCGATCGGGGATTGCTGTGTGATCAACGACAAGCCCCTGCCGGCC
AATGCCCAGGCGGCTTCGCAGCAGGGCTTCTTCCTTGGTCGCCTCCTAAG
CAAGAATATTGATTTCACGCGATCCATTCCAGAGCGAACAGGCCCGATCA
CGACGCCTGGCGAGCTTCTTTCCGTGGGAGAGAAGAGGGAGAACGGGAAA
ATTTATGCGAAGGGCTTTCAATTCTTAAATCTGGGTACCCTAGCGTATAC
AGGTGGAGATAGCGCCTTGGCTCAGATTGCGGTCGACAAGAGAGCGATCA
AGTCAAGCGGAGAAGCCGGATTTTTGTTATGGCGGTCGGTCTACTTGTCC
AAGCAAGTGAGCCTGCGCAATCGGGCTCTAGTCTTCTTCGATTGGGTCAA
GAGCCGATTGTGGGGCCGCGATCTCACCAGGTTCAATGAGACGTAG back to topCoding sequence (CDS) from alignment at CM002456.1:1021225..1023470- >rna1038 ID=rna1038|Name=rna1038|organism=Nannochloropsis gaditana|type=CDS|length=3822bp|location=Sequence derived from alignment at CM002456.1:1021225..1023470- (Nannochloropsis gaditana)
GTGCTGCTGAAAAGACTGGGCAAAAGTAGACACTCCGCCAGCTCTTCTCA
GTCTCGAACGTCCCTGACGATGTCGATACGGGTCGCACCAAAAGTGTTCT
TCCTCGCCTGCTGCTGCCTACTACCCTTCCTCACGTGCTTGCATGCCTTT
CTTGTAGCCCCCTCGTCCTCTTCAGCACTTGCCTTGCTTAAGCGGTCTGC
GGTACCTCCACCGCAGCAGACGGAGGAAGCAGTGCGCTCGAAGTTACGTG
AGAAAAACACAGGGCCGCAATCTGAACCCCCCAGTCCCTCTACAGGCAAT
AGCATGATGGAAGAGGACAGCAAAATCATTCAAGAGCTCACGAAAGAGCG
ACCATACATCCAGTTTCTTTCCGAAAAGGCTGTAACGGTGTTGGATGATA
CTTTTTTGAGCTTAAAGGAGTCCATTACGGCTCCTGACCCCTCTGAATTC
AGGCGACGAGTCAAAGAGGGCAAGGAGTCAAAGGACACACGGCAACGTAT
TGTTGTGCTGGGTACGGGATGGGGAGCGCACGCATTCTTACAGTCCGTGG
ACGCGGTGAAGTATGAGGTAGTTGTGGTGTCGCCCAGGAACTTCATGCTA
TTCACACCCATGCTGGCCGGCTCGGCAGTGGGAACCGTGGAGTTTCTTAG
CATCACTGAGCCCATCCGACGCGTCAATCCCTACGCTGACTACCTTGAAG
CGACGTGCACGCACGTGAATGCTGCACAAAAAAGCATTACCTGCCAGTCC
GTCATCTGCGAGGGGAACAGCTGTGACATCGAGGAGTTCGAGCTTCCCTA
CGACATGTTGCTGGTGGCCGTCGGGGCAACCACCAACACGTACGGGATTC
CCGGCGTCAAGGAATACTGCCATTTCCTCAAACAAATCAACGACGCTGTC
AAGCTGCGCACTTCCATCGGCAATGCTTTCGAACGCGCCAACCTCCCGGG
ACTGTCAGACGCCCAACGGACGCAGGCCTTGACCTTCGTCATAGTGGGCG
CGGGGCCCACGGGTGTGGAATTCACCGCCGAGCTACGGGACTTCGTGGAG
GAGGACGTGCCCAAATTCTACCCCCACCTCTTACCCTTCGTCCGGATCAA
GCTTGTGGAGGCGAGCGACCGGGTCCTGACCATGTTCGACGAGGCTCTCC
AGGCTGAGGCCGTCAAGAGGCTGACCGAGGCGCCCCAAAAGCTGGTGGAG
CAAGGGCTGATCGGCGAAGATATGACGGAAGTATTGCTGAAAGTGGGCGT
GAAGGAAGTCAAAAACCGCGACATCGTCCTGTCGGACGGGAGGAGTCTCC
CCTACGGCCTGGCCGTGTGGGCGGCGGGGAACGGGCCCCTGCCGCTGGTC
TCGAACCTGATCAAGCAATTGCCGGAGCAGGAGGAAAAGCAAGCTTTTGG
GCGCGGCCGACTGGTGACGGATGAGTGGCTGCGAGTCAAAGGCGCAGAGG
GGGTGCTGGCGATCGGGGATTGCTGTGTGATCAACGACAAGCCCCTGCCG
GCCAATGCCCAGGCGGCTTCGCAGCAGGGCTTCTTCCTTGGTCGCCTCCT
AAGCAAGAATATTGATTTCACGCGATCCATTCCAGAGCGAACAGGCCCGA
TCACGACGCCTGGCGAGCTTCTTTCCGTGGGAGAGAAGAGGGAGAACGGG
AAAATTTATGCGAAGGGCTTTCAATTCTTAAATCTGGGTACCCTAGCGTA
TACAGGTGGAGATAGCGCCTTGGCTCAGATTGCGGTCGACAAGAGAGCGA
TCAAGTCAAGCGGAGAAGCCGGATTTTTGTTATGGCGGTCGGTCTACTTG
TCCAAGCAAGTGAGCCTGCGCAATCGGGCTCTAGTCTTCTTCGATTGGGT
CAAGAGCCGATTGTGGGGCCGCGATCTCACCAGGTTCAATGAGACGTAGA
TGGTGGAGGAGGTGCTGCTGAAAAGACTGGGCAAAAGTAGACACTCCGCC
AGCTCTTCTCAGTCTCGAACGTCCCTGACGATGTCGATACGGGTCGCACC
AAAAGTGTTCTTCCTCGCCTGCTGCTGCCTACTACCCTTCCTCACGTGCT
TGCATGCCTTTCTTGTAGCCCCCTCGTCCTCTTCAGCACTTGCCTTGCTT
AAGCGGTCTGCGGTACCTCCACCGCAGCAGACGGAGGAAGCAGTGCGCTC
GAAGTTACGTGAGAAAAACACAGGGCCGCAATCTGAACCCCCCAGTCCCT
CTACAGGCAATAGCATGATGGAAGAGGACAGCAAAATCATTCAAGAGCTC
ACGAAAGAGCGACCATACATCCAGTTTCTTTCCGAAAAGGCTGTAACGGT
GTTGGATGATACTTTTTTGAGCTTAAAGGAGTCCATTACGGCTCCTGACC
CCTCTGAATTCAGGCGACGAGTCAAAGAGGGCAAGGAGTCAAAGGACACA
CGGCAACGTATTGTTGTGCTGGGTACGGGATGGGGAGCGCACGCATTCTT
ACAGTCCGTGGACGCGGTGAAGTATGAGGTAGTTGTGGTGTCGCCCAGGA
ACTTCATGCTATTCACACCCATGCTGGCCGGCTCGGCAGTGGGAACCGTG
GAGTTTCTTAGCATCACTGAGCCCATCCGACGCGTCAATCCCTACGCTGA
CTACCTTGAAGCGACGTGCACGCACGTGAATGCTGCACAAAAAAGCATTA
CCTGCCAGTCCGTCATCTGCGAGGGGAACAGCTGTGACATCGAGGAGTTC
GAGCTTCCCTACGACATGTTGCTGGTGGCCGTCGGGGCAACCACCAACAC
GTACGGGATTCCCGGCGTCAAGGAATACTGCCATTTCCTCAAACAAATCA
ACGACGCTGTCAAGCTGCGCACTTCCATCGGCAATGCTTTCGAACGCGCC
AACCTCCCGGGACTGTCAGACGCCCAACGGACGCAGGCCTTGACCTTCGT
CATAGTGGGCGCGGGGCCCACGGGTGTGGAATTCACCGCCGAGCTACGGG
ACTTCGTGGAGGAGGACGTGCCCAAATTCTACCCCCACCTCTTACCCTTC
GTCCGGATCAAGCTTGTGGAGGCGAGCGACCGGGTCCTGACCATGTTCGA
CGAGGCTCTCCAGGCTGAGGCCGTCAAGAGGCTGACCGAGGCGCCCCAAA
AGCTGGTGGAGCAAGGGCTGATCGGCGAAGATATGACGGAAGTATTGCTG
AAAGTGGGCGTGAAGGAAGTCAAAAACCGCGACATCGTCCTGTCGGACGG
GAGGAGTCTCCCCTACGGCCTGGCCGTGTGGGCGGCGGGGAACGGGCCCC
TGCCGCTGGTCTCGAACCTGATCAAGCAATTGCCGGAGCAGGAGGAAAAG
CAAGCTTTTGGGCGCGGCCGACTGGTGACGGATGAGTGGCTGCGAGTCAA
AGGCGCAGAGGGGGTGCTGGCGATCGGGGATTGCTGTGTGATCAACGACA
AGCCCCTGCCGGCCAATGCCCAGGCGGCTTCGCAGCAGGGCTTCTTCCTT
GGTCGCCTCCTAAGCAAGAATATTGATTTCACGCGATCCATTCCAGAGCG
AACAGGCCCGATCACGACGCCTGGCGAGCTTCTTTCCGTGGGAGAGAAGA
GGGAGAACGGGAAAATTTATGCGAAGGGCTTTCAATTCTTAAATCTGGGT
ACCCTAGCGTATACAGGTGGAGATAGCGCCTTGGCTCAGATTGCGGTCGA
CAAGAGAGCGATCAAGTCAAGCGGAGAAGCCGGATTTTTGTTATGGCGGT
CGGTCTACTTGTCCAAGCAAGTGAGCCTGCGCAATCGGGCTCTAGTCTTC
TTCGATTGGGTCAAGAGCCGATTGTGGGGCCGCGATCTCACCAGGTTCAA
TGAGACGTAGATGGTGGAGGAG back to top
|