rna10267, rna10267 (mRNA) Nannochloropsis gaditana

Overview
Namerna10267
Unique Namerna10267
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1101
Alignment locationKK037268.1:30865..31520 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101358g2.2740.mrna
Orig protein idgnl|cribi|Naga_101358g2.2740
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:30865..31520 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101358g2gene9970Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20437.1cds10236Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10267rna10267-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10267 ID=rna10267|Name=rna10267|organism=Nannochloropsis gaditana|type=mRNA|length=1101bp
GAAGAGAGGGGTGTGTAGAGGAGCTAAACATTTGAACGCGAGCATTTTGA
CGTTCCTGACCTTCCTCCCTCCCCTCTCTTTTTCCCTTTCTCCCTCCCTC
CTTCCCTCCCTCCCTCCTTCCTCGAGGCTCCCCTTTCCCCCCTCCCTCCC
TCCCTTCCATCCAAATGGCAACAATCGGTGGGAGACTTCCTGCGGGTGAC
ACTCCAGTGCTCGTCCTGGCTGGATGAGGAGAAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGGGGGAGGGAGCACCCTCTCGGCTCCTGTGGTTGTTG
GGGTACACGTTGGACTTTGTCCTGTACCCCTTGACAGACGACGAGGAAAA
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGGGCGAGGA
GGTGGAAGCCGCTAATCTTGGAAACAGACGGGCCTTATCATTTTCTACGG
CAGGAGGGAGAAGGAGGGAAGAAAGGAGGACGGCGGAAAGGGGGTCGAGG
GAGGAATCGACGGAGGGAGGGAGGGAGGGGGGGTTAGGAATGCTGGGGCC
GACGCGTTTAAAGCACCGGGTGTTGAGCTCTCTCTGTGAAGGGGACGACA
GGATGTGGGAGGCCTTCGTCTCCATCTCGTGCGCTGAGTGGGAGGAGGCG
GGGAAGGAGGGCGAGGGTGAGGGAGGGGCCGAGGAAGGGAGGAAACGCCT
TGTCTTCCGAAAACTACGCGAGCAAGGGGTGGATCCGCGAATTTATTTTG
CATCTTGTGAGGAGAAATTTGACGCAGGTGTTACGGGCGAGGAGAGTGAG
TGTAAGCGCAAGTAGCCTCGGAACCGCCGAGGGCCCAAGCAAAGCGCTTT
TACGGCGGGAGGATGCTCTGCGCCCGGGAAGGAGGGAGGGGAGAGGCTTC
TACATTCATCAGGTGGAAGTGTATGATTAGGAGCGCGTTGATTGTTATGA
TTCAAAGCACCCCCGTAGGGACCTGGAGGTCGGTATTCATACAGGGGGAT
GATCATTGCACATGGATCTGAACGAGCCGTGGGATGGCACGTTGGAACCA
GGGTGCCAAGTCAAAGTAAGCACAAAAAACAGACATGTTTCTTCAGTCTC
A
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protein sequence of rna10267

>rna10267-protein ID=rna10267-protein|Name=rna10267|organism=Nannochloropsis gaditana|type=polypeptide|length=128bp
MSLLHVKPTTREHLAVVLAFRHLPLNSLPQCRGRRAYEPKETVDCIRIGL
PCLPGFVHTLRPSLGLLLLLAPSMLTPGKGDSPSVRLHLHPCHFQLAASG
RVRRNIEKGVGRVRAPCNDSGPWSGKTR
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mRNA from alignment at KK037268.1:30865..31520-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10267 ID=rna10267|Name=rna10267|organism=Nannochloropsis gaditana|type=mRNA|length=656bp|location=Sequence derived from alignment at KK037268.1:30865..31520- (Nannochloropsis gaditana)
GGTTTGCCGGTCAAATAGGCATGGAGTTGGGGGAACGTGCGGCGGTAGGG CGCTGAGGACGTTGTGACATGGTCTGGTCGACTTTGTGGGTGCATGGAGG GGGAGAATGGTCGCGGGCATTACGATGCGATGTCCTGGCTTCACGCTCCT GACCCGCGGCACCACGTCTCTCGTGATCTCAGGCCGTTTTTCCGTTCGAC AGTCCATTGCTTAGTCAACAATCCAAGGCATCTACAATTGTCAATTCACG CTTCGTCTCCATTGAAGCCCGATGTCCTTGTTGCATGTTAAGCCAACCAC TAGGGAGCACCTTGCAGTCGTCCTCGCTTTCCGACACCTGCCGTTAAATT CCCTCCCCCAATGCAGGGGACGCAGAGCTTATGAACCGAAAGAGACCGTG GACTGTATTCGCATCGGCCTCCCATGTCTACCCGGCTTTGTCCATACTCT GCGTCCTTCCCTTGGTCTCCTCCTTCTTCTTGCGCCTTCCATGCTCACCC CCGGGAAGGGAGATAGCCCTTCCGTACGCCTCCATCTCCACCCCTGTCAC TTCCAACTGGCAGCATCTGGACGCGTACGGAGAAATATTGAAAAAGGTGT GGGGAGGGTGAGAGCGCCGTGCAACGACTCGGGGCCTTGGAGCGGTAAGA CCCGGG
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Coding sequence (CDS) from alignment at KK037268.1:30865..31520-

>rna10267 ID=rna10267|Name=rna10267|organism=Nannochloropsis gaditana|type=CDS|length=385bp|location=Sequence derived from alignment at KK037268.1:30865..31520- (Nannochloropsis gaditana)
ATGTCCTTGTTGCATGTTAAGCCAACCACTAGGGAGCACCTTGCAGTCGT
CCTCGCTTTCCGACACCTGCCGTTAAATTCCCTCCCCCAATGCAGGGGAC
GCAGAGCTTATGAACCGAAAGAGACCGTGGACTGTATTCGCATCGGCCTC
CCATGTCTACCCGGCTTTGTCCATACTCTGCGTCCTTCCCTTGGTCTCCT
CCTTCTTCTTGCGCCTTCCATGCTCACCCCCGGGAAGGGAGATAGCCCTT
CCGTACGCCTCCATCTCCACCCCTGTCACTTCCAACTGGCAGCATCTGGA
CGCGTACGGAGAAATATTGAAAAAGGTGTGGGGAGGGTGAGAGCGCCGTG
CAACGACTCGGGGCCTTGGAGCGGTAAGACCCGGG
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Synonyms
Publications