rna10264, rna10264 (mRNA) Nannochloropsis gaditana

Overview
Namerna10264
Unique Namerna10264
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length321
Alignment locationKK037268.1:22726..23642 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101072g1.10028.mrna
Orig protein idgnl|cribi|Naga_101072g1.10028
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:22726..23642 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101072g1gene9967Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10264rna10264-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20442.1cds10233Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10264 ID=rna10264|Name=rna10264|organism=Nannochloropsis gaditana|type=mRNA|length=321bp
ATGAAACCAGAATTTTGGCCAGGGCCGGGGGCAGGACAGCGTGCGGCGCG
AGGTCTGGCTAATGAGTCTATTTTGGCTATGTATGCACTTTTTGGGGGCA
CACGCCCTACAGGCTATGCACTTTTCGACGCCCCACATCCGACACTCCAT
GGTAGCAATGCATACATTGTAGCGGGCTTTGCGCCGACAACACATGTTTT
CCCCGCCCAGAAATCTAAAGCTAGGGGGGCACATGATCGGTATCTAGCAT
TTCGAGTGTCGCCGTGGTATCCCTGGTATTCGCACCGTTTTTTTCTTTTC
CCCCATTACTACTTACGTTAA
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protein sequence of rna10264

>rna10264-protein ID=rna10264-protein|Name=rna10264|organism=Nannochloropsis gaditana|type=polypeptide|length=171bp
MEAVSSSDDQAAASDEGYETEEEEAPEPGGESPWKRRNNDAGEVAGLGEG
KGLEGENVEAKKRKREGCGGSTGERRARGVLDVVRRQMTGELPSSHPASR
NKAFALSTLPMEKLLGGRNGEGEVGGVREKESVLGAASGERRGGEGKVER
NKQERDKKTIARIKKLIKYRR
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mRNA from alignment at KK037268.1:22726..23642-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10264 ID=rna10264|Name=rna10264|organism=Nannochloropsis gaditana|type=mRNA|length=917bp|location=Sequence derived from alignment at KK037268.1:22726..23642- (Nannochloropsis gaditana)
ATGGAGGCCGTCTCTTCGTCCGACGACCAGGCCGCTGCCTCGGACGAGGG
CTACGAGACCGAGGAGGAGGAGGCGCCGGAGGTGAGGGAGGATAGGAGGG
AGGGAGGGCGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGCAGGGG
TGTCACGGGCTCTCAAGAGACTTGGGGCCCCATCCATCGAGGAGGCGGAC
GTGCGAGAATGCGAGGGCGGAGAAGGGTATCGACCTGTAGACGAATTTGC
AAAAGGCAGTTACTCGTCCTCCAAAACCCTGCTCCTGCCTTCCTCCCTTC
CCTTTTCCCTTTTCCCTCTTCTTCCACAGCCTGGCGGCGAATCTCCGTGG
AAACGACGAAACAACGACGCGGGCGAGGTTGCCGGGCTCGGGGAGGGAAA
AGGACTGGAAGGGGAAAATGTCGAGGCGAAGAAGAGGAAGAGGGAGGGTT
GTGGGGGTAGCACGGGGGAACGGAGGGCGAGAGGAGTCTTGGACGTGGTG
CGGCGCCAGAGTAAGTGGGCTCGGCTTTTCAGGGTGTTTTTCGGCATTTT
CTTAACGTTTTCTACCCTGTCATACACGCGTGCGTTTTTAAAAAACGAAA
GACATCCACTCCTCTTTCTCCCCCCTTCCTTCCGGACTCTCCCTCTTCTT
TTCTGTTCTTCAGTGACGGGAGAGCTCCCCTCTTCCCACCCTGCCTCGCG
GAATAAAGCCTTTGCCCTCAGCACCCTCCCCATGGAAAAGCTGCTGGGAG
GGAGGAATGGGGAGGGCGAAGTAGGAGGGGTAAGAGAGAAGGAGAGCGTT
CTGGGGGCGGCATCAGGGGAGAGGAGGGGTGGTGAAGGGAAGGTCGAGCG
CAACAAGCAGGAGCGAGACAAGAAAACGATTGCGCGGATTAAAAAGCTGA
TCAAATACAGACGTTGA
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Coding sequence (CDS) from alignment at KK037268.1:22726..23642-

>rna10264 ID=rna10264|Name=rna10264|organism=Nannochloropsis gaditana|type=CDS|length=1548bp|location=Sequence derived from alignment at KK037268.1:22726..23642- (Nannochloropsis gaditana)
TGACGGGAGAGCTCCCCTCTTCCCACCCTGCCTCGCGGAATAAAGCCTTT
GCCCTCAGCACCCTCCCCATGGAAAAGCTGCTGGGAGGGAGGAATGGGGA
GGGCGAAGTAGGAGGGGTAAGAGAGAAGGAGAGCGTTCTGGGGGCGGCAT
CAGGGGAGAGGAGGGGTGGTGAAGGGAAGGTCGAGCGCAACAAGCAGGAG
CGAGACAAGAAAACGATTGCGCGGATTAAAAAGCTGATCAAATACAGACG
TTGACCTGGCGGCGAATCTCCGTGGAAACGACGAAACAACGACGCGGGCG
AGGTTGCCGGGCTCGGGGAGGGAAAAGGACTGGAAGGGGAAAATGTCGAG
GCGAAGAAGAGGAAGAGGGAGGGTTGTGGGGGTAGCACGGGGGAACGGAG
GGCGAGAGGAGTCTTGGACGTGGTGCGGCGCCAGAATGGAGGCCGTCTCT
TCGTCCGACGACCAGGCCGCTGCCTCGGACGAGGGCTACGAGACCGAGGA
GGAGGAGGCGCCGGAGTGACGGGAGAGCTCCCCTCTTCCCACCCTGCCTC
GCGGAATAAAGCCTTTGCCCTCAGCACCCTCCCCATGGAAAAGCTGCTGG
GAGGGAGGAATGGGGAGGGCGAAGTAGGAGGGGTAAGAGAGAAGGAGAGC
GTTCTGGGGGCGGCATCAGGGGAGAGGAGGGGTGGTGAAGGGAAGGTCGA
GCGCAACAAGCAGGAGCGAGACAAGAAAACGATTGCGCGGATTAAAAAGC
TGATCAAATACAGACGTTGACCTGGCGGCGAATCTCCGTGGAAACGACGA
AACAACGACGCGGGCGAGGTTGCCGGGCTCGGGGAGGGAAAAGGACTGGA
AGGGGAAAATGTCGAGGCGAAGAAGAGGAAGAGGGAGGGTTGTGGGGGTA
GCACGGGGGAACGGAGGGCGAGAGGAGTCTTGGACGTGGTGCGGCGCCAG
AATGGAGGCCGTCTCTTCGTCCGACGACCAGGCCGCTGCCTCGGACGAGG
GCTACGAGACCGAGGAGGAGGAGGCGCCGGAGTGACGGGAGAGCTCCCCT
CTTCCCACCCTGCCTCGCGGAATAAAGCCTTTGCCCTCAGCACCCTCCCC
ATGGAAAAGCTGCTGGGAGGGAGGAATGGGGAGGGCGAAGTAGGAGGGGT
AAGAGAGAAGGAGAGCGTTCTGGGGGCGGCATCAGGGGAGAGGAGGGGTG
GTGAAGGGAAGGTCGAGCGCAACAAGCAGGAGCGAGACAAGAAAACGATT
GCGCGGATTAAAAAGCTGATCAAATACAGACGTTGACCTGGCGGCGAATC
TCCGTGGAAACGACGAAACAACGACGCGGGCGAGGTTGCCGGGCTCGGGG
AGGGAAAAGGACTGGAAGGGGAAAATGTCGAGGCGAAGAAGAGGAAGAGG
GAGGGTTGTGGGGGTAGCACGGGGGAACGGAGGGCGAGAGGAGTCTTGGA
CGTGGTGCGGCGCCAGAATGGAGGCCGTCTCTTCGTCCGACGACCAGGCC
GCTGCCTCGGACGAGGGCTACGAGACCGAGGAGGAGGAGGCGCCGGAG
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Synonyms
Publications