rna10274, rna10274 (mRNA) Nannochloropsis gaditana

Overview
Namerna10274
Unique Namerna10274
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1253
Alignment locationKK037269.1:7087..7287 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101496g1.5520.mrna
Orig protein idgnl|cribi|Naga_101496g1.5520
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037269.1supercontigKK037269.1:7087..7287 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101496g1gene9977Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10274rna10274-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20429.1cds10243Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10274 ID=rna10274|Name=rna10274|organism=Nannochloropsis gaditana|type=mRNA|length=1253bp
ATTTAAGGCTTCGACTATGCGGGGGTAATTTTCGCTTAAACCCGGCTTAG
CGGGGTTTGAGCTCAACCCATACCTGGGAAGATCAAACCTGAAAATCACT
TATCATAATCTAATGATATCAAAGCATACAAGCAGTCAGTCACCTCCAGA
TGCTCGAAGACACCAAAGATTGACACAAAGATACGTTATTTTTTAATTTT
ATTCGGAGAGCACAGGGGTCTCAACTTATGTCGGGCATTTTACCGGCTTC
TATACCCGTGGAACCCCCATCAAACCCTCACCCTTTCCAAAAACGTGGTT
CGCTTCCAGGCCGTAATCTAACCAAACCGGAATGGGGAGAAATTCAGGAT
CCGAGCGAGTTGGCGGAAGCACAGGAAAAGTACTGGAGCTGGGCTAGCTC
TCTAGCTAGGAAACTAGATGAGCGTGCGAGCGTATCTTCGCTGGATGACC
ATCCCACTGCTGAAATCGAACGTTCCACTGCAGTGGTCAATGGACTTGAG
GGCTGCATTTTCGTCGGGCACACAAATACAGACATGGACAGCGTGGCGAG
TGCCATTGGCGCTGCATATTTGTTCAACGGCACGGCTGCGCGCGCCGAGG
AGTCACTGAACGGTGAAATCACATTTGCATTGGAATACGCAGGTTATCAA
TCCTGGTTACGCGAGGAAGGAAGGCAGATGCCCGGGGCCATTCTCGGTGG
GGACGAAGAAGGGCTGCCTCCCTTTTTCCCACGCATCCCAGGCGCGACGG
ACCCTTTTAGCGACCGAGGAATCTGCCTGGTCGATTGCAACGCCCCTGAA
CAAATGGTCGCGGAGGTCGGGGCGGTGGCCTTCCCACCTCCCTCGACGGC
GGAGGAGGAGACGATCCCGCGGGCAATGGCAATGAGGAGAAGGATTCGAG
GCATCATCGACCACCACGCCCTCGCCGACACAATCTCCACTCTCGGACCC
ATATTCCTGGATGTTCGACCATGGGGCTCAGCCTGCACCATCATCGCTCA
TACCTATATCAGGATGGCGAGGCCCTTCCCTCTCTACGTCGCGCGCCTCC
TCCTCTGCGGAATTTTGTCAGACACAGTCAACCTGACCTCCCCCACCACT
ACTGTAGCAGACCGCATGCTTGCCTCCCTCCTTATCTTCTACGCGAAAGA
GACGCGTGTCAATACGCTTGCTACAGACATGTTTCGAGCCAAGTCCGCCT
TCCTCACCAACCTATCGCCTTTTGAAATGGTGCCTCCCTCCCACCTTTCC
CCT
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protein sequence of rna10274

>rna10274-protein ID=rna10274-protein|Name=rna10274|organism=Nannochloropsis gaditana|type=polypeptide|length=66bp
MYRFYSSPRGGPQQRVARPLGGIGGGRSRGRGRRRRDETYLCAWTCLFLI
AALFAAFRIMIRAHSE
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mRNA from alignment at KK037269.1:7087..7287+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10274 ID=rna10274|Name=rna10274|organism=Nannochloropsis gaditana|type=mRNA|length=201bp|location=Sequence derived from alignment at KK037269.1:7087..7287+ (Nannochloropsis gaditana)
ATGTACAGATTTtattcctcccctcgcggAGGTCCTCAGCAGCGGGTGGC
GCGTCCCCTCGGAGGTATTGGCGGAGGTcgcagcagaggaaggggccgta
GACGTAGAGACGAAACATACTTGTGTGCCTGGACATGCTTGTTCCTTATT
GCGGCACTATTCGCTGCCTTCCGCATCATGATTAGGGCCCACAGCGAATG
A
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Coding sequence (CDS) from alignment at KK037269.1:7087..7287+

>rna10274 ID=rna10274|Name=rna10274|organism=Nannochloropsis gaditana|type=CDS|length=201bp|location=Sequence derived from alignment at KK037269.1:7087..7287+ (Nannochloropsis gaditana)
ATGTACAGATTTtattcctcccctcgcggAGGTCCTCAGCAGCGGGTGGC
GCGTCCCCTCGGAGGTATTGGCGGAGGTcgcagcagaggaaggggccgta
GACGTAGAGACGAAACATACTTGTGTGCCTGGACATGCTTGTTCCTTATT
GCGGCACTATTCGCTGCCTTCCGCATCATGATTAGGGCCCACAGCGAATG
A
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Synonyms
Publications