EWM20429.1, cds10243 (CDS) Nannochloropsis gaditana

Overview
NameEWM20429.1
Unique Namecds10243
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037269.1:7087..7287 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20429.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101496g1.5520.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037269.1supercontigKK037269.1:7087..7287 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM20429.1 vs. NCBI_GenBank
Match: gi|585100028|gb|EWM20429.1| (hypothetical protein Naga_101496g1 [Nannochloropsis gaditana])

HSP 1 Score: 133.265 bits (334), Expect = 1.573e-39
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MYRFYSSPRGGPQQRVARPLGGIGGGRSRGRGRRRRDETYLCAWTCLFLIAALFAAFRIMIRAHSE 66
            MYRFYSSPRGGPQQRVARPLGGIGGGRSRGRGRRRRDETYLCAWTCLFLIAALFAAFRIMIRAHSE
Sbjct:    1 MYRFYSSPRGGPQQRVARPLGGIGGGRSRGRGRRRRDETYLCAWTCLFLIAALFAAFRIMIRAHSE 66
The following BLAST results are available for this feature:
BLAST of EWM20429.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100028|gb|EWM20429.1|1.573e-39100.00hypothetical protein Naga_101496g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10274rna10274Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications