EWM29632.1, cds1037 (CDS) Nannochloropsis gaditana

Overview
NameEWM29632.1
Unique Namecds1037
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1023459..1023470 -
Alignment locationCM002456.1:1021225..1023123 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29632.1
ProductPyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
Orig transcript idgnl|cribi|Naga_100050g20.6855.mrna
GeneNDA
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1023459..1023470 -
CM002456.1supercontigCM002456.1:1021225..1023123 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR001327Pyr_OxRdtase_NAD-bd_dom
IPR023753Pyr_nucl-diS_OxRdtase_FAD/NAD
Homology
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|585112204|gb|EWM29632.1| (Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1304.27 bits (3374), Expect = 0.000e+0
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 0
Query:    1 MVEEVLLKRLGKSRHSASSSQSRTSLTMSIRVAPKVFFLACCCLLPFLTCLHAFLVAPSSSSALALLKRSAVPPPQQTEEAVRSKLREKNTGPQSEPPSPSTGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFTRSIPERTGPITTPGELLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRFNET 636
            MVEEVLLKRLGKSRHSASSSQSRTSLTMSIRVAPKVFFLACCCLLPFLTCLHAFLVAPSSSSALALLKRSAVPPPQQTEEAVRSKLREKNTGPQSEPPSPSTGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFTRSIPERTGPITTPGELLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRFNET
Sbjct:    1 MVEEVLLKRLGKSRHSASSSQSRTSLTMSIRVAPKVFFLACCCLLPFLTCLHAFLVAPSSSSALALLKRSAVPPPQQTEEAVRSKLREKNTGPQSEPPSPSTGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFTRSIPERTGPITTPGELLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRFNET 636          
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|299473176|emb|CBN78752.1| (NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus])

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 331/603 (54.89%), Postives = 415/603 (68.82%), Query Frame = 0
Query:   60 SSSALALLKRSAVPPPQQTEEAVRSKLREK---NTGPQSEPPSPSTGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFTRSIPERT-----------------GPITTP-----GELLSVGEKRE----NGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 633
            S+ A   L+ +++ P + T      +LREK   N    SE  S    N    ED++ + E+ KERPY   L+EKA   +D    + K     PD S           +   + R+VVLGTGW AHA L+ +DA K+EV  VSPRNF LFTPMLA SAVGTVE+ SITEPIR+VNP A+YLEATCT ++ AQK+ITC++V+CEG +C IE+FELPYD L+V+VGATTNT+  PGV E+C FLKQ+ DA KLR +IGN FERANLP +++ QR  ALTF IVGAGPTGVE  AELRDF+EE+ P+FYPHLL +VRIKL+EASD+VL++FD ALQ  AV  LTE   KL++ G I  +MTEVLLKVGVK V    + LSDG ++PYGLAVWAAGNGPLPLV +LI+ + EQ+EK A+GRGRLVTD+WLR+ GA  V A+GDC VINDKPLP  AQ ASQQG +L RL S+  +F+ ++P++                      TP     GE + + EK       GK +AK FQFLNLG LAYTG   ALAQ+ V K ++KS+G  G+LLWRS+YLSKQVS RNR LV  DWVK++++GRD+TR 
Sbjct:   30 SAGASRRLRNNSLSPLRVTSTKTEEELREKLARNNEDLSEVDSKVLENFGGLEDAQFLAEIKKERPYFAVLAEKASETVDSILKTSKSE--RPDSS---------SSTGVPKPRVVVLGTGWAAHALLKEIDASKFEVTTVSPRNFFLFTPMLAASAVGTVEYRSITEPIRKVNPEANYLEATCTGIDVAQKTITCENVVCEGTTCTIEDFELPYDYLVVSVGATTNTFNTPGVMEHCIFLKQVQDAQKLRKAIGNCFERANLPTVTEEQRIAALTFAIVGAGPTGVECCAELRDFIEEEGPRFYPHLLKYVRIKLIEASDKVLSVFDGALQKAAVSSLTERSTKLIDDGFIETEMTEVLLKVGVKAVTGTQLELSDGSNIPYGLAVWAAGNGPLPLVLDLIQGVEEQKEKAAWGRGRLVTDDWLRLLGAPSVFALGDCAVINDKPLPQTAQVASQQGTYLARLFSRGFEFSATVPQKNTDNEGVEAAAGGSAASSDGSDTPLGEDGGEKVPLSEKLGLSIVKGK-FAKPFQFLNLGILAYTGAGGALAQVQVGKESVKSTGATGYLLWRSIYLSKQVSWRNRLLVGTDWVKTKIFGRDITRL 620          
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|873233451|emb|CEM03292.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 617.076 bits (1590), Expect = 0.000e+0
Identity = 313/590 (53.05%), Postives = 412/590 (69.83%), Query Frame = 0
Query:   47 FLTCLHAFLVAPSSSSALALLKRSAVPPPQQTEEAVRSKLREKNTGPQSEPPSPSTGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLI---GEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDF-TRSIPERTGPITTPGELLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTR 632
            F+  L A    PS    L L +RSA    +  EE +R++L  +N        +  +    ++    ++++L K RPY   +++K +  +DD  +SL++  +A       R  ++GK     R+RIVVLGTGWG+HAFL +VDA KYEV+V+SPRNF LFTPMLAG+A+GTVE+ SIT+PIR VNP  DY EATCT ++  +K++ CQSV+CEG SC IE+FE+PYD LL+ VGA T TY IPGVKE+C FLKQ+ DA KLR +IGN FERAN+PGLSDAQR   LTFV+VGAGPTGVE  +EL DFVE+DVP++YPHLL  VR+KLVEA+D VL  FDE+L+ +A +RL   P +LV +GL+    + +TE+ L+ GVKE+ + ++VL++G  + YGL VWAAGNGPLPLV + I +  EQ+  Q+  RGRLV D WLRVKGA+ + AIGDC ++++ PLPA AQ ASQQG FLGRLL+ ++D     IP+R G   +  E+L  G        Y K FQFLNLG LAYTG +SALAQ+  D+  IK +G  G+LLWR VYLSKQVS RNR LV  DW+K+R++GRD+ R
Sbjct:   42 FIPLLPALRQRPSDGR-LHLARRSA--STKLDEEKLRNELASRNVD------AAESALGEVDVGGGLLKDLVKPRPYAAVVTQKFIENVDDFLVSLRQRPSA-------RGAEKGK-----RERIVVLGTGWGSHAFLSTVDASKYEVIVISPRNFFLFTPMLAGAALGTVEYRSITDPIRNVNPLVDYYEATCTDIDPVKKTVACQSVVCEGTSCTIEQFEVPYDRLLIGVGAQTATYNIPGVKEHCQFLKQVGDAKKLRRAIGNVFERANIPGLSDAQRQAILTFVVVGAGPTGVELMSELLDFVEQDVPRYYPHLLQHVRVKLVEATDTVLMAFDESLRQKAAERLLSRPDRLVARGLLDASADPLTEIKLQAGVKEITDTEVVLTNGDRVAYGLVVWAAGNGPLPLVLSAIDKFSEQKAAQSKARGRLVVDPWLRVKGADDIFAIGDCTLMDETPLPATAQVASQQGAFLGRLLNHDVDLRAHPIPKRLGRRGSLSEVLIDGSND-----YPKAFQFLNLGILAYTGDNSALAQVQFDQNVIKQAGTVGWLLWRGVYLSKQVSWRNRFLVGVDWLKTRMFGRDICR 605          
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|219117515|ref|XP_002179552.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409443|gb|EEC49375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 540.421 bits (1391), Expect = 0.000e+0
Identity = 279/536 (52.05%), Postives = 365/536 (68.10%), Query Frame = 0
Query:  114 IQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAV---KRLTEAPQKLVEQGLIGE-DMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQL-PEQEEKQAFGRGRLVTDEWLRVKGAEG-VLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFTRSI-------PERTGPITTPGELL-SVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIA--VDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 633
            ++ +TK R Y  FL+EK V  L+ T   + +S      +       +   S   ++R+VVLGTGWG+ + L+ +D   Y+V V+SPRN+ LFTPMLAG++VGTVE+ SITEPIR +NP A++LEAT T+++    ++TC+SVICEGNSCDI++F + YD L+VAVGA TNT+GIPGVKEYC++L+Q+ DA ++RTSI N FERANLPGLSD +R + LTF ++GAGPTG+EF AELRDFVEED PK+YP LL +VRIK++EAS  VL  FD+ LQ EA+   KR T      V + L     MTE+LL+  VKEVK   I+L++G+ +PYG+AVWAAGNGP+PL   LI+ L  EQ   QA  RGR+  D W+R  G +G VL+ GDC  +  + LPA AQ ASQQG +L +LL+K  +FT ++       P R  P  T      ++     N   YAK FQFLNLG LAYTGG SALAQ+    D  +++  G+ G  LWRSVYL+KQVS RNR LV  DW K RL+GRD+TR 
Sbjct:  119 MKRMTKPRAYPLFLAEKGVEFLEGTVHDIAKSFQRTAETGAATSTSDVNGSVGQKERVVVLGTGWGSASLLKEIDTDLYDVTVISPRNYFLFTPMLAGASVGTVEYRSITEPIRAINPQANFLEATATNIDTKTNTVTCESVICEGNSCDIQDFSVQYDRLVVAVGAQTNTFGIPGVKEYCNYLRQVEDARRVRTSIINCFERANLPGLSDEERIRNLTFAVIGAGPTGIEFAAELRDFVEEDGPKYYPKLLQYVRIKVIEASPMVLAPFDKELQQEAIAQLKRPTMISDPKVAKLLPPNFQMTELLLEASVKEVKEDRILLNNGQEIPYGIAVWAAGNGPIPLTLQLIESLGDEQASAQAVARGRVAVDCWMRAIGGQGKVLSFGDCSCMFQQQLPATAQVASQQGEYLAKLLNKKFEFTPALTEDGIFPPPRKDPARTQTSFSDAIAAFASNNYEYAKPFQFLNLGILAYTGGGSALAQVTPVPDGASVQGKGKLGNALWRSVYLTKQVSWRNRLLVMNDWTKRRLFGRDITRL 654          
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|1210517176|dbj|GAX23811.1| (NADH dehydrogenase [Fistulifera solaris])

HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0
Identity = 284/551 (51.54%), Postives = 376/551 (68.24%), Query Frame = 0
Query:  101 STGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVE----QGLIGE--DMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQA-FGRGRLVTDEWLRVKGAEG-VLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFT--RS-----IPERTGPITTPGELL-SVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQI--AVDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 633
            ST +S++ +    I+ +TK R Y  FL+EKA   ++ T+  +  +  APDP     RV  G   K   +RIV+LG+GWG+ +FL+ +D   Y+V VVSPRN  +FTPMLAG++VGTVEF SI EPIR +N  A+YLEA  T ++  +K ++C+SV CEGNSC IE+F +PYD L+V VGA TNT+GIPGV+E C+FLKQI DA ++R SI N FERANLPGLSD +R Q LTF ++GAGPTG+EF AELRDFVE+D PK+YP LL +VRIK++EAS  VL  FD++LQ EA+ ++ ++   L++    + L+ E   +TE+LL   VKEV    I L+DG  +PYG+AVWAAGNGPLP+  +LI ++ E++ KQ    RGRL  D W+RV G+EG +LA GDC  I    LPA AQ ASQQG +L  L+++  +F+  RS      P +  P+ T      ++     N   YAK FQFLNLG LAYTGG SALAQ+  A +  +IK +G+ G  +WRSVYLSKQVS RNR LV  DW K +L+GRD+TR 
Sbjct:  115 STSSSVLAQQ---IERMTKPRAYPLFLAEKAAEFVEATYKDVVHTFAAPDP----YRVSNGNSQK---ERIVILGSGWGSISFLKDIDTDLYDVTVVSPRNHFVFTPMLAGASVGTVEFRSICEPIREINLKANYLEAIATDIDTEKKIVSCESVFCEGNSCAIEDFSIPYDRLIVTVGAQTNTFGIPGVRERCNFLKQIEDARRIRASIVNCFERANLPGLSDEEREQNLTFAVIGAGPTGIEFAAELRDFVEQDGPKYYPRLLKYVRIKIIEASSTVLAPFDKSLQEEAILQMNKS--VLIKDPEVRNLLPERFKLTELLLDSSVKEVGEDTIFLNDGTKVPYGMAVWAAGNGPLPITLSLIDKMGEEQTKQQDVARGRLAIDPWMRVIGSEGQILAFGDCSCITAGQLPATAQVASQQGEYLANLMNRKYEFSPPRSEDGIFPPPKKDPVRTESSFSDAIASFAINNSEYAKPFQFLNLGILAYTGGGSALAQVTPAPNAESIKGTGKIGNAVWRSVYLSKQVSWRNRLLVLNDWTKRQLFGRDVTRI 653          
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|1210522911|dbj|GAX18254.1| (NADH dehydrogenase [Fistulifera solaris])

HSP 1 Score: 530.02 bits (1364), Expect = 2.859e-178
Identity = 277/538 (51.49%), Postives = 369/538 (68.59%), Query Frame = 0
Query:  114 IQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVE----QGLIGE--DMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQA-FGRGRLVTDEWLRVKGAEG-VLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFT--RS-----IPERTGPITTPGELL-SVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQI--AVDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 633
            I+ +TK R Y  FL+EKA   ++ T+  +  +  APD      RV     S   ++RIV+LG+GWG+ +FL+ +D   Y+V VVSPRN  +FTPMLAG++VGTVEF SI EPIR +N  A+YLEA  T ++  +K ++C+SV CEGNSC IE+F +PYD L+V VGA TNT+GIPGV+E C+FLKQI DA ++R SI N FERANLPGL+D +R Q LTF ++GAGPTG+EF AELRDFVE+D PK+YP LL +VRIK++EAS  VL  FD++LQ EA+ ++ ++   L++    + L+ E   +TE+LL   VKEV    I L+DG  +PYG+AVWAAGNGPLP+  +LI ++ E+++KQ    RGRL  D W+RV G++G +LA GDC  I    LPA AQ ASQQG +L  L+++  +F+  RS      P +  P+ T      ++     N   YAK FQFLNLG LAYTGG SALAQ+  A +  +IK +G+ G  +WRSVYLSKQVS RNR LV  DW K +L+GRD+TR 
Sbjct:  121 IERMTKPRAYPLFLAEKAAEFVEATYKDVVHTFAAPD----SYRVSN---SNSQKERIVILGSGWGSISFLKDIDTDLYDVTVVSPRNHFVFTPMLAGASVGTVEFRSICEPIREINLKANYLEAIATDIDTEKKIVSCESVFCEGNSCAIEDFSIPYDRLIVTVGAQTNTFGIPGVRERCNFLKQIEDARRIRASIVNCFERANLPGLTDEEREQNLTFAVIGAGPTGIEFAAELRDFVEQDGPKYYPRLLKYVRIKIIEASSTVLAPFDKSLQEEAILQMNKS--VLIKDPEVRNLLPERFKLTELLLDSSVKEVGEDTIFLNDGTKVPYGMAVWAAGNGPLPITLSLIDKMGEEQKKQQDVARGRLAIDPWMRVIGSDGQILAFGDCSCITAGQLPATAQVASQQGEYLANLMNRKYEFSPPRSEDGIFPPPKKDPVRTESSFSDAIASFAINNSEYAKPFQFLNLGILAYTGGGSALAQVTPAPNAESIKGTGKIGNAVWRSVYLSKQVSWRNRLLVLNDWTKRQLFGRDVTRI 649          
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|1072237409|gb|OEU22136.1| (hypothetical protein FRACYDRAFT_205063 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 522.702 bits (1345), Expect = 5.035e-177
Identity = 270/549 (49.18%), Postives = 370/549 (67.40%), Query Frame = 0
Query:  107 MEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPD--PSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQ--KLVEQGLIGE--DMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQL-PEQEEKQAFGRGRLVTDEWLRVKGAEG-VLAIGDCCVIN---DKPLPANAQAASQQGFFLGRLLSKNIDFTRSIPERTG-----PITTPGELLSVGEKRENGKI----YAKGFQFLNLGTLAYTGGDSALAQIAVDKRA--IKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 633
            M  + + ++ L K+RPY  FL+EK   +++DT   L +S +  D   +       +G+     R+++VVLGTGWGA AFL+ +D   Y+V ++SPRN+ +FTPMLAG++VGTV++ SITEPIR +N  A +LE+  T V+   K++TC+SV+C+GNSC+I EF +PYD L+V +GA TNT+GIPGV+E+C+FLKQI DA ++RT+I N FERANLPGLSD +R   LTF ++GAGPTG+EF AELRDFVEED PK+YP LL +VRIK++EAS  +L  FD++LQ EA+ ++    +   +    L+ E   + E+LL   VKEV  + I+L+DG ++ YGL+VWAAGNGPLPL   ++ +L  EQ  +Q   RGR+VTD W+R KG+ G +LA GDC       D PLPA  Q A+QQG +L +L++K  D + +I    G     P   P    +V E   N       YAK FQFLNLG LAYTGG SALAQ+     A  IK +G+ G  LW+SVY+SKQVS RNR +V  DWV+ +++GRD+TR 
Sbjct:    1 MSIEREKLERLIKKRPYALFLAEKVAEIVEDTVEGLFKSKSNNDNEAASSSSSPSDGQ-----REKVVVLGTGWGAAAFLKGIDTRLYDVTIISPRNYFVFTPMLAGASVGTVDYRSITEPIREINRDARFLESLATDVDEVGKTLTCESVVCDGNSCEINEFSIPYDRLVVTIGAQTNTFGIPGVREHCNFLKQIEDARRIRTAIVNCFERANLPGLSDEERINILTFAVIGAGPTGIEFAAELRDFVEEDGPKYYPTLLKYVRIKVIEASSTILAPFDKSLQEEAITQMNRNVEFKDISIYRLLPERFKLVELLLDSSVKEVTAKTILLNDGNTINYGLSVWAAGNGPLPLTLQIVDKLGDEQSSEQNVARGRIVTDAWMRAKGSNGSILAFGDCSCTTEGPDGPLPATGQVAAQQGEYLAKLMNKGYDLSPTINTNGGIVTLPPTPKPEYQSTVSESIANFSTRTGEYAKPFQFLNLGILAYTGGGSALAQVPTGPNAEPIKGTGKIGNALWKSVYISKQVSWRNRFMVVNDWVRRQIFGRDITRL 544          
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|551548050|ref|XP_005761668.1| (hypothetical protein EMIHUDRAFT_428171 [Emiliania huxleyi CCMP1516] >gi|485610544|gb|EOD09239.1| hypothetical protein EMIHUDRAFT_428171 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 468.003 bits (1203), Expect = 1.046e-155
Identity = 254/535 (47.48%), Postives = 331/535 (61.87%), Query Frame = 0
Query:  111 SKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRR-RVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVINDKPLPANAQAASQQGFFLGRLLS-KNIDFTRSIPERTGPITTPGE------LLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAV----DKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 633
            SK    L K+  ++ F+  + +  LDD+               FR   +  G   +  R R+VVLG+GWGA+A L  +     +V VVSPRN+ LFTPMLAG+A+GT+E  SI EPIR  NP A Y EA  T ++   K +TC+SV+CEG SC++ +FE+PYD+L+VAVGA+TNT+G+ GVKE+C F+KQ++DA+  R  +G AFE+A+LPGLS+ QR + LTFV++GAGPTGVE   ELRDFV +DVP+ Y  L  FVR+ L+EASD+VL  FD  LQ  A+++L     +  EQG+      +V L  GV+EV   +++LSDG S+ Y L++WAAG G L  V    + LP Q       RGRL  D WLRV GA GV A GDC  +   P PA AQ ASQ G +LGRL++          P +  P   PGE      L S+   +E     A  F FLNLG LAY G   AL QIAV      + +K +GEAGF LWRSVYLSKQ  LRNR LV  DW K+R++GRDL+R 
Sbjct:   29 SKAWSTLEKDADWLGFVGGRCLDALDDSL--------------FRGGYLSSGSPPQGQRPRVVVLGSGWGANAVLSQLKNAACDVTVVSPRNYFLFTPMLAGAALGTLEPRSIIEPIREANPTATYFEAEATAIDTVSKVVTCESVVCEGVSCELRDFEVPYDLLVVAVGASTNTFGVKGVKEHCLFMKQLSDAIAFREQLGYAFEQASLPGLSEEQRREKLTFVVIGAGPTGVELCGELRDFVAQDVPRLYEDLQRFVRVVLLEASDKVLMAFDGDLQEAALQKL-----RSDEQGI----AIDVRLSAGVREVTEEEVLLSDGSSIRYALSLWAAGIGTLDFVRRTAEALPAQAAHADEARGRLAVDSWLRVAGAPGVFAFGDCAHVVGSPYPATAQVASQAGTYLGRLVADGYDFGGGDGPPKLTP-GAPGERTLRHGLSSLARSKEG---LAPPFTFLNLGILAYVGKSEALVQIAVGGDEGGKKVKGAGEAGFALWRSVYLSKQYGLRNRILVAVDWAKARVFGRDLSRL 536          
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|397643426|gb|EJK75857.1| (hypothetical protein THAOC_02409 [Thalassiosira oceanica])

HSP 1 Score: 469.544 bits (1207), Expect = 2.694e-155
Identity = 251/544 (46.14%), Postives = 347/544 (63.79%), Query Frame = 0
Query:  114 IQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQL--PEQEEKQAFGRGRLVTDEWLRVKGAEG-VLAIGDCCVINDKP-LPANAQAASQQGFFLGRLLSKNIDFTRSIPERTGPITTPGELLSVGEKR---ENGKIYAKG-------FQFLNLGTLAYTGGDSALAQIAV------------DKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLT 631
            + +LT ERPY  FL+EK + + +    SL   + AP                  ++ +VVLGTGWGA AFL+++D  KY V V+SPRN+ +FTPMLAG++VGTV+F SITEPIR +N    YLEA  T ++    +I+C S++CEGNSC+ E F++ YD LL +VGA T T+G PGV+EYC++LKQ+ DA +++ +I N FE A LP L+D  + + LTFVIVGAGPTG+EF AEL DF+EED  ++Y  LLPFVRIK+VEA+  +L  F++ ++ EA+++LT   +K+  +G+      E+LL   V EV    +   DG  +PYG+A+WAAG GPLP+ +++++ L   EQ+E Q F RGRL  D WLRV G EG V A+GDC  ++  P LPA AQ ASQQG FLG+LLSK+      +  +TG +  P  +L  G+ R   E    +A G       FQ+L+LG LAYTG  SALAQ+ V            +   ++  G  GF LWRS+YL KQ S +N  LV  DW+K +L+GRD++
Sbjct:   84 LDKLTAERPYPIFLAEKTLGLFESPS-SLPPPMNAP-----------------PKEELVVLGTGWGAAAFLKNIDTDKYHVTVISPRNYFVFTPMLAGASVGTVDFKSITEPIREINSKVRYLEAAATEIDPKTNTISCISIVCEGNSCETEMFDVNYDRLLFSVGAQTTTFGTPGVEEYCNYLKQVGDAQQIKNAIVNCFESAGLPNLTDEDKQKELTFVIVGAGPTGIEFAAELLDFIEEDGRRYYKDLLPFVRIKIVEAAPSILRPFEDGMKDEAIRKLT---RKIEIEGVQTLQPLEILLNKLVSEVSANYVYFKDGEKIPYGMALWAAGIGPLPITTSMVESLDDTEQKEAQDFARGRLGVDPWLRVIGGEGKVFALGDCSCVSSTPMLPATAQVASQQGEFLGKLLSKDY----CVDAKTGGVIIPPMMLDEGQSRSLSERIASFATGEKNIAAPFQYLDLGILAYTGSGSALAQLQVAPGKGDPSSETWNPVRLQIKGALGFGLWRSIYLWKQTSPKNVVLVTLDWLKVKLFGRDIS 602          
BLAST of EWM29632.1 vs. NCBI_GenBank
Match: gi|545705092|ref|XP_005704867.1| (NADH dehydrogenase isoform 1 [Galdieria sulphuraria] >gi|452821315|gb|EME28347.1| NADH dehydrogenase isoform 1 [Galdieria sulphuraria])

HSP 1 Score: 430.254 bits (1105), Expect = 1.033e-140
Identity = 229/547 (41.86%), Postives = 319/547 (58.32%), Query Frame = 0
Query:   89 KNTGPQSEPPSPSTGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAP--DPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFTRSIPERTGPITTPGELLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKRAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 633
            K   PQ +P           E S        E  +   +  + V  +DD  +    +   P  DP             +  +  +V+LGTGW AH+ ++ +D VKY+V VVSPRN+ LFTPML  +AVGTVEF SI E  R  NP+ DY EA C  V+  ++   C+S I      +  +F++ YD L++AVGA TNT+G PGV+E+C+FLK+I+DA  LR +I   FE A+ P +S  ++ + L+FV+VG GPTG EF AEL DF+ +D+ K+YP L   V++ L+++ D +LT FD  LQ +A++   ++               +V+ K  V EV +  I L DG+ +PYGLAVWAAGNG  PL   L+ ++PEQ+E     RGRL+ D WLRVKGA  V A+GDC  +   PLPA AQ A QQG +L RL +++   +  +PE     T P      G   E     AK FQFL+LG LAY G + A+AQI      IK +G   +LLW+SVY++KQVS RNR LV FDW K+R++GRD+++F
Sbjct:   46 KTPTPQKDPVQEKNQTKRSNETS------VNEDSFFSLILNRVVDTVDDAMVHFNRTFFPPKIDP-------------QAKKPTLVILGTGWAAHSLIKVIDTVKYDVRVVSPRNYFLFTPMLPSTAVGTVEFRSIVETFRTANPFVDYFEAHCVDVDLQKQVAVCESNI----PGEKRKFQIFYDYLVIAVGAATNTFGTPGVQEHCYFLKEISDARGLRRAIVERFELASFPDISKEEKCRLLSFVVVGGGPTGCEFAAELHDFLVQDLKKYYPKLFGDVQVLLLQSGDSILTQFDRTLQEKALENFRQS-------------NIQVITKARVTEVTSTHIRLVDGKEIPYGLAVWAAGNGTQPLTRLLLSKIPEQKE----ARGRLLVDSWLRVKGALNVFAVGDCAAMEPVPLPATAQVAGQQGAYLARLFNRDYCLSCPVPESEEKSTAPLAKWRPGGSPE----VAKPFQFLSLGILAYIGRERAMAQIETGLEKIKMAGVLTYLLWQSVYITKQVSFRNRVLVLFDWFKTRVFGRDMSQF 548          
The following BLAST results are available for this feature:
BLAST of EWM29632.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112204|gb|EWM29632.1|0.000e+0100.00Pyridine nucleotide-disulfide oxidoreductase, FAD/... [more]
gi|299473176|emb|CBN78752.1|0.000e+054.89NADH dehydrogenase (ubiquinone) [Ectocarpus silicu... [more]
gi|873233451|emb|CEM03292.1|0.000e+053.05unnamed protein product [Vitrella brassicaformis C... [more]
gi|219117515|ref|XP_002179552.1|0.000e+052.05predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210517176|dbj|GAX23811.1|0.000e+051.54NADH dehydrogenase [Fistulifera solaris][more]
gi|1210522911|dbj|GAX18254.1|2.859e-17851.49NADH dehydrogenase [Fistulifera solaris][more]
gi|1072237409|gb|OEU22136.1|5.035e-17749.18hypothetical protein FRACYDRAFT_205063 [Fragilario... [more]
gi|551548050|ref|XP_005761668.1|1.046e-15547.48hypothetical protein EMIHUDRAFT_428171 [Emiliania ... [more]
gi|397643426|gb|EJK75857.1|2.694e-15546.14hypothetical protein THAOC_02409 [Thalassiosira oc... [more]
gi|545705092|ref|XP_005704867.1|1.033e-14041.86NADH dehydrogenase isoform 1 [Galdieria sulphurari... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1038rna1038Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications