EWM20437.1, cds10236 (CDS) Nannochloropsis gaditana

Overview
NameEWM20437.1
Unique Namecds10236
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037268.1:30865..31249 -

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Properties
Property NameValue
Start range30865
Start range.
Protein idEWM20437.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101358g2.2740.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:30865..31249 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20437.1 vs. NCBI_GenBank
Match: gi|585100050|gb|EWM20437.1| (hypothetical protein Naga_101358g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 257.684 bits (657), Expect = 7.341e-87
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MSLLHVKPTTREHLAVVLAFRHLPLNSLPQCRGRRAYEPKETVDCIRIGLPCLPGFVHTLRPSLGLLLLLAPSMLTPGKGDSPSVRLHLHPCHFQLAASGRVRRNIEKGVGRVRAPCNDSGPWSGKTR 128
            MSLLHVKPTTREHLAVVLAFRHLPLNSLPQCRGRRAYEPKETVDCIRIGLPCLPGFVHTLRPSLGLLLLLAPSMLTPGKGDSPSVRLHLHPCHFQLAASGRVRRNIEKGVGRVRAPCNDSGPWSGKTR
Sbjct:    1 MSLLHVKPTTREHLAVVLAFRHLPLNSLPQCRGRRAYEPKETVDCIRIGLPCLPGFVHTLRPSLGLLLLLAPSMLTPGKGDSPSVRLHLHPCHFQLAASGRVRRNIEKGVGRVRAPCNDSGPWSGKTR 128
The following BLAST results are available for this feature:
BLAST of EWM20437.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100050|gb|EWM20437.1|7.341e-87100.00hypothetical protein Naga_101358g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10267rna10267Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications